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An integrative genomics approach identifies KDM4 as a modulator of trained immunity.
Published in:
European Journal of Immunology, 2022, v. 52, n. 3, p. 431, doi. 10.1002/eji.202149577
By:
- Moorlag, Simone J.C.F.M.;
- Matzaraki, Vasiliki;
- van Puffelen, Jelmer H.;
- van der Heijden, Charlotte;
- Keating, Sam;
- Groh, Laszlo;
- Röring, Rutger Jan;
- Bakker, Olivier B.;
- Mourits, Vera P.;
- Koeken, Valerie A.C.M.;
- de Bree, L. Charlotte J.;
- Smeekens, Sanne P.;
- Oosting, Marije;
- Gamboa, Raúl Aguirre;
- Riksen, Niels P.;
- Xavier, Ramnik J.;
- Wijmenga, Cisca;
- Kumar, Vinod;
- van Crevel, Reinout;
- Novakovic, Boris
Publication type:
Article
Integration of metabolomics, genomics, and immune phenotypes reveals the causal roles of metabolites in disease.
Published in:
Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02413-z
By:
- Chu, Xiaojing;
- Jaeger, Martin;
- Beumer, Joep;
- Bakker, Olivier B.;
- Aguirre-Gamboa, Raul;
- Oosting, Marije;
- Smeekens, Sanne P.;
- Moorlag, Simone;
- Mourits, Vera P.;
- Koeken, Valerie A. C. M.;
- de Bree, Charlotte;
- Jansen, Trees;
- Mathews, Ian T.;
- Dao, Khoi;
- Najhawan, Mahan;
- Watrous, Jeramie D.;
- Joosten, Irma;
- Sharma, Sonia;
- Koenen, Hans J. P. M.;
- Withoff, Sebo
Publication type:
Article
Evolution of cytokine production capacity in ancient and modern European populations.
Published in:
eLife, 2021, p. 1, doi. 10.7554/eLife.64971
By:
- Domínguez-Andrés, Jorge;
- Kuijpers, Yunus;
- Bakker, Olivier B.;
- Jaeger, Martin;
- Cheng-Jian Xu;
- Van der Meer, Jos W. M.;
- Jakobsson, Mattias;
- Bertranpetit, Jaume;
- Joosten, Leo A. B.;
- Yang Li;
- Netea, Mihai G.
Publication type:
Article
Deconvolution of bulk blood eQTL effects into immune cell subpopulations.
Published in:
BMC Bioinformatics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12859-020-03576-5
By:
- Aguirre-Gamboa, Raúl;
- de Klein, Niek;
- di Tommaso, Jennifer;
- Claringbould, Annique;
- van der Wijst, Monique GP;
- de Vries, Dylan;
- Brugge, Harm;
- Oelen, Roy;
- Võsa, Urmo;
- Zorro, Maria M.;
- Chu, Xiaojin;
- Bakker, Olivier B.;
- Borek, Zuzanna;
- Ricaño-Ponce, Isis;
- Deelen, Patrick;
- Xu, Cheng-Jiang;
- Swertz, Morris;
- Jonkers, Iris;
- Withoff, Sebo;
- Joosten, Irma
Publication type:
Article
Co-expression in tissue-specific gene networks links genes in cancer-susceptibility loci to known somatic driver genes.
Published in:
BMC Medical Genomics, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s12920-024-01941-4
By:
- Urzúa-Traslaviña, Carlos G.;
- van Lieshout, Tijs;
- Boulogne, Floranne;
- Domanegg, Kevin;
- Zidan, Mahmoud;
- Bakker, Olivier B.;
- Claringbould, Annique;
- de Ridder, Jeroen;
- Zwart, Wilbert;
- Westra, Harm-Jan;
- Deelen, Patrick;
- Franke, Lude
Publication type:
Article
Potential impact of celiac disease genetic risk factors on T cell receptor signaling in gluten-specific CD4+ T cells.
Published in:
Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-86612-5
By:
- Bakker, Olivier B.;
- Ramírez-Sánchez, Aarón D.;
- Borek, Zuzanna A.;
- de Klein, Niek;
- Li, Yang;
- Modderman, Rutger;
- Kooy-Winkelaar, Yvonne;
- Johannesen, Marie K.;
- Matarese, Filomena;
- Martens, Joost H. A.;
- Kumar, Vinod;
- van Bergen, Jeroen;
- Qiao, Shuo-Wang;
- Lundin, Knut E. A.;
- Sollid, Ludvig M.;
- Koning, Frits;
- Wijmenga, Cisca;
- Withoff, Sebo;
- Jonkers, Iris H.
Publication type:
Article
Evolutionary Trajectories of Complex Traits in European Populations of Modern Humans.
Published in:
Frontiers in Genetics, 2022, v. 13, p. 1, doi. 10.3389/fgene.2022.833190
By:
- Kuijpers, Yunus;
- Domínguez-Andrés, Jorge;
- Bakker, Olivier B.;
- Gupta, Manoj Kumar;
- Grasshoff, Martin;
- Xu, Cheng-Jian;
- Joosten, Leo A.B.;
- Bertranpetit, Jaume;
- Netea, Mihai G.;
- Li, Yang
Publication type:
Article
Integrating GWAS with bulk and single-cell RNA-sequencing reveals a role for LY86 in the anti-Candida host response.
Published in:
PLoS Pathogens, 2020, v. 16, n. 4, p. 1, doi. 10.1371/journal.ppat.1008408
By:
- de Vries, Dylan H.;
- Matzaraki, Vasiliki;
- Bakker, Olivier B.;
- Brugge, Harm;
- Westra, Harm-Jan;
- Netea, Mihai G.;
- Franke, Lude;
- Kumar, Vinod;
- van der Wijst, Monique G. P.
Publication type:
Article

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