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Layout-aware text extraction from full-text PDF of scientific articles.
Published in:
Source Code for Biology & Medicine, 2012, v. 7, n. 1, p. 7, doi. 10.1186/1751-0473-7-7
By:
- Ramakrishnan, Cartic;
- Patnia, Abhishek;
- Howy, Eduard;
- Burns, Gully APC
Publication type:
Article
Tools for knowledge acquisition within the NeuroScholar system and their application to anatomical tract-tracing data.
Published in:
Journal of Biomedical Discovery & Collaboration, 2006, v. 1, p. 10, doi. 10.1186/1747-5333-1-10
By:
- Burns, Gully A. P. C.;
- Wei-Cheng Cheng
Publication type:
Article
Toward interoperable bioscience data.
Published in:
Nature Genetics, 2012, v. 44, n. 2, p. 121, doi. 10.1038/ng.1054
By:
- Sansone, Susanna-Assunta;
- Rocca-Serra, Philippe;
- Field, Dawn;
- Maguire, Eamonn;
- Taylor, Chris;
- Hofmann, Oliver;
- Fang, Hong;
- Neumann, Steffen;
- Tong, Weida;
- Amaral-Zettler, Linda;
- Begley, Kimberly;
- Booth, Tim;
- Bougueleret, Lydie;
- Burns, Gully;
- Chapman, Brad;
- Clark, Tim;
- Coleman, Lee-Ann;
- Copeland, Jay;
- Das, Sudeshna;
- de Daruvar, Antoine
Publication type:
Article
Database of NIH grants using machine-learned categories and graphical clustering.
Published in:
Nature Methods, 2011, v. 8, n. 6, p. 443, doi. 10.1038/nmeth.1619
By:
- Talley, Edmund M;
- Newman, David;
- Mimno, David;
- Herr, Bruce W;
- Wallach, Hanna M;
- Burns, Gully A P C;
- Leenders, A G Miriam;
- McCallum, Andrew
Publication type:
Article
A 2012 Workshop: Vaccine and Drug Ontology in the Study of Mechanism and Effect (VDOSME 2012).
Published in:
Journal of Biomedical Semantics, 2012, v. 3, n. 1, p. 12, doi. 10.1186/2041-1480-3-12
By:
- Yongqun He;
- Toldo, Luca;
- Burns, Gully;
- Cui Tao;
- Abernethy, Darrell R.
Publication type:
Article
Reports on the 2013 AAAI Fall Symposium Series.
Published in:
2014
By:
- Burns, Gully A. P. C.;
- Gil, Yolanda;
- Villanueva-Rosales, Natalia;
- Yan Liu;
- Risi, Sebastian;
- Lehman, Joel;
- Clune, Jeff;
- Lebiere, Christian;
- Rosenbloom, Paul S.;
- van Harmelen, Frank;
- Hendler, James A.;
- Hitzler, Pascal;
- Janowicz, Krzysztof;
- Swarup, Samarth
Publication type:
Proceeding
An Analysis of the Abstracts Presented at the Annual Meetings of the Society for Neuroscience from 2001 to 2006.
Published in:
PLoS ONE, 2008, v. 3, n. 4, p. 1, doi. 10.1371/journal.pone.0002052
By:
- Lin, John M.;
- Bohland, Jason W.;
- Andrews, Peter;
- Burns, Gully A. P. C.;
- Allen, Cara B.;
- Mitra, Partha P.
Publication type:
Article
Standardization of assay representation in the Ontology for Biomedical Investigations.
Published in:
Database: The Journal of Biological Databases & Curation, 2021, v. 2021, p. 1, doi. 10.1093/database/baab040
By:
- Vita, Randi;
- Zheng, Jie;
- Jackson, Rebecca;
- Dooley, Damion;
- Overton, James A;
- Miller, Mark A;
- Berrios, Daniel C;
- Scheuermann, Richard H;
- He, Yongqun;
- McGinty, Hande Küçük;
- Brochhausen, Mathias;
- Lin, Aisyah Yu;
- Jain, Sagar B;
- Chibucos, Marcus C;
- Judkins, John;
- Giglio, Michelle G;
- Feng, Irene Y;
- Burns, Gully;
- Brush, Matthew H;
- Peters, Bjoern
Publication type:
Article
Building deep learning models for evidence classification from the open access biomedical literature.
Published in:
Database: The Journal of Biological Databases & Curation, 2019, v. 2019, p. N.PAG, doi. 10.1093/database/baz034
By:
- Burns, Gully A;
- Li, Xiangci;
- Peng, Nanyun
Publication type:
Article
Automated detection of discourse segment and experimental types from the text of cancer pathway results sections.
Published in:
Database: The Journal of Biological Databases & Curation, 2016, v. 2016, p. 1, doi. 10.1093/database/baw122
By:
- Burns, Gully A. P. C.;
- Dasigi, Pradeep;
- de Waard, Anita;
- Hovy, Eduard H.
Publication type:
Article
Text mining for the biocuration workflow.
Published in:
Database: The Journal of Biological Databases & Curation, 2012, v. 2012, p. 1, doi. 10.1093/database/bas020
By:
- Hirschman, Lynette;
- Burns, Gully A. P. C;
- Krallinger, Martin;
- Arighi, Cecilia;
- Cohen, K. Bretonnel;
- Valencia, Alfonso;
- Wu, Cathy H.;
- Chatr-Aryamontri, Andrew;
- Dowell, Karen G.;
- Huala, Eva;
- Lourenço, Anália;
- Nash, Robert;
- Veuthey, Anne-Lise;
- Wiegers, Thomas;
- Winter, Andrew G.
Publication type:
Article
The NeuARt II system: a viewing tool for neuroanatomical data based on published neuroanatomical atlases.
Published in:
BMC Bioinformatics, 2006, v. 7, p. 531, doi. 10.1186/1471-2105-7-531
By:
- Burns, Gully APC;
- Wei-Cheng Cheng;
- Thompson, Richard H;
- Swanson, Larry W
Publication type:
Article
Building the Ferretome.
Published in:
Frontiers in Neuroinformatics, 2016, p. 1, doi. 10.3389/fninf.2016.00016
By:
- Sukhinin, Dmitrii I.;
- Engel, Andreas K.;
- Manger, Paul;
- Hilgetag, Claus C.;
- Burns, Gully A.;
- Hidetoshi Ikeno
Publication type:
Article
Virk: an active learning-based system for bootstrapping knowledge base development in the neurosciences.
Published in:
Frontiers in Neuroinformatics, 2013, v. 7, p. 1, doi. 10.3389/fninf.2013.00038
By:
- Ambert, Kyle H.;
- Cohen, Aaron M.;
- Burns, Gully A. P. C.;
- Boudreau, Eilis;
- Sonmez, Kemal
Publication type:
Article

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