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Opposing Immune-Metabolic Signature in Visceral Versus Subcutaneous Adipose Tissue in Patients with Adenocarcinoma of the Oesophagus and the Oesophagogastric Junction.
Published in:
Metabolites (2218-1989), 2021, v. 11, n. 11, p. 768, doi. 10.3390/metabo11110768
By:
- Heeran, Aisling B.;
- McCready, Jessica;
- Dunne, Margaret R.;
- Donlon, Noel E.;
- Nugent, Timothy S.;
- Bhardwaj, Anshul;
- Mitchelson, Kathleen A. J.;
- Buckley, Amy M.;
- Ravi, Narayanasamy;
- Roche, Helen M.;
- Reynolds, John V.;
- Lynam-Lennon, Niamh;
- O'Sullivan, Jacintha
Publication type:
Article
Metformin is a metabolic modulator and radiosensitiser in rectal cancer.
Published in:
Frontiers in Oncology, 2023, p. 1, doi. 10.3389/fonc.2023.1216911
By:
- Buckley, CroíE.;
- O'Brien, Rebecca M.;
- Nugent, Timothy S.;
- Donlon, Noel E.;
- O'Connell, Fiona;
- Reynolds, John V.;
- Hafeez, Adnan;
- O'Ríordáin, Diarmuid S.;
- Hannon, Robert A.;
- Neary, Paul;
- Kalbassi, Reza;
- Mehigan, Brian J.;
- McCormick, Paul H.;
- Dunne, Cara;
- Kelly, Michael E.;
- Larkin, John O.;
- O'Sullivan, Jacintha;
- Lynam-Lennon, Niamh
Publication type:
Article
Evaluation of predictions in the CASP10 model refinement category.
Published in:
Proteins, 2014, v. 82, p. 98, doi. 10.1002/prot.24377
By:
- Nugent, Timothy;
- Cozzetto, Domenico;
- Jones, David T.
Publication type:
Article
The Protein Secretome Is Altered in Rectal Cancer Tissue Compared to Normal Rectal Tissue, and Alterations in the Secretome Induce Enhanced Innate Immune Responses.
Published in:
Cancers, 2021, v. 13, n. 3, p. 571, doi. 10.3390/cancers13030571
By:
- Heeran, Aisling B.;
- Dunne, Margaret R.;
- Morrissey, Maria E.;
- Buckley, Croí E.;
- Clarke, Niamh;
- Cannon, Aoife;
- Donlon, Noel E.;
- Nugent, Timothy S.;
- Durand, Michael;
- Dunne, Cara;
- Larkin, John O.;
- Mehigan, Brian;
- McCormick, Paul;
- Lynam-Lennon, Niamh;
- O'Sullivan, Jacintha;
- De Miranda, Noel
Publication type:
Article
Linking Circulating Serum Proteins with Clinical Outcomes in Esophageal Adenocarcinoma—An Emerging Role for Chemokines.
Published in:
Cancers, 2020, v. 12, n. 11, p. 3356, doi. 10.3390/cancers12113356
By:
- Donlon, Noel E.;
- Sheppard, Andrew;
- Davern, Maria;
- O'Connell, Fiona;
- Phelan, James J.;
- Power, Robert;
- Nugent, Timothy;
- Dinneen, Kate;
- Aird, John;
- Greene, John;
- Nevins Selvadurai, Paul;
- Bhardwaj, Anshul;
- Foley, Emma K.;
- Ravi, Narayanasamy;
- Donohoe, Claire L.;
- Reynolds, John V.;
- Lysaght, Joanne;
- O'Sullivan, Jacintha;
- Dunne, Margaret R.
Publication type:
Article
Membrane protein orientation and refinement using a knowledge-based statistical potential.
Published in:
BMC Bioinformatics, 2013, v. 14, n. 1, p. 276, doi. 10.1186/1471-2105-14-276
By:
- Nugent, Timothy;
- Jones, David T.
Publication type:
Article
Detecting pore-lining regions in transmembrane protein sequences.
Published in:
BMC Bioinformatics, 2012, v. 13, n. 1, p. 169, doi. 10.1186/1471-2105-13-169
By:
- Nugent, Timothy;
- Jones, David T
Publication type:
Article
Application of PREVENA (Surgical Incision Protection System) in reducing surgical site infections following reversal of ileostomy or colostomy: the PRIC study protocol.
