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The Role of Geography, Diet, and Host Phylogeny on the Gut Microbiome in the Hawaiian Honeycreeper Radiation.
Published in:
Ecology & Evolution (20457758), 2024, v. 14, n. 10, p. 1, doi. 10.1002/ece3.70372
By:
- Costantini, Maria S.;
- Videvall, Elin;
- Foster, Jeffrey T.;
- Medeiros, Matthew C. I.;
- Gillece, John D.;
- Paxton, Eben H.;
- Crampton, Lisa H.;
- Mounce, Hanna L.;
- Wang, Alex X.;
- Fleischer, Robert C.;
- Campana, Michael G.;
- Reed, Floyd A.
Publication type:
Article
Francisella tularensis subsp. tularensis group A.I, United States.
Published in:
2014
By:
- Birdsell, Dawn N;
- Johansson, Anders;
- Ohrman, Caroline;
- Kaufman, Emily;
- Molins, Claudia;
- Pearson, Talima;
- Gyuranecz, Miklós;
- Naumann, Amber;
- Vogler, Amy J;
- Myrtennäs, Kerstin;
- Larsson, Pär;
- Forsman, Mats;
- Sjödin, Andreas;
- Gillece, John D;
- Schupp, James;
- Petersen, Jeannine M;
- Keim, Paul;
- Wagner, David M;
- Öhrman, Caroline
Publication type:
journal article
Francisella tularensis subsp. tularensis Group A.I, United States.
Published in:
Emerging Infectious Diseases, 2014, v. 20, n. 5, p. 861, doi. 10.3201/eid2005.131559
By:
- Birdsell, Dawn N.;
- Johansson, Anders;
- Öhrman, Caroline;
- Kaufman, Emily;
- Molins, Claudia;
- Pearson, Talima;
- Gyuranecz, Miklós;
- Naumann, Amber;
- Vogler, Amy J.;
- Myrtennäs, Kerstin;
- Larsson, Pär;
- Forsman, Mats;
- Sjödin, Andreas;
- Gillece, John D.;
- Schupp, James;
- Petersen, Jeannine M.;
- Keim, Paul;
- Wagner, David M.
Publication type:
Article
Phylogeographic, genomic, and meropenem susceptibility analysis of Burkholderia ubonensis.
Published in:
PLoS Neglected Tropical Diseases, 2017, v. 11, n. 9, p. 1, doi. 10.1371/journal.pntd.0005928
By:
- Price, Erin P.;
- Sarovich, Derek S.;
- Webb, Jessica R.;
- Hall, Carina M.;
- Jaramillo, Sierra A.;
- Sahl, Jason W.;
- Kaestli, Mirjam;
- Mayo, Mark;
- Harrington, Glenda;
- Baker, Anthony L.;
- Sidak-Loftis, Lindsay C.;
- Settles, Erik W.;
- Lummis, Madeline;
- Schupp, James M.;
- Gillece, John D.;
- Tuanyok, Apichai;
- Warner, Jeffrey;
- Busch, Joseph D.;
- Keim, Paul;
- Currie, Bart J.
Publication type:
Article
Using Whole Genome Analysis to Examine Recombination across Diverse Sequence Types of Staphylococcus aureus.
Published in:
PLoS ONE, 2015, v. 10, n. 7, p. 1, doi. 10.1371/journal.pone.0130955
By:
- Driebe, Elizabeth M.;
- Sahl, Jason W.;
- Roe, Chandler;
- Bowers, Jolene R.;
- Schupp, James M.;
- Gillece, John D.;
- Kelley, Erin;
- Price, Lance B.;
- Pearson, Talima R.;
- Hepp, Crystal M.;
- Brzoska, Pius M.;
- Cummings, Craig A.;
- Furtado, Manohar R.;
- Andersen, Paal S.;
- Stegger, Marc;
- Engelthaler, David M.;
- Keim, Paul S.
