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Genomic Profiling on an Unselected Solid Tumor Population Reveals a Highly Mutated Wnt/β-Catenin Pathway Associated with Oncogenic EGFR Mutations.
Published in:
Journal of Personalized Medicine, 2018, v. 8, n. 2, p. 13, doi. 10.3390/jpm8020013
By:
- Jiang, Jingrui;
- Protopopov, Alexei;
- Sun, Ruobai;
- Lyle, Stephen;
- Russell, Meaghan
Publication type:
Article
TRIM13 ( RFP2) downregulation decreases tumour cell growth in multiple myeloma through inhibition of NF Kappa B pathway and proteasome activity.
Published in:
British Journal of Haematology, 2013, v. 162, n. 2, p. 210, doi. 10.1111/bjh.12365
By:
- Gatt, Moshe E.;
- Takada, Kohichi;
- Mani, Mala;
- Lerner, Mikael;
- Pick, Marjorie;
- Hideshima, Teru;
- Carrasco, Daniel E.;
- Protopopov, Alexei;
- Ivanova, Elena;
- Sangfelt, Olle;
- Grandér, Dan;
- Barlogie, Bart;
- Shaughnessy, John D.;
- Anderson, Kenneth C.;
- Carrasco, Daniel R.
Publication type:
Article
Telomerase inhibition by siRNA causes senescence and apoptosis in Barrett's adenocarcinoma cells: mechanism and therapeutic potential.
Published in:
Molecular Cancer, 2005, v. 4, p. 24, doi. 10.1186/1476-4598-4-24
By:
- Shammas, Masood A.;
- Koley, Hemanta;
- Batchu, Ramesh B.;
- Bertheau, Robert C.;
- Protopopov, Alexei;
- Munshi, Nikhil C.;
- Goyal, Raj K.
Publication type:
Article
High Mutability of the Tumor Suppressor Genes RASSF1 and RBSP3 (CTDSPL) in Cancer.
Published in:
PLoS ONE, 2009, v. 4, n. 5, p. 1, doi. 10.1371/journal.pone.0005231
By:
- Kashuba, Vladimir I.;
- Pavlova, Tatiana V.;
- Grigorieva, Elvira V.;
- Kutsenko, Alexey;
- Yenamandra, Surya Pavan;
- Jingfeng Li;
- Fuli Wang;
- Protopopov, Alexei I.;
- Zabarovska, Veronika I.;
- Senchenko, Vera;
- Haraldson, Klas;
- Eshchenko, Tatiana;
- Kobliakova, Julia;
- Vorontsova, Olga;
- Kuzmin, Igor;
- Braga, Eleonora;
- Blinov, Vladimir M.;
- Kisselev, Lev L.;
- Yi-Xin Zeng;
- Ernberg, Ingemar
Publication type:
Article
Deletion mapping using quantitative real-time PCR identifies two distinct 3p21.3 regions affected in most cervical carcinomas.
Published in:
Oncogene, 2003, v. 22, n. 19, p. 2984, doi. 10.1038/sj.onc.1206429
By:
- Senchenko, Vera;
- Liu, Jian;
- Braga, Eleonora;
- Mazurenko, Natalia;
- Loginov, Witaly;
- Seryogin, Yury;
- Bazov, Igor;
- Protopopov, Alexei;
- Kisseljov, Fedor L;
- Kashuba, Vladimir;
- Lerman, Michael I;
- Klein, George;
- Zabarovsky, Eugene R
Publication type:
Article
Isolation and chromosomal localization of a new human retinoblastoma binding protein 2 homologue 1a (RBBP2H1A).
Published in:
European Journal of Human Genetics, 2000, v. 8, n. 6, p. 407, doi. 10.1038/sj.ejhg.5200474
By:
- Kashuba, Vladimir;
- Protopopov, Alexei;
- Podowski, Raf;
- Gizatullin, Rinat;
- Li, Jingfeng;
- Klein, George;
- Wahlestedt, Claes;
- Zabarovsky, Eugene
Publication type:
Article
Telomere dysfunction induces metabolic and mitochondrial compromise.
Published in:
2011
By:
- Sahin, Ergün;
- Colla, Simona;
- Liesa, Marc;
- Moslehi, Javid;
- Müller, Florian L.;
- Guo, Mira;
- Cooper, Marcus;
- Kotton, Darrell;
- Fabian, Attila J.;
- Walkey, Carl;
- Maser, Richard S.;
- Tonon, Giovanni;
- Foerster, Friedrich;
- Xiong, Robert;
- Wang, Y. Alan;
- Shukla, Sachet A.;
- Jaskelioff, Mariela;
- Martin, Eric S.;
- Heffernan, Timothy P.;
- Protopopov, Alexei
Publication type:
Correction Notice
Telomere dysfunction induces metabolic and mitochondrial compromise.
