Found: 25

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  • NCBI GEO: archive for functional genomics data sets--update.

    Published in:
    Nucleic Acids Research, 2013, v. 41, p. D991, doi. 10.1093/nar/gks1193
    By:
    • Barrett, Tanya;
    • Wilhite, Stephen E.;
    • Ledoux, Pierre;
    • Evangelista, Carlos;
    • Kim, Irene F.;
    • Tomashevsky, Maxim;
    • Marshall, Kimberly A.;
    • Phillippy, Katherine H.;
    • Sherman, Patti M.;
    • Holko, Michelle;
    • Yefanov, Andrey;
    • Lee, Hyeseung;
    • Zhang, Naigong;
    • Robertson, Cynthia L.;
    • Serova, Nadezhda;
    • Davis, Sean;
    • Soboleva, Alexandra
    Publication type:
    Article

  • BioProject and BioSample databases at NCBI: facilitating capture and organization of metadata.

    Published in:
    Nucleic Acids Research, 2012, p. D57, doi. 10.1093/nar/gkr1163
    By:
    • Barrett, Tanya;
    • Clark, Karen;
    • Gevorgyan, Robert;
    • Gorelenkov, Vyacheslav;
    • Gribov, Eugene;
    • Karsch-Mizrachi, Ilene;
    • Kimelman, Michael;
    • Pruitt, Kim D.;
    • Resenchuk, Sergei;
    • Tatusova, Tatiana;
    • Yaschenko, Eugene;
    • Ostell, James
    Publication type:
    Article

  • Database resources of the National Center for Biotechnology Information.

    Published in:
    Nucleic Acids Research, 2012, p. D13, doi. 10.1093/nar/gkr1184
    By:
    • Sayers, Eric W.;
    • Barrett, Tanya;
    • Benson, Dennis A.;
    • Bolton, Evan;
    • Bryant, Stephen H.;
    • Canese, Kathi;
    • Chetvernin, Vyacheslav;
    • Church, Deanna M.;
    • DiCuccio, Michael;
    • Federhen, Scott;
    • Feolo, Michael;
    • Fingerman, Ian M.;
    • Geer, Lewis Y.;
    • Helmberg, Wolfgang;
    • Kapustin, Yuri;
    • Krasnov, Sergey;
    • Landsman, David;
    • Lipman, David J.;
    • Lu, Zhiyong;
    • Madden, Thomas L.
    Publication type:
    Article

  • NCBI GEO: archive for functional genomics data sets—10 years on.

    Published in:
    Nucleic Acids Research, 2011, v. 39, n. suppl_1, p. D1005, doi. 10.1093/nar/gkq1184
    By:
    • Barrett, Tanya;
    • Troup, Dennis B.;
    • Wilhite, Stephen E.;
    • Ledoux, Pierre;
    • Evangelista, Carlos;
    • Kim, Irene F.;
    • Tomashevsky, Maxim;
    • Marshall, Kimberly A.;
    • Phillippy, Katherine H.;
    • Sherman, Patti M.;
    • Muertter, Rolf N.;
    • Holko, Michelle;
    • Ayanbule, Oluwabukunmi;
    • Yefanov, Andrey;
    • Soboleva, Alexandra
    Publication type:
    Article

  • Database resources of the National Center for Biotechnology Information.

    Published in:
    Nucleic Acids Research, 2011, v. 39, n. suppl_1, p. D38, doi. 10.1093/nar/gkq1172
    By:
    • Sayers, Eric W.;
    • Barrett, Tanya;
    • Benson, Dennis A.;
    • Bolton, Evan;
    • Bryant, Stephen H.;
    • Canese, Kathi;
    • Chetvernin, Vyacheslav;
    • Church, Deanna M.;
    • DiCuccio, Michael;
    • Federhen, Scott;
    • Feolo, Michael;
    • Fingerman, Ian M.;
    • Geer, Lewis Y.;
    • Helmberg, Wolfgang;
    • Kapustin, Yuri;
    • Landsman, David;
    • Lipman, David J.;
    • Lu, Zhiyong;
    • Madden, Thomas L.;
    • Madej, Tom
    Publication type:
    Article

  • NCBI Peptidome: a new repository for mass spectrometry proteomics data.

