Found: 12

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  • Targeted proteomic dissection of Toxoplasma cytoskeleton sub-compartments using MORN1.

    Published in:
    Cytoskeleton, 2012, v. 69, n. 12, p. 1069, doi. 10.1002/cm.21077
    By:
    • Lorestani, Alexander;
    • Ivey, F. Douglas;
    • Thirugnanam, Sivasakthivel;
    • Busby, Michele A.;
    • Marth, Gabor T.;
    • Cheeseman, Iain M.;
    • Gubbels, Marc-Jan
    Publication type:
    Article

  • Deep learning using tumor HLA peptide mass spectrometry datasets improves neoantigen identification.

    Published in:
    Nature Biotechnology, 2019, v. 37, n. 1, p. 55, doi. 10.1038/nbt.4313
    By:
    • Bulik-Sullivan, Brendan;
    • Busby, Jennifer;
    • Palmer, Christine D;
    • Davis, Matthew J;
    • Murphy, Tyler;
    • Clark, Andrew;
    • Busby, Michele;
    • Duke, Fujiko;
    • Yang, Aaron;
    • Young, Lauren;
    • Ojo, Noelle C;
    • Caldwell, Kamilah;
    • Abhyankar, Jesse;
    • Boucher, Thomas;
    • Hart, Meghan G;
    • Makarov, Vladimir;
    • De Montpreville, Vincent Thomas;
    • Mercier, Olaf;
    • Chan, Timothy A;
    • Scagliotti, Giorgio
    Publication type:
    Article

  • Functional optimization of gene clusters by combinatorial design and assembly.

    Published in:
    Nature Biotechnology, 2014, v. 32, n. 12, p. 1241, doi. 10.1038/nbt.3063
    By:
    • Smanski, Michael J;
    • Zhao, Dehua;
    • Park, YongJin;
    • Calderon, Johnathan;
    • Bhatia, Swapnil;
    • Densmore, Douglas;
    • B A Woodruff, Lauren;
    • Gordon, D Benjamin;
    • Voigt, Christopher A;
    • Giannoukos, Georgia;
    • Ciulla, Dawn;
    • Busby, Michele;
    • Nicol, Robert
    Publication type:
    Article

  • Simultaneous generation of many RNA-seq libraries in a single reaction.

    Published in:
    Nature Methods, 2015, v. 12, n. 4, p. 323, doi. 10.1038/nmeth.3313
    By:
    • Shishkin, Alexander A;
    • Giannoukos, Georgia;
    • Kucukural, Alper;
    • Ciulla, Dawn;
    • Busby, Michele;
    • Surka, Christine;
    • Chen, Jenny;
    • Bhattacharyya, Roby P;
    • Rudy, Robert F;
    • Patel, Milesh M;
    • Novod, Nathaniel;
    • Hung, Deborah T;
    • Gnirke, Andreas;
    • Garber, Manuel;
    • Guttman, Mitchell;
    • Livny, Jonathan
    Publication type:
    Article

  • Corrigendum: Comparative analysis of RNA sequencing methods for degraded or low-input samples.

    Published in:
    Nature Methods, 2014, v. 11, n. 2, p. 210, doi. 10.1038/nmeth0214-210e
    By:
    • Adiconis, Xian;
    • Borges-Rivera, Diego;
    • Satija, Rahul;
    • DeLuca, David S;
    • Busby, Michele A;
    • Berlin, Aaron M;
    • Sivachenko, Andrey;
    • Thompson, Dawn Anne;
    • Wysoker, Alec;
    • Fennell, Timothy;
    • Gnirke, Andreas;
    • Pochet, Nathalie;
    • Regev, Aviv;
    • Levin, Joshua Z
    Publication type:
    Article

  • Comparative analysis of RNA sequencing methods for degraded or low-input samples.

    Published in:
    Nature Methods, 2013, v. 10, n. 7, p. 623, doi. 10.1038/nmeth.2483
    By:
    • Adiconis, Xian;
    • Borges-Rivera, Diego;
    • Satija, Rahul;
    • DeLuca, David S;
    • Busby, Michele A;
    • Berlin, Aaron M;
    • Sivachenko, Andrey;
    • Thompson, Dawn Anne;
    • Wysoker, Alec;
    • Fennell, Timothy;
    • Gnirke, Andreas;
    • Pochet, Nathalie;
    • Regev, Aviv;
    • Levin, Joshua Z
    Publication type:
    Article

  • Systematic comparison of monoclonal versus polyclonal antibodies for mapping histone modifications by ChIP-seq.