Published in:
Nature, 2011, v. 470, n. 7334, p. 359, doi. 10.1038/nature09787
By:
- Sahin, Ergün;
- Colla, Simona;
- Liesa, Marc;
- Moslehi, Javid;
- Müller, Florian L.;
- Guo, Mira;
- Cooper, Marcus;
- Kotton, Darrell;
- Fabian, Attila J.;
- Walkey, Carl;
- Maser, Richard S.;
- Tonon, Giovanni;
- Foerster, Friedrich;
- Robert Xiong;
- Y. Alan Wang;
- Shukla, Sachet A.;
- Jaskelioff, Mariela;
- Martin, Eric S.;
- Heffernan, Timothy P.;
- Protopopov, Alexei
Publication type:
Article
Telomerase reactivation reverses tissue degeneration in aged telomerase-deficient mice.
Published in:
Nature, 2011, v. 469, n. 7328, p. 102, doi. 10.1038/nature09603
By:
- Jaskelioff, Mariela;
- Muller, Florian L.;
- Paik, Ji-Hye;
- Thomas, Emily;
- Jiang, Shan;
- Adams, Andrew C.;
- Sahin, Ergun;
- Kost-Alimova, Maria;
- Protopopov, Alexei;
- Cadiñanos, Juan;
- Horner, James W.;
- Maratos-Flier, Eleftheria;
- DePinho, Ronald A.
Publication type:
Article
GOLPH3 modulates mTOR signalling and rapamycin sensitivity in cancer.
Published in:
Nature, 2009, v. 459, n. 7250, p. 1085, doi. 10.1038/nature08109
By:
- Scott, Kenneth L.;
- Kabbarah, Omar;
- Mei-Chih Liang;
- Ivanova, Elena;
- Anagnostou, Valsamo;
- Wu, Joyce;
- Dhakal, Sabin;
- Min Wu;
- Shujuan Chen;
- Feinberg, Tamar;
- Huang, Joseph;
- Saci, Abdel;
- Widlund, Hans R.;
- Fisher, David E.;
- Yonghong Xiao;
- Rimm, David L.;
- Protopopov, Alexei;
- Kwok-Kin Wong;
- Chin, Lynda
Publication type:
Article
Chromosomally unstable mouse tumours have genomic alterations similar to diverse human cancers.
Published in:
Nature, 2007, v. 447, n. 7147, p. 966, doi. 10.1038/nature05886
By:
- Maser, Richard S.;
- Choudhury, Bhudipa;
- Campbell, Peter J.;
- Bin Feng;
- Kwok-Kin Wong;
- Protopopov, Alexei;
- O’Neil, Jennifer;
- Gutierrez, Alejandro;
- Ivanova, Elena;
- Perna, Ilana;
- Lin, Eric;
- Mani, Vidya;
- Shan Jiang;
- McNamara, Kate;
- Zaghlul, Sara;
- Edkins, Sarah;
- Stevens, Claire;
- Brennan, Cameron;
- Martin, Eric S.;
- Wiedemeyer, Ruprecht
Publication type:
Article
Quantitative imaging of haematopoietic stem and progenitor cell localization and hypoxic status in the bone marrow microenvironment.
Published in:
Nature Cell Biology, 2013, v. 15, n. 8, p. 1016, doi. 10.1038/ncb2813
By:
- Nombela-Arrieta, César;
- Pivarnik, Gregory;
- Winkel, Beatrice;
- Canty, Kimberly J.;
- Harley, Brendan;
- Mahoney, John E.;
- Park, Shin-Young;
- Lu, Jiayun;
- Protopopov, Alexei;
- Silberstein, Leslie E.
Publication type:
Article
Role of telomere dysfunction in cardiac failure in Duchenne muscular dystrophy.
Published in:
Nature Cell Biology, 2013, v. 15, n. 8, p. 895, doi. 10.1038/ncb2790
By:
- Mourkioti, Foteini;
- Kustan, Jackie;
- Kraft, Peggy;
- Day, John W.;
- Zhao, Ming-Ming;
- Kost-Alimova, Maria;
- Protopopov, Alexei;
- DePinho, Ronald A.;
- Bernstein, Daniel;
- Meeker, Alan K.;
- Blau, Helen M.