    Published in:
    Nucleic Acids Research, 2010, v. 38, p. D731, doi. 10.1093/nar/gkp1047
    By:
    • Li Ji;
    • Barrett, Tanya;
    • Ayanbule, Oluwabukunmi;
    • Troup, Dennis B.;
    • Rudnev, Dmitry;
    • Muertter, Rolf N.;
    • Tomashevsky, Maxim;
    • Soboleva, Alexandra;
    • Slotta, Douglas J.
    Publication type:
    Article

  • Database resources of the National Center for Biotechnology Information.

    Published in:
    Nucleic Acids Research, 2009, v. 37, n. 9, p. 3124, doi. 10.1093/nar/gkp382
    By:
    • Sayers, Eric W.;
    • Barrett, Tanya;
    • Benson, Dennis A.;
    • Bryant, Stephen H.;
    • Canese, Kathi;
    • Chetvernin, Vyacheslav;
    • Church, Deanna M.;
    • DiCuccio, Michael;
    • Edgar, Ron;
    • Federhen, Scott;
    • Feolo, Michael;
    • Geer, Lewis Y.;
    • Helmberg, Wolfgang;
    • Kapustin, Yuri;
    • Landsman, David;
    • Lipman, David J.;
    • Madden, Thomas L.;
    • Maglott, Donna R.;
    • Miller, Vadim;
    • Mizrachi, Ilene
    Publication type:
    Article

  • NCBI GEO: archive for high-throughput functional genomic data.

    Published in:
    Nucleic Acids Research, 2009, v. 37, n. suppl_1, p. D885, doi. 10.1093/nar/gkn764
    By:
    • Barrett, Tanya;
    • Troup, Dennis B.;
    • Wilhite, Stephen E.;
    • Ledoux, Pierre;
    • Rudnev, Dmitry;
    • Evangelista, Carlos;
    • Kim, Irene F.;
    • Soboleva, Alexandra;
    • Tomashevsky, Maxim;
    • Marshall, Kimberly A.;
    • Phillippy, Katherine H.;
    • Sherman, Patti M.;
    • Muertter, Rolf N.;
    • Edgar, Ron
    Publication type:
    Article

  • Database resources of the National Center for Biotechnology Information.

    Published in:
    Nucleic Acids Research, 2009, v. 37, n. suppl_1, p. D5, doi. 10.1093/nar/gkn741
    By:
    • Sayers, Eric W.;
    • Barrett, Tanya;
    • Benson, Dennis A.;
    • Bryant, Stephen H.;
    • Canese, Kathi;
    • Chetvernin, Vyacheslav;
    • Church, Deanna M.;
    • DiCuccio, Michael;
    • Edgar, Ron;
    • Federhen, Scott;
    • Feolo, Michael;
    • Geer, Lewis Y.;
    • Helmberg, Wolfgang;
    • Kapustin, Yuri;
    • Landsman, David;
    • Lipman, David J.;
    • Madden, Thomas L.;
    • Maglott, Donna R.;
    • Miller, Vadim;
    • Mizrachi, Ilene
    Publication type:
    Article

  • Database resources of the National Center for Biotechnology Information.

    Published in:
    Nucleic Acids Research, 2008, v. 36, p. D13
    By:
    • Wheeler, David L.;
    • Barrett, Tanya;
    • Benson, Dennis A.;
    • Bryant, Stephen H.;
    • Canese, Kathi;
    • Chetvernin, Vyacheslav;
    • Church, Deanna M.;
    • DiCuccio, Michael;
    • Edgar, Ron;
    • Federhen, Scott;
    • Feolo, Michael;
    • Geer, Lewis Y.;
    • Helmberg, Wolfgang;
    • Kapustin, Yuri;
    • Khovayko, Oleg;
    • Landsman, David;
    • Lipman, David J.;
    • Madden, Thomas L.;
    • Maglott, Donna R.;
    • Miller, Vadim
    Publication type:
    Article

  • NCBI GEO: mining tens of millions of expression profiles—database and tools update.

    Published in:
    Nucleic Acids Research, 2007, v. 35, p. d760, doi. 10.1093/nar/gkl887
    By:
    • Barrett, Tanya;
    • Troup, Dennis B.;
    • Wilhite, Stephen E.;
    • Ledoux, Pierre;
    • Rudnev, Dmitry;
    • Evangelista, Carlos;
    • Kim, Irene F.;
    • Soboleva, Alexandra;
    • Tomashevsky, Maxim;
    • Edgar, Ron
    Publication type:
    Article

  • Database resources of the National Center for Biotechnology Information.

