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Siglec-7 represents a glyco-immune checkpoint for non-exhausted effector memory CD8+ T cells with high functional and metabolic capacities.
Published in:
Frontiers in Immunology, 2022, v. 13, p. 1, doi. 10.3389/fimmu.2022.996746
By:
- Haas, Quentin;
- Markov, Nikita;
- Muerner, Lukas;
- Rubino, Viviana;
- Benjak, Andrej;
- Haubitz, Monika;
- Baerlocher, Gabriela M.;
- Ng, Charlotte K. Y.;
- Münz, Christian;
- Riether, Carsten;
- Ochsenbein, Adrian F.;
- Simon, Hans-Uwe;
- von Gunten, Stephan
Publication type:
Article
Gene expression patterns associated with multidrug therapy in multibacillary leprosy.
Published in:
Frontiers in Cellular & Infection Microbiology, 2022, v. 12, p. 1, doi. 10.3389/fcimb.2022.917282
By:
- Ferreira, Helen;
- Leal-Calvo, Thyago;
- Mendes, Mayara Abud;
- Avanzi, Charlotte;
- Busso, Philippe;
- Benjak, Andrej;
- Maria Sales, Anna;
- Porto Ferreira, Cássio;
- de Berrêdo-Pinho, Márcia;
- Thomas Cole, Stewart;
- Nunes Sarno, Euzenir;
- Ozório Moraes, Milton;
- Olmo Pinheiro, Roberta
Publication type:
Article
Essentiality of mmpL3 and impact of its silencing on Mycobacterium tuberculosis gene expression.
Published in:
Scientific Reports, 2017, p. 43495, doi. 10.1038/srep43495
By:
- Degiacomi, Giulia;
- Benjak, Andrej;
- Madacki, Jan;
- Boldrin, Francesca;
- Provvedi, Roberta;
- Palù, Giorgio;
- Kordulakova, Jana;
- Cole, Stewart T.;
- Manganelli, Riccardo
Publication type:
Article
Whole genome sequencing distinguishes between relapse and reinfection in recurrent leprosy cases.
Published in:
PLoS Neglected Tropical Diseases, 2017, v. 11, n. 6, p. 1, doi. 10.1371/journal.pntd.0005598
By:
- Stefani, Mariane M. A.;
- Avanzi, Charlotte;
- Bührer-Sékula, Samira;
- Benjak, Andrej;
- Loiseau, Chloé;
- Singh, Pushpendra;
- Pontes, Maria A. A.;
- Gonçalves, Heitor S.;
- Hungria, Emerith M.;
- Busso, Philippe;
- Piton, Jérémie;
- Silveira, Maria I. S.;
- Cruz, Rossilene;
- Schetinni, Antônio;
- Costa, Maurício B.;
- Virmond, Marcos C. L.;
- Diorio, Suzana M.;
- Dias-Baptista, Ida M. F.;
- Rosa, Patricia S.;
- Matsuoka, Masanori
Publication type:
Article
Genome-Wide Analysis of the "Cut-and-Paste" Transposons of Grapevine.
Published in:
PLoS ONE, 2008, v. 3, n. 9, p. 1, doi. 10.1371/journal.pone.0003107
By:
- Benjak, Andrej;
- Forneck, Astrid;
- Casacuberta, Josep M.
Publication type:
Article
Sequencing of 6.7 Mb of the melon genome using a BAC pooling strategy.
Published in:
BMC Plant Biology, 2010, v. 10, p. 246, doi. 10.1186/1471-2229-10-246
By:
- González, Víctor M;
- Benjak, Andrej;
- Hénaff, Elizabeth Marie;
- Mir, Gisela;
- Casacuberta, Josep M.;
- Garcia-Mas, Jordi;
- Puigdomènech, Pere
Publication type:
Article
Genomic and transcriptomic analysis of the streptomycin-dependent Mycobacterium tuberculosis strain 18b.
Published in:
BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2528-2
By:
- Benjak, Andrej;
- Uplekar, Swapna;
- Ming Zhang;
- Piton, Jérémie;
- Cole, Stewart T.;
- Sala, Claudia
Publication type:
Article
A new paradigm for leprosy diagnosis based on host gene expression.
Published in:
PLoS Pathogens, 2021, v. 17, n. 10, p. 1, doi. 10.1371/journal.ppat.1009972
By:
- Leal-Calvo, Thyago;
- Avanzi, Charlotte;
- Mendes, Mayara Abud;
- Benjak, Andrej;
- Busso, Philippe;
- Pinheiro, Roberta Olmo;
- Sarno, Euzenir Nunes;
- Cole, Stewart Thomas;
- Moraes, Milton Ozório
Publication type:
Article
EspL is essential for virulence and stabilizes EspE, EspF and EspH levels in Mycobacterium tuberculosis.