Publication type:
Article
Quantitative imaging of haematopoietic stem and progenitor cell localization and hypoxic status in the bone marrow microenvironment.
Published in:
Nature Cell Biology, 2013, v. 15, n. 5, p. 533, doi. 10.1038/ncb2730
By:
- Nombela-Arrieta, César;
- Pivarnik, Gregory;
- Winkel, Beatrice;
- Canty, Kimberly J.;
- Harley, Brendan;
- Mahoney, John E.;
- Park, Shin-Young;
- Lu, Jiayun;
- Protopopov, Alexei;
- Silberstein, Leslie E.
Publication type:
Article
Restriction site tagged (RST) microarrays: a novel technique to study the species composition of complex microbial systems.
Published in:
Nucleic Acids Research, 2003, v. 31, n. 16, p. e95, doi. 10.1093/nar/gng096
By:
- Zabarovsky, Eugene R.;
- Petrenko, Lev;
- Protopopov, Alexei;
- Vorontsova, Olga;
- Kutsenko, Alexey S.;
- Zhao, Yanyan;
- Kilosanidze, Gelena;
- Zabarovska, Veronika;
- Rakhmanaliev, Elian;
- Pettersson, Bertil;
- Kashuba, Vladimir I.;
- Ljungqvist, Olle;
- Norin, Elisabeth;
- Midtvedt, Tore;
- Möllby, Roland;
- Winberg, Gösta;
- Ernberg, Ingemar
Publication type:
Article
NotI flanking sequences: a tool for gene discovery and verification of the human genome.
Published in:
Nucleic Acids Research, 2002, v. 30, n. 14, p. 3163, doi. 10.1093/nar/gkf428
By:
- Kutsenko, Alexey S.;
- Gizatullin, Rinat Z.;
- Al‐Amin, Ali N.;
- Wang, Fuli;
- Kvasha, Sergei M.;
- Podowski, Raf M.;
- Matushkin, Yuri G.;
- Gyanchandani, Anita;
- Muravenko, Olga V.;
- Levitsky, Viktor G.;
- Kolchanov, Nikolay A.;
- Protopopov, Alexei I.;
- Kashuba, Vladimir I.;
- Kisselev, Lev L.;
- Wasserman, Wyeth;
- Wahlestedt, Claes;
- Zabarovsky, Eugene R.
Publication type:
Article
A new approach to genome mapping and sequencing: slalom libraries.
Published in:
Nucleic Acids Research, 2002, v. 30, n. 2, p. e6, doi. 10.1093/nar/30.2.e6
By:
- Zabarovska, Veronika I.;
- Gizatullin, Rinat Z.;
- Al-Amin, Ali N.;
- Podowski, Raf;
- Protopopov, Alexei I.;
- Löfdahl, Sven;
- Wahlestedt, Claes;
- Winberg, Gösta;
- Kashuba, Vladimir I.;
- Ernberg, Ingemar;
- Zabarovsky, Eugene R.
Publication type:
Article
NotI clones in the analysis of the human genome.
Published in:
Nucleic Acids Research, 2000, v. 28, n. 7, p. 1635, doi. 10.1093/nar/28.7.1635
By:
- Zabarovsky, Eugene R.;
- Gizatullin, Rinat;
- Podowski, Raf M.;
- Zabarovska, Veronika V.;
- Xie, Li;
- Muravenko, Olga V.;
- Kozyrev, Sergei;
- Petrenko, Lev;
- Skobeleva, Natalia;
- Li, Jingfeng;
- Protopopov, Alexei;
- Kashuba, Vladimir;
- Ernberg, Ingemar;
- Winberg, Gösta;
- Wahlestedt, Claes
Publication type:
Article
Co-clinical assessment identifies patterns of BRAF inhibitor resistance in melanoma.
Published in:
Journal of Clinical Investigation, 2015, v. 125, n. 4, p. 1459, doi. 10.1172/JCI78954
By:
- Kwong, Lawrence N.;
- Boland, Genevieve M.;
- Frederick, Dennie T.;
- Helms, Timothy L.;
- Akid, Ahmad T.;
- Miller, John P.;
- Shan Jiang;
- Cooper, Zachary A.;
- Xingzhi Song;
- Seth, Sahil;
- Kamara, Jennifer;
- Protopopov, Alexei;
- Mills, Gordon B.;
- Flaherty, Keith T.;
- Wargo, Jennifer A.;
- Chin, Lynda
Publication type:
Article
Telomere dysfunction promotes genome instability and metastatic potential in a K-ras p53 mouse model of lung cancer.