    Published in:
    Nucleic Acids Research, 2007, v. 35, p. d5, doi. 10.1093/nar/gkl1031
    By:
    • Wheeler, David L.;
    • Barrett, Tanya;
    • Benson, Dennis A.;
    • Bryant, Stephen H.;
    • Canese, Kathi;
    • Chetvernin, Vyacheslav;
    • Church, Deanna M.;
    • DiCuccio, Michael;
    • Edgar, Ron;
    • Federhen, Scott;
    • Geer, Lewis Y.;
    • Kapustin, Yuri;
    • Khovayko, Oleg;
    • Landsman, David;
    • Lipman, David J.;
    • Madden, Thomas L.;
    • Maglott, Donna R.;
    • Ostell, James;
    • Miller, Vadim;
    • Pruitt, Kim D.
    Publication type:
    Article

  • NCBI Peptidome: a new public repository for mass spectrometry peptide identifications.

    Published in:
    2009
    By:
    • Slotta, Douglas J.;
    • Barrett, Tanya;
    • Edgar, Ron
    Publication type:
    Letter

  • NCBI GEO standards and services for microarray data.

    Published in:
    2006
    By:
    • Edgar, Ron;
    • Barrett, Tanya
    Publication type:
    Letter

  • Reannotation of array probes at NCBI's GEO database.

    Published in:
    2008
    By:
    • Barrett, Tanya;
    • Edgar, Ron
    Publication type:
    Letter

  • Description of Repetition Strain Injury, and Prevention.

    Published in:
    Australian Occupational Therapy Journal, 1985, v. 32, n. 3, p. 113, doi. 10.1111/j.1440-1630.1985.tb01505.x
    By:
    • Barrett, Tanya
    Publication type:
    Article

  • Toward richer metadata for microbial sequences: replacing strain-level NCBI taxonomy taxids with BioProject, BioSample and Assembly records.

    Published in:
    Standards in Genomic Sciences, 2014, v. 9, n. 3, p. 1275, doi. 10.4056/sigs.4851102
    By:
    • Federhen, Scott;
    • Clark, Karen;
    • Barrett, Tanya;
    • Parkinson, Helen;
    • Ostell, James;
    • Kodama, Yuichi;
    • Mashima, Jun;
    • Nakamura, Yasukazu;
    • Cochrane, Guy;
    • Karsch-Mizrachi, Ilene
    Publication type:
    Article

  • Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package.

    Published in:
    GigaScience, 2022, v. 11, p. 1, doi. 10.1093/gigascience/giac003
    By:
    • Griffiths, Emma J;
    • Timme, Ruth E;
    • Mendes, Catarina Inês;
    • Page, Andrew J;
    • Alikhan, Nabil-Fareed;
    • Fornika, Dan;
    • Maguire, Finlay;
    • Campos, Josefina;
    • Park, Daniel;
    • Olawoye, Idowu B;
    • Oluniyi, Paul E;
    • Anderson, Dominique;
    • Christoffels, Alan;
    • da Silva, Anders Gonçalves;
    • Cameron, Rhiannon;
    • Dooley, Damion;
    • Katz, Lee S;
    • Black, Allison;
    • Karsch-Mizrachi, Ilene;
    • Barrett, Tanya
    Publication type:
    Article

  • Standardized Metadata for Human Pathogen/Vector Genomic Sequences.

    Published in:
    PLoS ONE, 2014, v. 9, n. 6, p. 1, doi. 10.1371/journal.pone.0099979
    By:
    • Dugan, Vivien G.;
    • Emrich, Scott J.;
    • Giraldo-Calderón, Gloria I.;
    • Harb, Omar S.;
    • Newman, Ruchi M.;
    • Pickett, Brett E.;
    • Schriml, Lynn M.;
    • Stockwell, Timothy B.;
    • Stoeckert Jr, Christian J.;
    • Sullivan, Dan E.;
    • Singh, Indresh;
    • Ward, Doyle V.;
    • Yao, Alison;
    • Zheng, Jie;
    • Barrett, Tanya;
    • Birren, Bruce;
    • Brinkac, Lauren;
    • Bruno, Vincent M.;
    • Caler, Elizabet;
    • Chapman, Sinéad
    Publication type:
    Article

  • PREDICAMENTS OF THE ACADEMIC COMMUNITY BASED EDUCATOR.

