Fast and accurate microRNA search using CNN.
- Published in:
- BMC Bioinformatics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12859-019-3279-2
- By:
- Publication type:
- Article
Works matching AU Tang, Xubo
Results: 15
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SegVir: Reconstruction of Complete Segmented RNA Viral Genomes from Metatranscriptomes.
- Published in:
- Molecular Biology & Evolution, 2024, v. 41, n. 8, p. 1, doi. 10.1093/molbev/msae171
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- Publication type:
- Article
3
Accurate and efficient protein embedding using multi-teacher distillation learning.
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- Bioinformatics, 2024, v. 40, n. 9, p. 1, doi. 10.1093/bioinformatics/btae567
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- Publication type:
- Article
4
PhaVIP: Phage VIrion Protein classification based on chaos game representation and Vision Transformer.
- Published in:
- Bioinformatics, 2023, v. 39, p. i30, doi. 10.1093/bioinformatics/btad229
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- Publication type:
- Article
5
HOTSPOT: hierarchical host prediction for assembled plasmid contigs with transformer.
- Published in:
- Bioinformatics, 2023, v. 39, n. 5, p. 1, doi. 10.1093/bioinformatics/btad283
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- Publication type:
- Article
6
VirBot: an RNA viral contig detector for metagenomic data.
- Published in:
- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad093
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- Publication type:
- Article
7
PhaBOX: a web server for identifying and characterizing phage contigs in metagenomic data.
- Published in:
- Bioinformatics Advances, 2023, v. 3, n. 1, p. 1, doi. 10.1093/bioadv/vbad101
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- Publication type:
- Article
8
PlasGO: enhancing GO-based function prediction for plasmid-encoded proteins based on genetic structure.
- Published in:
- GigaScience, 2024, v. 13, n. 1, p. 1, doi. 10.1093/gigascience/giae104
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- Publication type:
- Article
9
Critical Assessment of Whole Genome and Viral Enrichment Shotgun Metagenome on the Characterization of Stool Total Virome in Hepatocellular Carcinoma Patients.
- Published in:
- Viruses (1999-4915), 2023, v. 15, n. 1, p. 53, doi. 10.3390/v15010053
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- Publication type:
- Article
10
PLASMe: a tool to identify PLASMid contigs from short-read assemblies using transformer.
- Published in:
- Nucleic Acids Research, 2023, v. 51, n. 15, p. e83, doi. 10.1093/nar/gkad578
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- Publication type:
- Article
11
GOPhage: protein function annotation for bacteriophages by integrating the genomic context.
- Published in:
- Briefings in Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1093/bib/bbaf014
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- Publication type:
- Article
12
PhaGenus: genus-level classification of bacteriophages using a Transformer model.
- Published in:
- Briefings in Bioinformatics, 2023, v. 24, n. 6, p. 1, doi. 10.1093/bib/bbad408
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- Publication type:
- Article
13
PhaTYP: predicting the lifestyle for bacteriophages using BERT.
- Published in:
- Briefings in Bioinformatics, 2023, v. 24, n. 1, p. 1, doi. 10.1093/bib/bbac487
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- Publication type:
- Article
14
Accurate identification of bacteriophages from metagenomic data using Transformer.
- Published in:
- Briefings in Bioinformatics, 2022, v. 23, n. 4, p. 1, doi. 10.1093/bib/bbac258
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- Publication type:
- Article
15
RdRp-based sensitive taxonomic classification of RNA viruses for metagenomic data.
- Published in:
- Briefings in Bioinformatics, 2022, v. 23, n. 2, p. 1, doi. 10.1093/bib/bbac011
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- Publication type:
- Article