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Long live the king: chromosome-level assembly of the lion (Panthera leo) using linked-read, Hi-C, and long-read data.
Published in:
BMC Biology, 2020, v. 18, n. 1, p. 1, doi. 10.1186/s12915-019-0734-5
By:
- Armstrong, Ellie E.;
- Taylor, Ryan W.;
- Miller, Danny E.;
- Kaelin, Christopher B.;
- Barsh, Gregory S.;
- Hadly, Elizabeth A.;
- Petrov, Dmitri
Publication type:
Article
Genomic resources for Asian (Elephas maximus) and African savannah elephant (Loxodonta africana) conservation and health research.
Published in:
Journal of Heredity, 2023, v. 114, n. 5, p. 529, doi. 10.1093/jhered/esad034
By:
- Prado, Natalia A;
- Armstrong, Ellie E;
- Brown, Janine L;
- Goldenberg, Shifra Z;
- Leimgruber, Peter;
- Pearson, Virginia R;
- Maldonado, Jesús E;
- Campana, Michael G
Publication type:
Article
Comparative analyses identify genomic features potentially involved in the evolution of birds-of-paradise.
Published in:
GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz003
By:
- Prost, Stefan;
- Armstrong, Ellie E;
- Nylander, Johan;
- Thomas, Gregg W C;
- Suh, Alexander;
- Petersen, Bent;
- Dalen, Love;
- Benz, Brett W;
- Blom, Mozes P K;
- Palkopoulou, Eleftheria;
- Ericson, Per G P;
- Irestedt, Martin
Publication type:
Article
Cost-effective assembly of the African wild dog (Lycaon pictus) genome using linked reads.
Published in:
GigaScience, 2019, v. 8, n. 2, p. N.PAG, doi. 10.1093/gigascience/giy124
By:
- Armstrong, Ellie E;
- Taylor, Ryan W;
- Prost, Stefan;
- Blinston, Peter;
- van der Meer, Esther;
- Madzikanda, Hillary;
- Mufute, Olivia;
- Mandisodza-Chikerema, Roseline;
- Stuelpnagel, John;
- Sillero-Zubiri, Claudio;
- Petrov, Dmitri
Publication type:
Article
Rapid divergence of mussel populations despite incomplete barriers to dispersal.
Published in:
Molecular Ecology, 2018, v. 27, n. 7, p. 1556, doi. 10.1111/mec.14556
By:
- Maas, Diede L.;
- Prost, Stefan;
- Bi, Ke;
- Smith, Lydia L.;
- Armstrong, Ellie E.;
- Aji, Ludi P.;
- Toha, Abdul Hamid A.;
- Gillespie, Rosemary G.;
- Becking, Leontine E.
Publication type:
Article
Highly contiguous assemblies of 101 drosophilid genomes.
Published in:
eLife, 2021, p. 1, doi. 10.7554/eLife.66405
By:
- Kim, Bernard Y.;
- Wang, Jeremy R.;
- Miller, Danny E.;
- Barmina, Olga;
- Delaney, Emily;
- Thompson, Ammon;
- Comeault, Aaron A.;
- Peede, David;
- D’Agostino, Emmanuel R. R.;
- Pelaez, Julianne;
- Aguilar, Jessica M.;
- Haji, Diler;
- Matsunaga, Teruyuki;
- Armstrong, Ellie E.;
- Zych, Molly;
- Ogawa, Yoshitaka;
- Stamenković-Radak, Marina;
- Jelić, Mihailo;
- Veselinović, Marija Savić;
- Tanasković, Marija
Publication type:
Article
Recent Evolutionary History of Tigers Highlights Contrasting Roles of Genetic Drift and Selection.
Published in:
Molecular Biology & Evolution, 2021, v. 38, n. 6, p. 2366, doi. 10.1093/molbev/msab032
By:
- Armstrong, Ellie E;
- Khan, Anubhab;
- Taylor, Ryan W;
- Gouy, Alexandre;
- Greenbaum, Gili;
- Thiéry, Alexandre;
- Kang, Jonathan T;
- Redondo, Sergio A;
- Prost, Stefan;
- Barsh, Gregory;
- Kaelin, Christopher;
- Phalke, Sameer;
- Chugani, Anup;
- Gilbert, Martin;
- Miquelle, Dale;
- Zachariah, Arun;
- Borthakur, Udayan;
- Reddy, Anuradha;
- Louis, Edward;
- Ryder, Oliver A
Publication type:
Article
Horizontal Transfer of Bacterial Cytolethal Distending Toxin B Genes to Insects.
Published in:
Molecular Biology & Evolution, 2019, v. 36, n. 10, p. 2105, doi. 10.1093/molbev/msz146
By:
- Verster, Kirsten I;
- Wisecaver, Jennifer H;
- Karageorgi, Marianthi;
- Duncan, Rebecca P;
- Gloss, Andrew D;
- Armstrong, Ellie E;
- Price, Donald K;
- Menon, Aruna R;
- Ali, Zainab M;
- Whiteman, Noah K
Publication type:
Article
Chromosome-level assembly of the gray fox (Urocyon cinereoargenteus) confirms the basal loss of PRDM9 in Canidae.
