Found: 30
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An online model composition tool for system biology models.
- Published in:
- BMC Systems Biology, 2013, v. 7, n. 1, p. 1, doi. 10.1186/1752-0509-7-88
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- Article
PathCase-SB: integrating data sources and providing tools for systems biology research.
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- BMC Systems Biology, 2012, v. 6, n. 1, p. 67, doi. 10.1186/1752-0509-6-67
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- Article
Metabolomics of Small Intestine Neuroendocrine Tumors and Related Hepatic Metastases.
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- Metabolites (2218-1989), 2019, v. 9, n. 12, p. 300, doi. 10.3390/metabo9120300
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- Article
Hercules: a profile HMM-based hybrid error correction algorithm for long reads.
- Published in:
- Nucleic Acids Research, 2018, v. 46, n. 21, p. e125, doi. 10.1093/nar/gky724
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- Article
From cell lines to cancer patients: personalized drug synergy prediction.
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- Bioinformatics, 2024, v. 40, n. 5, p. 1, doi. 10.1093/bioinformatics/btae134
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- Article
PiDeeL: metabolic pathway-informed deep learning model for survival analysis and pathological classification of gliomas.
- Published in:
- Bioinformatics, 2023, v. 39, n. 11, p. 1, doi. 10.1093/bioinformatics/btad684
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- Article
unifying network modeling approach for codon optimization.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3935, doi. 10.1093/bioinformatics/btac428
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- Publication type:
- Article
Targeted metabolomics analyses for brain tumor margin assessment during surgery.
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- Bioinformatics, 2022, v. 38, n. 12, p. 3238, doi. 10.1093/bioinformatics/btac309
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- Publication type:
- Article
Uncovering complementary sets of variants for predicting quantitative phenotypes.
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- Bioinformatics, 2022, v. 38, n. 4, p. 908, doi. 10.1093/bioinformatics/btab803
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- Publication type:
- Article
AMULET: a novel read count-based method for effective multiplet detection from single nucleus ATAC-seq data.
- Published in:
- Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02469-x
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- Article
k-Shell decomposition reveals structural properties of the gene coexpression network for neurodevelopment.
- Published in:
- Turkish Journal of Biology, 2017, v. 41, n. 2, p. 333, doi. 10.3906/biy-1608-30
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- Publication type:
- Article
Detailed modeling of positive selection improves detection of cancer driver genes.
- Published in:
- Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-11284-9
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- Publication type:
- Article
Matrix Metalloproteinase-11 Promotes Early Mouse Mammary Gland Tumor Growth through Metabolic Reprogramming and Increased IGF1/AKT/FoxO1 Signaling Pathway, Enhanced ER Stress and Alteration in Mitochondrial UPR.
- Published in:
- Cancers, 2020, v. 12, n. 9, p. 2357, doi. 10.3390/cancers12092357
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- Publication type:
- Article
An online system for metabolic network analysis.
- Published in:
- Database: The Journal of Biological Databases & Curation, 2014, v. 2014, p. 1, doi. 10.1093/database/bau091
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- Publication type:
- Article
An integrated genomic and metabolomic approach for defining survival time in adult oligodendrogliomas patients.
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- Metabolomics, 2019, v. 15, n. 5, p. N.PAG, doi. 10.1007/s11306-019-1522-5
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- Publication type:
- Article
DAWN: a framework to identify autism genes and subnetworks using gene expression and genetics.
- Published in:
- Molecular Autism, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2040-2392-5-22
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- Publication type:
- Article
Metabolomic characterization of human hippocampus from drug-resistant epilepsy with mesial temporal seizure.
- Published in:
- Epilepsia (Series 4), 2018, v. 59, n. 3, p. 607, doi. 10.1111/epi.14000
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- Publication type:
- Article
ADEMA: An Algorithm to Determine Expected Metabolite Level Alterations Using Mutual Information.
- Published in:
- PLoS Computational Biology, 2013, v. 9, n. 1, p. 1, doi. 10.1371/journal.pcbi.1002859
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- Publication type:
- Article
De novo ChIP-seq analysis.
- Published in:
- Genome Biology, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s13059-015-0756-4
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- Publication type:
- Article
Machine learning assisted intraoperative assessment of brain tumor margins using HRMAS NMR spectroscopy.
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- PLoS Computational Biology, 2020, v. 16, n. 11, p. 1, doi. 10.1371/journal.pcbi.1008184
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- Publication type:
- Article
OPERATIONAL VARIABLE JOB SCHEDULING WITH ELIGIBILITY CONSTRAINTS: A RANDOMIZED CONSTRAINT-GRAPH-BASED APPROACH.
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- Technological & Economic Development of Economy, 2009, v. 15, n. 2, p. 245, doi. 10.3846/1392-8619.2009.15.245-266
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- Publication type:
- Article
De novo missense variants disrupting protein–protein interactions affect risk for autism through gene co-expression and protein networks in neuronal cell types.
- Published in:
- Molecular Autism, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13229-020-00386-7
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- Publication type:
- Article
OBSERVATION CONFLICT RESOLUTION IN STEADY-STATE METABOLIC NETWORK DYNAMICS ANALYSIS.
- Published in:
- Journal of Bioinformatics & Computational Biology, 2012, v. 10, n. 1, p. 1240004-1, doi. 10.1142/S0219720012400045
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- Publication type:
- Article
A NEW METABOLOMICS ANALYSIS TECHNIQUE:: STEADY-STATE METABOLIC NETWORK DYNAMICS ANALYSIS.
- Published in:
- Journal of Bioinformatics & Computational Biology, 2012, v. 10, n. 1, p. 1240003-1, doi. 10.1142/S0219720012400033
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- Publication type:
- Article
The effect of kinship in re-identification attacks against genomic data sharing beacons.
- Published in:
- Bioinformatics, 2020, v. 36, p. i903, doi. 10.1093/bioinformatics/btaa821
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- Article
Apollo: a sequencing-technology-independent, scalable and accurate assembly polishing algorithm.
- Published in:
- Bioinformatics, 2020, v. 36, n. 12, p. 3669, doi. 10.1093/bioinformatics/btaa179
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- Publication type:
- Article
ST-Steiner: a spatio-temporal gene discovery algorithm.
- Published in:
- Bioinformatics, 2019, v. 35, n. 18, p. 3433, doi. 10.1093/bioinformatics/btz110
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- Publication type:
- Article
Re-identification of individuals in genomic data-sharing beacons via allele inference.
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- Bioinformatics, 2019, v. 35, n. 3, p. 365, doi. 10.1093/bioinformatics/bty643
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- Publication type:
- Article
MIRA: mutual information-based reporter algorithm for metabolic networks.
- Published in:
- Bioinformatics, 2014, v. 30, n. 12, p. i175, doi. 10.1093/bioinformatics/btu290
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- Publication type:
- Article
Robust inference of kinase activity using functional networks.
- Published in:
- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-21211-6
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- Publication type:
- Article