Publication type:
Article
Evolution of a Pathogen: A Comparative Genomics Analysis Identifies a Genetic Pathway to Pathogenesis in Acinetobacter.
Published in:
PLoS ONE, 2013, v. 8, n. 1, p. 1, doi. 10.1371/journal.pone.0054287
By:
- Sahl, Jason W.;
- Gillece, John D.;
- Schupp, James M.;
- Waddell, Victor G.;
- Driebe, Elizabeth M.;
- Engelthaler, David M.;
- Keim, Paul
Publication type:
Article
Whole Genome Sequence Analysis of Cryptococcus gattii from the Pacific Northwest Reveals Unexpected Diversity.
Published in:
PLoS ONE, 2011, v. 6, n. 12, p. 1, doi. 10.1371/journal.pone.0028550
By:
- Gillece, John D.;
- Schupp, James M.;
- Balajee, S. Arunmozhi;
- Harris, Julie;
- Pearson, Talima;
- Yan, Yongpan;
- Keim, Paul;
- DeBess, Emilio;
- Marsden-Haug, Nicola;
- Wohrle, Ron;
- Engelthaler, David M.;
- Lockhart, Shawn R.
Publication type:
Article
Randomized trial assessing impact of probiotic supplementation on gut microbiome and clinical outcome from targeted therapy in metastatic renal cell carcinoma.
Published in:
Cancer Medicine, 2021, v. 10, n. 1, p. 79, doi. 10.1002/cam4.3569
By:
- Dizman, Nazli;
- Hsu, JoAnn;
- Bergerot, Paulo G.;
- Gillece, John D.;
- Folkerts, Megan;
- Reining, Lauren;
- Trent, Jeffrey;
- Highlander, Sarah K.;
- Pal, Sumanta K.
Publication type:
Article
Analysis of Gut Microbiome Using Explainable Machine Learning Predicts Risk of Diarrhea Associated With Tyrosine Kinase Inhibitor Neratinib: A Pilot Study.
Published in:
Frontiers in Oncology, 2021, v. 11, p. N.PAG, doi. 10.3389/fonc.2021.604584
By:
- Wong, Chi Wah;
- Yost, Susan E.;
- Lee, Jin Sun;
- Gillece, John D.;
- Folkerts, Megan;
- Reining, Lauren;
- Highlander, Sarah K.;
- Eftekhari, Zahra;
- Mortimer, Joanne;
- Yuan, Yuan
Publication type:
Article
Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage.
Published in:
Nature Communications, 2014, v. 5, n. 11, p. 5603, doi. 10.1038/ncomms6603
By:
- Muller, Emilie E. L.;
- Pinel, Nicolás;
- Laczny, Cédric C.;
- Hoopmann, Michael R.;
- Narayanasamy, Shaman;
- Lebrun, Laura A.;
- Roume, Hugo;
- Lin, Jake;
- May, Patrick;
- Hicks, Nathan D.;
- Heintz-Buschart, Anna;
- Wampach, Linda;
- Liu, Cindy M.;
- Price, Lance B.;
- Gillece, John D.;
- Guignard, Cédric;
- Schupp, James M.;
- Vlassis, Nikos;
- Baliga, Nitin S.;
- Moritz, Robert L.
Publication type:
Article
More than 50% of Clostridium difficile Isolates from Pet Dogs in Flagstaff, USA, Carry Toxigenic Genotypes.
Published in:
PLoS ONE, 2016, v. 11, n. 10, p. 1, doi. 10.1371/journal.pone.0164504
By:
- Stone, Nathan E.;
- Sidak-Loftis, Lindsay C.;
- Sahl, Jason W.;
- Vazquez, Adam J.;
- Wiggins, Kristin B.;
- Gillece, John D.;
- Hicks, Nathan D.;
- Schupp, James M.;
- Busch, Joseph D.;
- Keim, Paul;
- Wagner, David M.
Publication type:
Article
Multi-faceted metagenomic analysis of spacecraft associated surfaces reveal planetary protection relevant microbial composition.
