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Bridging the gap in African biodiversity genomics and bioinformatics.
Published in:
Nature Biotechnology, 2023, v. 41, n. 9, p. 1348, doi. 10.1038/s41587-023-01933-2
By:
- Sharaf, Abdoallah;
- Ndiribe, Charlotte C.;
- Omotoriogun, Taiwo Crossby;
- Abueg, Linelle;
- Badaoui, Bouabid;
- Badiane Markey, Fatu J.;
- Beedessee, Girish;
- Diouf, Diaga;
- Duru, Vincent C.;
- Ebuzome, Chukwuike;
- Eziuzor, Samuel C.;
- Jaufeerally Fakim, Yasmina;
- Formenti, Giulio;
- Ghanmi, Nidhal;
- Guerfali, Fatma Zahra;
- Houaga, Isidore;
- Ideozu, Justin Eze;
- Katee, Sally Mueni;
- Khayi, Slimane;
- Kuja, Josiah O.
Publication type:
Article
Gfastats: conversion, evaluation and manipulation of genome sequences using assembly graphs.
Published in:
Bioinformatics, 2022, v. 38, n. 17, p. 4214, doi. 10.1093/bioinformatics/btac460
By:
- Formenti, Giulio;
- Abueg, Linelle;
- Brajuka, Angelo;
- Brajuka, Nadolina;
- Gallardo-Alba, Cristóbal;
- Giani, Alice;
- Fedrigo, Olivier;
- Jarvis, Erich D
Publication type:
Article
A reference genome for the Andean cavefish Trichomycterus rosablanca (Siluriformes, Trichomycteridae): Building genomic resources to study evolution in cave environments.
Published in:
Journal of Heredity, 2024, v. 115, n. 3, p. 311, doi. 10.1093/jhered/esae019
By:
- Cadena, Carlos Daniel;
- Pabón, Laura;
- DoNascimiento, Carlos;
- Abueg, Linelle;
- Tilley, Tatiana;
- O-Toole, Brian;
- Absolon, Dominic;
- Sims, Ying;
- Formenti, Giulio;
- Fedrigo, Olivier;
- Jarvis, Erich D;
- Torres, Mauricio
Publication type:
Article
A chromosome-level genome assembly for the dugong (Dugong dugon).
Published in:
Journal of Heredity, 2024, v. 115, n. 2, p. 212, doi. 10.1093/jhered/esae003
By:
- Baker, Dorothy Nevé;
- Abueg, Linelle;
- Escalona, Merly;
- Farquharson, Katherine A;
- Lanyon, Janet M;
- Duc, Diana Le;
- Schöneberg, Torsten;
- Absolon, Dominic;
- Sims, Ying;
- Fedrigo, Olivier;
- Jarvis, Erich D;
- Belov, Katherine;
- Hogg, Carolyn J;
- Shapiro, Beth
Publication type:
Article
Chromosome level genome assembly of the Etruscan shrew Suncus etruscus.
Published in:
Scientific Data, 2024, v. 11, n. 1, p. 1, doi. 10.1038/s41597-024-03011-x
By:
- Bukhman, Yury V.;
- Meyer, Susanne;
- Chu, Li-Fang;
- Abueg, Linelle;
- Antosiewicz-Bourget, Jessica;
- Balacco, Jennifer;
- Brecht, Michael;
- Dinatale, Erica;
- Fedrigo, Olivier;
- Formenti, Giulio;
- Fungtammasan, Arkarachai;
- Giri, Swagarika Jaharlal;
- Hiller, Michael;
- Howe, Kerstin;
- Kihara, Daisuke;
- Mamott, Daniel;
- Mountcastle, Jacquelyn;
- Pelan, Sarah;
- Rabbani, Keon;
- Sims, Ying
Publication type:
Article
A chromosome-level genome assembly for the Rock Ptarmigan (Lagopus muta).
Published in:
G3: Genes | Genomes | Genetics, 2023, v. 13, n. 7, p. 1, doi. 10.1093/g3journal/jkad099
By:
- Squires, Theodore E.;
- Rödin-Mörch, Patrik;
- Formenti, Giulio;
- Tracey, Alan;
- Abueg, Linelle;
- Brajuka, Nadolina;
- Jarvis, Erich;
- Halapi, Eva C.;
- Melsted, Páll;
- Höglund, Jacob;
- Magnússon, Kristinn Pétur
Publication type:
Article
Scalable, accessible and reproducible reference genome assembly and evaluation in Galaxy.
Published in:
2024
By:
- Larivière, Delphine;
- Abueg, Linelle;
- Brajuka, Nadolina;
- Gallardo-Alba, Cristóbal;
- Grüning, Bjorn;
- Ko, Byung June;
- Ostrovsky, Alex;
- Palmada-Flores, Marc;
- Pickett, Brandon D.;
- Rabbani, Keon;
- Antunes, Agostinho;
- Balacco, Jennifer R.;
- Chaisson, Mark J. P.;
- Cheng, Haoyu;
- Collins, Joanna;
- Couture, Melanie;
- Denisova, Alexandra;
- Fedrigo, Olivier;
- Gallo, Guido Roberto;
- Giani, Alice Maria
Publication type:
Letter
Prioritizing Endangered Species in Genome Sequencing: Conservation Genomics in Action with the First Platinum-Standard Reference-Quality Genome of the Critically Endangered European Mink Mustela lutreola L., 1761.
Published in:
International Journal of Molecular Sciences, 2023, v. 24, n. 19, p. 14816, doi. 10.3390/ijms241914816
By:
- Skorupski, Jakub;
- Brandes, Florian;
- Seebass, Christian;
- Festl, Wolfgang;
- Śmietana, Przemysław;
- Balacco, Jennifer;
- Jain, Nivesh;
- Tilley, Tatiana;
- Abueg, Linelle;
- Wood, Jonathan;
- Sims, Ying;
- Formenti, Giulio;
- Fedrigo, Olivier;
- Jarvis, Erich D.
Publication type:
Article
Exome sequencing of deer mice on two California Channel Islands identifies potential adaptation to strongly contrasting ecological conditions.
Published in:
Ecology & Evolution (20457758), 2021, v. 11, n. 23, p. 17191, doi. 10.1002/ece3.8357
By:
- Orrock, John L.;
- Abueg, Linelle;
- Gammie, Stephen;
- Munshi‐South, Jason
Publication type:
Article

Found: 9