    Published in:
    Canadian Journal for the Study of Adult Education, 2017, v. 29, n. 2, p. 65, doi. 10.56105/cjsae.v29i2.5376
    By:
    • Brann-Barrett, M. Tanya;
    • Timm-Bottos, Janis
    Publication type:
    Article

  • Database resources of the National Center for Biotechnology Information.

    Published in:
    Nucleic Acids Research, 2006, v. 34, n. suppl 1, p. d173, doi. 10.1093/nar/gkj158
    By:
    • Wheeler, David L.;
    • Barrett, Tanya;
    • Benson, Dennis A.;
    • Bryant, Stephen H.;
    • Canese, Kathi;
    • Chetvernin, Vyacheslav;
    • Church, Deanna M.;
    • DiCuccio, Michael;
    • Edgar, Ron;
    • Federhen, Scott;
    • Geer, Lewis Y.;
    • Helmberg, Wolfgang;
    • Kapustin, Yuri;
    • Kenton, David L.;
    • Khovayko, Oleg;
    • Lipman, David J.;
    • Madden, Thomas L.;
    • Maglott, Donna R.;
    • Ostell, James;
    • Pruitt, Kim D.
    Publication type:
    Article

  • Database resources of the National Center for Biotechnology Information.

    Published in:
    Nucleic Acids Research, 2005, v. 33, n. suppl 1, p. d39
    By:
    • Wheeler, David L.;
    • Barrett, Tanya;
    • Benson, Dennis A.;
    • Bryant, Stephen H.;
    • Canese, Kathi;
    • Church, Deanna M.;
    • DiCuccio, Michael;
    • Edgar, Ron;
    • Federhen, Scott;
    • Helmberg, Wolfgang;
    • Kenton, David L.;
    • Khovayko, Oleg;
    • Lipman, David J.;
    • Madden, Thomas L.;
    • Maglott, Donna R.;
    • Ostell, James;
    • Pontius, Joan U.;
    • Pruitt, Kim D.;
    • Schuler, Gregory D.;
    • Schriml, Lynn M.
    Publication type:
    Article

  • NCBI GEO: mining millions of expression profiles—database and tools.

    Published in:
    Nucleic Acids Research, 2005, v. 33, n. suppl 1, p. d562
    By:
    • Barrett, Tanya;
    • Suzek, Tugba O.;
    • Troup, Dennis B.;
    • Wilhite, Stephen E.;
    • Ngau, Wing-Chi;
    • Ledoux, Pierre;
    • Rudnev, Dmitry;
    • Lash, Alex E.;
    • Fujibuchi, Wataru;
    • Edgar, Ron
    Publication type:
    Article

  • Beware imposters: MA-1, a novel MALT lymphoma cell line, is misidentified and corresponds to Pfeiffer, a diffuse large B-cell lymphoma cell line.

    Published in:
    Genes, Chromosomes & Cancer, 2013, v. 52, n. 10, p. 986, doi. 10.1002/gcc.22094
    By:
    • Capes‐Davis, Amanda;
    • Alston‐Roberts, Christine;
    • Kerrigan, Liz;
    • Reid, Yvonne A.;
    • Barrett, Tanya;
    • Burnett, Edward C.;
    • Cooper, Jim R.;
    • Dirks, Wilhelm G.;
    • MacLeod, Roderick A. F.;
    • Drexler, Hans G.;
    • Freshney, R. Ian;
    • Healy, Lyn;
    • Kohara, Arihiro;
    • Korch, Christopher;
    • Masters, John R. W.;
    • Nakamura, Yukio;
    • Nims, Raymond W.;
    • Storts, Douglas R.
    Publication type:
    Article

  • NCBI GEO: archive for gene expression and epigenomics data sets: 23-year update.

    Published in:
    Nucleic Acids Research, 2024, v. 52, n. D1, p. D138, doi. 10.1093/nar/gkad965
    By:
    • Clough, Emily;
    • Barrett, Tanya;
    • Wilhite, Stephen E;
    • Ledoux, Pierre;
    • Evangelista, Carlos;
    • Kim, Irene F;
    • Tomashevsky, Maxim;
    • Marshall, Kimberly A;
    • Phillippy, Katherine H;
    • Sherman, Patti M;
    • Lee, Hyeseung;
    • Zhang, Naigong;
    • Serova, Nadezhda;
    • Wagner, Lukas;
    • Zalunin, Vadim;
    • Kochergin, Andrey;
    • Soboleva, Alexandra
    Publication type:
    Article