    Published in:
    Epigenetics & Chromatin, 2016, v. 9, p. 1, doi. 10.1186/s13072-016-0100-6
    By:
    • Busby, Michele;
    • Xue, Catherine;
    • Li, Catherine;
    • Farjoun, Yossi;
    • Gienger, Elizabeth;
    • Yofe, Ido;
    • Gladden, Adrianne;
    • Epstein, Charles B.;
    • Cornett, Evan M.;
    • Rothbart, Scott B.;
    • Nusbaum, Chad;
    • Goren, Alon
    Publication type:
    Article

  • Enhanced methods for unbiased deep sequencing of Lassa and Ebola RNA viruses from clinical and biological samples.

    Published in:
    Genome Biology, 2014, v. 15, n. 10, p. 519, doi. 10.1186/s13059-014-0519-7
    By:
    • Matranga, Christian B.;
    • Andersen, Kristian G.;
    • Winnicki, Sarah;
    • Busby, Michele;
    • Gladden, Adrianne D.;
    • Tewhey, Ryan;
    • Stremlau, Matthew;
    • Berlin, Aaron;
    • Gire, Stephen K.;
    • England, Eleina;
    • Moses, Lina M.;
    • Mikkelsen, Tarjei S.;
    • Odia, Ikponmwonsa;
    • Ehiane, Philomena E.;
    • Folarin, Onikepe;
    • Goba, Augustine;
    • Grant, Donald S.;
    • Honko, Anna;
    • Hensley, Lisa;
    • Happi, Christian
    Publication type:
    Article

  • Evidence of Ebola Virus Replication and High Concentration in Semen of a Patient During Recovery.

    Published in:
    Clinical Infectious Diseases, 2017, v. 65, n. 8, p. 1400, doi. 10.1093/cid/cix518
    By:
    • Barnes, Kayla G.;
    • Kindrachuk, Jason;
    • Lin, Aaron E.;
    • Wohl, Shirlee;
    • Qu, James;
    • Tostenson, Samantha D.;
    • Dorman, William R.;
    • Busby, Michele;
    • Siddle, Katherine J.;
    • Luo, Cynthia Y.;
    • Matranga, Christian B.;
    • Davey, Richard T.;
    • Sabeti, Pardis C.;
    • Chertow, Daniel S.
    Publication type:
    Article

  • Spatial Sequencing: A Perspective.

    Published in:
    Journal of Biomolecular Techniques, 2020, v. 31, n. 2, p. 44, doi. 10.7171/jbt.20-3102-003
    By:
    • Turczyk, Brian M.;
    • Busby, Michele;
    • Martin, Allison L.;
    • Daugharthy, Evan R.;
    • Myung, Daniel;
    • Terry, Richard C.;
    • Inverso, Samuel A.;
    • Kohman, Richie E.;
    • Church, George M.
    Publication type:
    Article

  • A Comprehensive Map of Mobile Element Insertion Polymorphisms in Humans.

    Published in:
    PLoS Genetics, 2011, v. 7, n. 8, p. 1, doi. 10.1371/journal.pgen.1002236
    By:
    • Stewart, Chip;
    • Kural, Deniz;
    • Strömberg, Michael P.;
    • Walker, Jerilyn A.;
    • Konkel, Miriam K.;
    • Stütz, Adrian M.;
    • Urban, Alexander E.;
    • Grubert, Fabian;
    • Lam, Hugo Y. K.;
    • Lee, Wan-Ping;
    • Busby, Michele;
    • Indap, Amit R.;
    • Garrison, Erik;
    • Huff, Chad;
    • Xing, Jinchuan;
    • Snyder, Michael P.;
    • Jorde, Lynn B.;
    • Batzer, Mark A.;
    • Korbel, Jan O.;
    • Marth, Gabor T.
    Publication type:
    Article

  • Scotty: a web tool for designing RNA-Seq experiments to measure differential gene expression.

    Published in:
    Bioinformatics, 2013, v. 29, n. 5, p. 656, doi. 10.1093/bioinformatics/btt015
    By:
    • Busby, Michele A.;
    • Stewart, Chip;
    • Miller, Chase A.;
    • Grzeda, Krzysztof R.;
    • Marth, Gabor T.
    Publication type:
    Article