Published in:
International Journal of Colorectal Disease, 2022, v. 37, n. 5, p. 1215, doi. 10.1007/s00384-022-04153-3
By:
- Low, Ernest Z.;
- Nugent, Timothy S.;
- O'Sullivan, Niall J.;
- Kavanagh, Dara;
- Larkin, John O.;
- McCormick, Paul H.;
- Mehigan, Brian J.;
- Kelly, Michael E.
Publication type:
Article
Prostate radiotherapy and the risk of secondary rectal cancer—a meta-analysis.
Published in:
International Journal of Colorectal Disease, 2022, v. 37, n. 2, p. 437, doi. 10.1007/s00384-021-04075-6
By:
- Nugent, Timothy S.;
- Low, Ernest Z.;
- Fahy, Matthew R.;
- Donlon, Noel E.;
- McCormick, Paul H.;
- Mehigan, Brian J.;
- Cunningham, Moya;
- Gillham, Charles;
- Kavanagh, Dara O.;
- Kelly, Michael E.;
- Larkin, John O.
Publication type:
Article
Obesity and anastomotic leak rates in colorectal cancer: a meta-analysis.
Published in:
International Journal of Colorectal Disease, 2021, v. 36, n. 9, p. 1819, doi. 10.1007/s00384-021-03909-7
By:
- Nugent, Timothy S.;
- Kelly, Michael E.;
- Donlon, Noel E.;
- Fahy, Matthew R.;
- Larkin, John O.;
- McCormick, Paul H.;
- Mehigan, Brian J.
Publication type:
Article
Grid-shell design and analysis via reciprocal discrete Airy stress functions.
Published in:
International Journal of Space Structures, 2022, v. 37, n. 2, p. 150, doi. 10.1177/09560599221081004
By:
- Konstantatou, Marina;
- Baker, William;
- Nugent, Timothy;
- McRobie, Allan
Publication type:
Article
Current opinions and practices for the management of acute appendicitis: an international survey.
Published in:
Irish Journal of Medical Science, 2021, v. 190, n. 2, p. 749, doi. 10.1007/s11845-020-02349-6
By:
- Boland, Patrick Anthony;
- Donlon, Noel E.;
- Kelly, Michael E.;
- Nugent, Timothy;
- Free, Ross;
- Waters, Peadar;
- Neary, Peter;
- Rausa, Emanuele;
- Proud, David;
- Donohoe, Claire L.;
- Barry, Kevin M.;
- Reynolds, John V.
Publication type:
Article
Factors influencing surgical management of acute appendicitis in a large university hospital without a dedicated emergency theatre.
Published in:
Irish Journal of Medical Science, 2020, v. 189, n. 2, p. 649, doi. 10.1007/s11845-019-02135-z
By:
- Foley, Megan Power;
- MacLean, Michael;
- Doyle, Ciaran;
- Nugent, Timothy;
- Kelly, Michael E.;
- Narouz, Fady;
- Mehigan, Brian;
- McCormick, Paul;
- Larkin, John
Publication type:
Article
The role of intraoperative radiotherapy in advanced rectal cancer: a meta‐analysis.
Published in:
Colorectal Disease, 2021, v. 23, n. 8, p. 1998, doi. 10.1111/codi.15698
By:
- Fahy, Matthew R.;
- Kelly, Michael E.;
- Power Foley, Megan;
- Nugent, Timothy S.;
- Shields, Conor J.;
- Winter, Des C.
Publication type:
Article
Can a biobank network and supporting infrastructure enhance Ireland's ability to attract pharmaceutical research and development and clinical trial opportunities? A pilot survey.
Published in:
Journal of Biorepository Science for Applied Medicine, 2016, v. 4, p. 1, doi. 10.2147/BSAM.S103837
By:
- Mee, Blanaid;
- Gaffney, Eoin;
- McGarrigle, Sarah;
- Glynn, Sharon A.;
- Connolly, Elisabeth M.;
- McCormick, Paul H.;
- Flannery, Delia;
- O'Connor, Katrina;
- Lawson, Margaret;
- Ryan, Lisa;
- Nugent, Timothy;
- Ward, Ronan;
- Sullivan, Francis J.;
- Fay, Joanna;
- O'Grady, Tony;
- Kay, Elaine;
- Eustace, Joe;
- Burke, Louise;
- Finn, Stephen;
- Flavin, Richard
Publication type:
Article
Predicting Transmembrane Helix Packing Arrangements using Residue Contacts and a Force-Directed Algorithm.