Published in:
G3: Genes | Genomes | Genetics, 2024, v. 14, n. 4, p. 1, doi. 10.1093/g3journal/jkae034
By:
- Armstrong, Ellie E;
- Bissell, Ky L;
- Fatima, H Sophia;
- Heikkinen, Maya A;
- Jessup, Anika;
- Junaid, Maryam O;
- Lee, Dong H;
- Lieb, Emily C;
- Liem, Josef T;
- Martin, Estelle M;
- Moreno, Mauricio;
- Otgonbayar, Khuslen;
- Romans, Betsy W;
- Royar, Kim;
- Adler, Mary Beth;
- Needle, David B;
- Harkess, Alex;
- Kelley, Joanna L;
- Mooney, Jazlyn A;
- Mychajliw, Alexis M
Publication type:
Article
Genome report: chromosome-level draft assemblies of the snow leopard, African leopard, and tiger (Panthera uncia, Panthera pardus pardus, and Panthera tigris).
Published in:
G3: Genes | Genomes | Genetics, 2022, v. 12, n. 12, p. 1, doi. 10.1093/g3journal/jkac277
By:
- Armstrong, Ellie E.;
- Campana, Michael G.;
- Solari, Katherine A.;
- Morgan, Simon R.;
- Ryder, Oliver A.;
- Naude, Vincent N.;
- Samelius, Gustaf;
- Sharma, Koustubh;
- Hadly, Elizabeth A.;
- Petrov, Dmitri A.
Publication type:
Article
Beary Good Genome: Haplotype-Resolved, Chromosome-Level Assembly of the Brown Bear (Ursus arctos).
Published in:
Genome Biology & Evolution, 2022, v. 14, n. 9, p. 1, doi. 10.1093/gbe/evac125
By:
- Armstrong, Ellie E;
- Perry, Blair W;
- Huang, Yongqing;
- Garimella, Kiran V;
- Jansen, Heiko T;
- Robbins, Charles T;
- Tucker, Nathan R;
- Kelley, Joanna L
Publication type:
Article
Tetragnatha kauaiensis Genome Sheds Light on the Origins of Genomic Novelty in Spiders.
Published in:
Genome Biology & Evolution, 2021, v. 13, n. 12, p. 1, doi. 10.1093/gbe/evab262
By:
- Cerca, José;
- Armstrong, Ellie E;
- Vizueta, Joel;
- Fernández, Rosa;
- Dimitrov, Dimitar;
- Petersen, Bent;
- Prost, Stefan;
- Rozas, Julio;
- Petrov, Dmitri;
- Gillespie, Rosemary G
Publication type:
Article
A holobiont view of island biogeography: Unravelling patterns driving the nascent diversification of a Hawaiian spider and its microbial associates.
Published in:
Molecular Ecology, 2022, v. 31, n. 4, p. 1299, doi. 10.1111/mec.16301
By:
- Armstrong, Ellie E.;
- Perez‐Lamarque, Benoît;
- Bi, Ke;
- Chen, Cerise;
- Becking, Leontine E.;
- Lim, Jun Ying;
- Linderoth, Tyler;
- Krehenwinkel, Henrik;
- Gillespie, Rosemary G.
Publication type:
Article
Temporal Analysis of Gene Expression and Isoform Switching in Brown Bears (Ursus arctos).
Published in:
Integrative & Comparative Biology, 2022, v. 62, n. 6, p. 1802, doi. 10.1093/icb/icac093
By:
- Perry, Blair W;
- Armstrong, Ellie E;
- Robbins, Charles T;
- Jansen, Heiko T;
- Kelley, Joanna L
Publication type:
Article
Genomics and conservation: Guidance from training to analyses and applications.
Published in:
Molecular Ecology Resources, 2024, v. 24, n. 2, p. 1, doi. 10.1111/1755-0998.13893
By:
- Schiebelhut, Lauren M.;
- Guillaume, Annie S.;
- Kuhn, Arianna;
- Schweizer, Rena M.;
- Armstrong, Ellie E.;
- Beaumont, Mark A.;
- Byrne, Margaret;
- Cosart, Ted;
- Hand, Brian K.;
- Howard, Leif;
- Mussmann, Steven M.;
- Narum, Shawn R.;
- Rasteiro, Rita;
- Rivera‐Colón, Angel G.;
- Saarman, Norah;
- Sethuraman, Arun;
- Taylor, Helen R.;
- Thomas, Gregg W. C.;
- Wellenreuther, Maren;
- Luikart, Gordon
Publication type:
Article
Good from far, but far from good: The impact of a reference genome on evolutionary inference.
Published in:
Molecular Ecology Resources, 2022, v. 22, n. 1, p. 12, doi. 10.1111/1755-0998.13531
By:
- Bentley, Blair P.;
- Armstrong, Ellie E.
Publication type:
Article

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