Published in:
PLoS Pathogens, 2018, v. 14, n. 12, p. 1, doi. 10.1371/journal.ppat.1007491
By:
- Sala, Claudia;
- Odermatt, Nina T.;
- Soler-Arnedo, Paloma;
- Gülen, Muhammet F.;
- von Schultz, Sofia;
- Benjak, Andrej;
- Cole, Stewart T.
Publication type:
Article
Multicenter analysis of sputum microbiota in tuberculosis patients.
Published in:
PLoS ONE, 2020, v. 15, n. 10, p. 1, doi. 10.1371/journal.pone.0240250
By:
- Sala, Claudia;
- Benjak, Andrej;
- Goletti, Delia;
- Banu, Sayera;
- Mazza-Stadler, Jesica;
- Jaton, Katia;
- Busso, Philippe;
- Remm, Sille;
- Leleu, Marion;
- Rougemont, Jacques;
- Palmieri, Fabrizio;
- Cuzzi, Gilda;
- Butera, Ornella;
- Vanini, Valentina;
- Kabir, Senjuti;
- Rahman, S. M. Mazidur;
- Nicod, Laurent;
- Cole, Stewart T.
Publication type:
Article
Lansoprazole is an antituberculous prodrug targeting cytochrome bc<sub>1</sub>.
Published in:
Nature Communications, 2015, v. 6, n. 7, p. 7659, doi. 10.1038/ncomms8659
By:
- Rybniker, Jan;
- Vocat, Anthony;
- Sala, Claudia;
- Busso, Philippe;
- Pojer, Florence;
- Benjak, Andrej;
- Cole, Stewart T.
Publication type:
Article
Recent amplification and impact of MITEs on the genome of grapevine (Vitis vinifera L.).
Published in:
Genome Biology & Evolution, 2009, v. 1, p. 75, doi. 10.1093/gbe/evp009
By:
- Benjak, Andrej;
- Boué, Stéphanie;
- Forneck, Astrid;
- Casacuberta, Josep M.
Publication type:
Article
Transmission of Drug-Resistant Leprosy in Guinea-Conakry Detected Using Molecular Epidemiological Approaches.
Published in:
Clinical Infectious Diseases, 2016, v. 63, n. 11, p. 1482, doi. 10.1093/cid/ciw572
By:
- Avanzi, Charlotte;
- Busso, Philippe;
- Benjak, Andrej;
- Loiseau, Chloé;
- Fomba, Abdoulaye;
- Doumbia, Glodia;
- Camara, Idrissa;
- Lamou, André;
- Sock, Gouressy;
- Drame, Tiguidanké;
- Kodio, Mamadou;
- Sakho, Fatoumata;
- Sow, Samba O.;
- Cole, Stewart T.;
- Johnson, Roch Christian
Publication type:
Article
The PhoP-Dependent ncRNA Mcr7 Modulates the TAT Secretion System in <i>Mycobacterium tuberculosis</i>.
Published in:
PLoS Pathogens, 2014, v. 10, n. 5, p. 1, doi. 10.1371/journal.ppat.1004183
By:
- Solans, Luis;
- Gonzalo-Asensio, Jesús;
- Sala, Claudia;
- Benjak, Andrej;
- Uplekar, Swapna;
- Rougemont, Jacques;
- Guilhot, Christophe;
- Malaga, Wladimir;
- Martín, Carlos;
- Cole, Stewart T.
Publication type:
Article
Genomic Characterization of Mycobacterium leprae to Explore Transmission Patterns Identifies New Subtype in Bangladesh.
Published in:
Frontiers in Microbiology, 2020, v. 11, p. 1, doi. 10.3389/fmicb.2020.01220
By:
- Tió-Coma, Maria;
- Avanzi, Charlotte;
- Verhard, Els M.;
- Pierneef, Louise;
- van Hooij, Anouk;
- Benjak, Andrej;
- Roy, Johan Chandra;
- Khatun, Marufa;
- Alam, Khorshed;
- Corstjens, Paul;
- Cole, Stewart T.;
- Richardus, Jan Hendrik;
- Geluk, Annemieke
Publication type:
Article
Phylogenomics and antimicrobial resistance of the leprosy bacillus Mycobacterium leprae.