Published in:
Carcinogenesis, 2008, v. 29, n. 4, p. 747, doi. 10.1093/carcin/bgn050
By:
- Samanthi A. Perera;
- Richard S. Maser;
- Huili Xia;
- Kate McNamara;
- Alexei Protopopov;
- Liang Chen;
- Aram F.Hezel;
- Carla F. Kim;
- Roderick T. Bronson;
- Diego H. Castrillon;
- Lynda Chin;
- Nabeel Bardeesy;
- Ronald A. DePinho;
- Kwok-Kin Wong
Publication type:
Article
Human cell lines engineered for tetracycline-regulated expression of tumor suppressor candidate genes from a frequently affected chromosomal region, 3p21.
Published in:
Journal of Gene Medicine, 2002, v. 4, n. 4, p. 397, doi. 10.1002/jgm.283
By:
- Protopopov, Alexei I.;
- Li, Jinfeng;
- Winberg, Gösta;
- Gizatullin, Rinat Z.;
- Kashuba, Vladimir I.;
- Klein, George;
- Zabarovsky, Eugene R.
Publication type:
Article
Melanoma genome sequencing reveals frequent PREX2 mutations.
Published in:
Nature, 2012, v. 485, n. 7399, p. 502, doi. 10.1038/nature11071
By:
- Berger, Michael F.;
- Hodis, Eran;
- Heffernan, Timothy P.;
- Deribe, Yonathan Lissanu;
- Lawrence, Michael S.;
- Protopopov, Alexei;
- Ivanova, Elena;
- Watson, Ian R.;
- Nickerson, Elizabeth;
- Ghosh, Papia;
- Zhang, Hailei;
- Zeid, Rhamy;
- Ren, Xiaojia;
- Cibulskis, Kristian;
- Sivachenko, Andrey Y.;
- Wagle, Nikhil;
- Sucker, Antje;
- Sougnez, Carrie;
- Onofrio, Robert;
- Ambrogio, Lauren
Publication type:
Article
DNA breaks and chromosome pulverization from errors in mitosis.
Published in:
Nature, 2012, v. 482, n. 7383, p. 53, doi. 10.1038/nature10802
By:
- Crasta, Karen;
- Ganem, Neil J.;
- Dagher, Regina;
- Lantermann, Alexandra B.;
- Ivanova, Elena V.;
- Pan, Yunfeng;
- Nezi, Luigi;
- Protopopov, Alexei;
- Chowdhury, Dipanjan;
- Pellman, David
Publication type:
Article
Global impact of somatic structural variation on the DNA methylome of human cancers.
Published in:
Genome Biology, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s13059-019-1818-9
By:
- Zhang, Yiqun;
- Yang, Lixing;
- Kucherlapati, Melanie;
- Hadjipanayis, Angela;
- Pantazi, Angeliki;
- Bristow, Christopher A.;
- Lee, Eunjung Alice;
- Mahadeshwar, Harshad S.;
- Tang, Jiabin;
- Zhang, Jianhua;
- Seth, Sahil;
- Lee, Semin;
- Ren, Xiaojia;
- Song, Xingzhi;
- Sun, Huandong;
- Seidman, Jonathan;
- Luquette, Lovelace J.;
- Xi, Ruibin;
- Chin, Lynda;
- Protopopov, Alexei
Publication type:
Article
hUNC-93B1, a novel gene mainly expressed in the heart, is related to left ventricular diastolic function, heart failure morbidity and mortality in elderly men
Published in:
European Journal of Heart Failure, 2005, v. 7, n. 6, p. 958, doi. 10.1016/j.ejheart.2004.06.009
By:
- Ärnlöv, Johan;
- Sundström, Johan;
- Lind, Lars;
- Andrén, Bertil;
- Andersson, Maria;
- Reneland, Richard;
- Berglund, Lars;
- Kashuba, Vladimir;
- Protopopov, Alexei;
- Zabarovsky, Eugene;
- Lithell, Hans
Publication type:
Article
Cloning and Initial Functional Characterization of Mlk4α and Mlk4β.
Published in:
Genomics Insights, 2011, n. 4, p. 1, doi. 10.4137/GEI.S6092
By:
- Kashuba, Vladimir I.;
- Grigorieva, Elvira V.;
- Kvasha, Sergei M.;
- Pavlova, Tatiana V.;
- Grigoriev, Vladimir;
- Protopopov, Alexei;
- Kharchenko, Olga;
- Gizatullin, Rinat;
- Rynditch, Alla V.;
- Zabarovsky, Eugene R.
Publication type:
Article

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