Published in:
PLoS Computational Biology, 2010, v. 6, n. 3, p. 1, doi. 10.1371/journal.pcbi.1000714
By:
- Nugent, Timothy;
- Jones, David T.
Publication type:
Article
Life-Threatening Intraparenchymal Hemorrhage of Steroid-Induced Hepatic Adenomas in a Healthy Man.
Published in:
ACG Case Reports Journal, 2021, v. 8, n. 5, p. 1, doi. 10.14309/crj.0000000000000601
By:
- Nugent, Timothy S.;
- Donlon, Noel;
- Kelly, Michael;
- Iqbal, Masood;
- Murphy, Noelle;
- Ryan, Mark;
- Maguire, Donal
Publication type:
Article
Impact of progesterone receptor status on response to neoadjuvant chemotherapy in estrogen receptor‐positive breast cancer patients.
Published in:
Journal of Surgical Oncology, 2020, v. 122, n. 5, p. 861, doi. 10.1002/jso.26096
By:
- Boland, Michael R.;
- Ryan, Éanna J.;
- Nugent, Timothy;
- Gilroy, Darina;
- Kelly, Michael E.;
- Kennedy, John;
- Maguire, Aoife;
- Alazawi, Dhafir;
- Boyle, Terence J.;
- Connolly, Elizabeth M.
Publication type:
Article
Management of chyle leaks following esophageal resection: a systematic review.
Published in:
Diseases of the Esophagus, 2021, v. 34, n. 11, p. 1, doi. 10.1093/dote/doab012
By:
- Power, Robert;
- Smyth, Philip;
- Donlon, Noel E;
- Nugent, Timothy;
- Donohoe, Claire L;
- Reynolds, John V
Publication type:
Article
Conserved-residue mutations in Wzy affect O-antigen polymerization and Wzz-mediated chain-length regulation in Pseudomonas aeruginosa PAO1.
Published in:
Scientific Reports, 2013, p. 1, doi. 10.1038/srep03441
By:
- Islam, Salim T.;
- Huszczynski, Steven M.;
- Nugent, Timothy;
- Gold, Alexander C.;
- Lam, Joseph S.
Publication type:
Article
The Optimal Approach to Surgical Management of Goblet Cell Carcinoid of the Appendix: A Systematic Review.
Published in:
Diagnostics (2075-4418), 2024, v. 14, n. 16, p. 1773, doi. 10.3390/diagnostics14161773
By:
- Salama, Mahmoud M.;
- O'Neill, Maeve A.;
- Ryan, Éanna J.;
- O'Sullivan, Niall J.;
- Nugent, Timothy S.;
- Temperley, Hugo C.;
- Mehigan, Brian J.;
- Larkin, John O.;
- Gallagher, David;
- O'Kane, Grainne;
- McCormick, Paul H.;
- Kelly, Michael E.
Publication type:
Article
The transmembrane topology of Batten disease protein CLN3 determined by consensus computational prediction constrained by experimental data
Published in:
FEBS Letters, 2008, v. 582, n. 7, p. 1019, doi. 10.1016/j.febslet.2008.02.049
By:
- Nugent, Timothy;
- Mole, Sara E.;
- Jones, David T.
Publication type:
Article
The MEMPACK alpha-helical transmembrane protein structure prediction server.
Published in:
Bioinformatics, 2011, v. 27, n. 10, p. 1438, doi. 10.1093/bioinformatics/btr096
By:
- Nugent, Timothy;
- Ward, Sean;
- Jones, David T.
Publication type:
Article
Justice Alfred Lutwyche and the early Supreme Court.
Published in:
Queensland History Journal, 2023, v. 25, n. 7, p. 575
By:
- Nugent, Timothy
Publication type:
Article
Fibromatosis of the breast: a 10-year multi-institutional experience and review of the literature.
Published in:
Breast Cancer (13406868), 2021, v. 28, n. 1, p. 168, doi. 10.1007/s12282-020-01145-5
By:
- Boland, Michael R.;
- Nugent, Timothy;
- Nolan, Jack;
- O'Mahony, Johnny;
- O'Keeffe, Sylvia;
- Gillham, Charles C.;
- Maguire, Aoife;
- Geraghty, James;
- McCartan, Damian;
- Evoy, Denis;
- Prichard, Ruth S.;
- McDermott, Enda W.;
- Alazawi, Dhaffir;
- Boyle, Terence J.;
- Connolly, Elizabeth M.
Publication type:
Article

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