Published in:
Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-017-02576-z
By:
- Benjak, Andrej;
- Avanzi, Charlotte;
- Singh, Pushpendra;
- Loiseau, Chloé;
- Girma, Selfu;
- Busso, Philippe;
- Brum Fontes, Amanda N.;
- Yuji Miyamoto;
- Masako Namisato;
- Bobosha, Kidist;
- Salgado, Claudio G.;
- da Silva, Moisés B.;
- Bouth, Raquel C.;
- Frade, Marco A. C.;
- Bernardes Filho, Fred;
- Barreto, Josafá G.;
- Nery, José A. C.;
- Bührer-Sékula, Samira;
- Lupien, Andréanne;
- Al-Samie, Abdul R.
Publication type:
Article
Essential Nucleoid Associated Protein mIHF (Rv1388) Controls Virulence and Housekeeping Genes in Mycobacterium tuberculosis.
Published in:
Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-32340-2
By:
- Odermatt, Nina T.;
- Sala, Claudia;
- Benjak, Andrej;
- Cole, Stewart T.
Publication type:
Article
Defining the nitrogen regulated transcriptome of Mycobacterium smegmatis using continuous culture.
Published in:
BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/s12864-015-2051-x
By:
- Petridis, Michael;
- Benjak, Andrej;
- M. Cook, Gregory
Publication type:
Article
Genome-wide BAC-end sequencing of Cucumis melo using two BAC libraries.
Published in:
BMC Genomics, 2010, v. 11, n. 1, p. 1, doi. 10.1186/1471-2164-11-618
By:
- González, Víctor M;
- Rodríguez-Moreno, Luis;
- Centeno, Emilio;
- Benjak, Andrej;
- Garcia-Mas, Jordi;
- Puigdomènech, Pere;
- Aranda, Miguel A
Publication type:
Article
Genome-wide BAC-end sequencing of Cucumis melo using two BAC libraries.
Published in:
BMC Genomics, 2010, v. 11, p. 618, doi. 10.1186/1471-2164-11-618
By:
- González, Víctor M.;
- Rodríguez-Moreno, Luis;
- Centeno, Emilio;
- Benjak, Andrej;
- Garcia-Mas, Jordi;
- Puigdomènech, Pere;
- Aranda, Miguel A.
Publication type:
Article
New 2-Ethylthio-4-methylaminoquinazoline derivatives inhibiting two subunits of cytochrome bc1 in Mycobacterium tuberculosis.
Published in:
PLoS Pathogens, 2020, v. 16, n. 1, p. 1, doi. 10.1371/journal.ppat.1008270
By:
- Lupien, Andréanne;
- Foo, Caroline Shi-Yan;
- Savina, Svetlana;
- Vocat, Anthony;
- Piton, Jérémie;
- Monakhova, Natalia;
- Benjak, Andrej;
- Lamprecht, Dirk A.;
- Steyn, Adrie J. C.;
- Pethe, Kevin;
- Makarov, Vadim A.;
- Cole, Stewart T.
Publication type:
Article
Population Genomics of Mycobacterium leprae Reveals a New Genotype in Madagascar and the Comoros.
Published in:
Frontiers in Microbiology, 2020, v. 11, p. 1, doi. 10.3389/fmicb.2020.00711
By:
- Avanzi, Charlotte;
- Lécorché, Emmanuel;
- Rakotomalala, Fetra Angelot;
- Benjak, Andrej;
- Rapelanoro Rabenja, Fahafahantsoa;
- Ramarozatovo, Lala S.;
- Cauchoix, Bertrand;
- Rakoto-Andrianarivelo, Mala;
- Tió-Coma, Maria;
- Leal-Calvo, Thyago;
- Busso, Philippe;
- Boy-Röttger, Stefanie;
- Chauffour, Aurélie;
- Rasamoelina, Tahinamandrato;
- Andrianarison, Aina;
- Sendrasoa, Fandresena;
- Spencer, John S.;
- Singh, Pushpendra;
- Dashatwar, Digambar Ramchandra;
- Narang, Rahul
Publication type:
Article
Patient-derived xenografts and organoids model therapy response in prostate cancer.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-21300-6
By:
- Karkampouna, Sofia;
- La Manna, Federico;
- Benjak, Andrej;
- Kiener, Mirjam;
- De Menna, Marta;
- Zoni, Eugenio;
- Grosjean, Joël;
- Klima, Irena;
- Garofoli, Andrea;
- Bolis, Marco;
- Vallerga, Arianna;
- Theurillat, Jean-Philippe;
- De Filippo, Maria R.;
- Genitsch, Vera;
- Keller, David;
- Booij, Tijmen H.;
- Stirnimann, Christian U.;
- Eng, Kenneth;
- Sboner, Andrea;
- Ng, Charlotte K. Y.
Publication type:
Article

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