Published in:
PLoS ONE, 2023, v. 17, n. 3, p. 1, doi. 10.1371/journal.pone.0282428
By:
- Highlander, Sarah K.;
- Wood, Jason M.;
- Gillece, John D.;
- Folkerts, Megan;
- Fofanov, Viacheslav;
- Furstenau, Tara;
- Singh, Nitin K.;
- Guan, Lisa;
- Seuylemezian, Arman;
- Benardini, James N.;
- Engelthaler, David M.;
- Venkateswaran, Kasthuri;
- Keim, Paul S.
Publication type:
Article
A Phase II Clinical Trial of Pembrolizumab and Enobosarm in Patients with Androgen Receptor‐Positive Metastatic Triple‐Negative Breast Cancer.
Published in:
Oncologist, 2021, v. 26, n. 2, p. 99, doi. 10.1002/onco.13583
By:
- Yuan, Yuan;
- Lee, Jin Sun;
- Yost, Susan E.;
- Frankel, Paul H.;
- Ruel, Christopher;
- Egelston, Colt A.;
- Guo, Weihua;
- Gillece, John D.;
- Folkerts, Megan;
- Reining, Lauren;
- Highlander, Sarah K.;
- Robinson, Kim;
- Padam, Simran;
- Martinez, Norma;
- Tang, Aileen;
- Schmolze, Daniel;
- Waisman, James;
- Sedrak, Mina;
- Lee, Peter P.;
- Mortimer, Joanne
Publication type:
Article
First draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ.
Published in:
Standards in Genomic Sciences, 2017, v. 12, p. 1, doi. 10.1186/s40793-017-0274-y
By:
- Muller, Emilie E. L.;
- Narayanasamy, Shaman;
- Zeimes, Myriam;
- Laczny, Cédric C.;
- Lebrun, Laura A.;
- Herold, Malte;
- Hicks, Nathan D.;
- Gillece, John D.;
- Schupp, James M.;
- Keim, Paul;
- Wilmes, Paul
Publication type:
Article
Mapping and comparing bacterial microbiota in the sinonasal cavity of healthy, allergic rhinitis, and chronic rhinosinusitis subjects.
Published in:
International Forum of Allergy & Rhinology, 2017, v. 7, n. 6, p. 561, doi. 10.1002/alr.21934
By:
- Lal, Devyani;
- Keim, Paul;
- Delisle, Josie;
- Barker, Bridget;
- Rank, Matthew A.;
- Chia, Nicholas;
- Schupp, James M.;
- Gillece, John D.;
- Cope, Emily K.
Publication type:
Article
Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance.
Published in:
Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-19006-2
By:
- Herold, Malte;
- Martínez Arbas, Susana;
- Narayanasamy, Shaman;
- Sheik, Abdul R.;
- Kleine-Borgmann, Luise A. K.;
- Lebrun, Laura A.;
- Kunath, Benoît J.;
- Roume, Hugo;
- Bessarab, Irina;
- Williams, Rohan B. H.;
- Gillece, John D.;
- Schupp, James M.;
- Keim, Paul S.;
- Jäger, Christian;
- Hoopmann, Michael R.;
- Moritz, Robert L.;
- Ye, Yuzhen;
- Li, Sujun;
- Tang, Haixu;
- Heintz-Buschart, Anna
Publication type:
Article
Real-time PCR assays for genotyping of Cryptococcus gattii in North America.
Published in:
BMC Microbiology, 2014, v. 14, n. 1, p. 1, doi. 10.1186/1471-2180-14-125
By:
- Kelley, Erin J.;
- Driebe, Elizabeth M.;
- Etienne, Kizee;
- Brandt, Mary E.;
- Schupp, James M.;
- Gillece, John D.;
- Trujillo, Jesse S.;
- Lockhart, Shawn R.;
- Deak, Eszter;
- Keim, Paul S.;
- Engelthaler, David M.
Publication type:
Article

Found: 17