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Multi-omic profiling of simultaneous ductal carcinoma in situ and invasive breast cancer.
Published in:
Breast Cancer Research & Treatment, 2024, v. 205, n. 3, p. 451, doi. 10.1007/s10549-024-07270-5
By:
- Kaplan, Henry G.;
- Dowdell, Alexa K.;
- Berry, Anna B.;
- Shimol, Racheli Ben;
- Robinson, Fred L.;
- Carney, Christopher A.;
- Piening, Brian D.
Publication type:
Article
Novel Connections Between DNA Replication, Telomere Homeostasis, and the DNA Damage Response Revealed by a Genome-Wide Screen for TEL1/ATM Interactions in Saccharomyces cerevisiae.
Published in:
Genetics, 2013, v. 193, n. 4, p. 1117, doi. 10.1534/genetics.113.149849
By:
- Piening, Brian D.;
- Huang, Dongqing;
- Paulovich, Amanda G.
Publication type:
Article
Myeloid MyD88 restricts CD8<sup>+</sup> T cell response to radiation therapy in pancreatic cancer.
Published in:
Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-35834-w
By:
- Medler, Terry R.;
- Blair, Tiffany C.;
- Alice, Alejandro F.;
- Dowdell, Alexa K.;
- Piening, Brian D.;
- Crittenden, Marka R.;
- Gough, Michael J.
Publication type:
Article
Applying genomics in heart transplantation.
Published in:
Transplant International, 2018, v. 31, n. 3, p. 278, doi. 10.1111/tri.13119
By:
- Keating, Brendan J.;
- Pereira, Alexandre C.;
- Snyder, Michael;
- Piening, Brian D.
Publication type:
Article
Fluorescent tracking identifies key migratory dendritic cells in the lymph node after radiotherapy.
Published in:
Life Science Alliance, 2022, v. 5, n. 9, p. 1, doi. 10.26508/lsa.202101337
By:
- Blair, Tiffany C.;
- Bambina, Shelly;
- Kramer, Gwen F.;
- Dowdell, Alexa K.;
- Alice, Alejandro F.;
- Baird, Jason R.;
- Lund, Amanda W.;
- Piening, Brian D.;
- Crittenden, Marka R.;
- Gough, Michael J.
Publication type:
Article
Transcriptional and immunohistological assessment of immune infiltration in pancreatic cancer.
Published in:
PLoS ONE, 2020, v. 15, n. 8, p. 1, doi. 10.1371/journal.pone.0238380
By:
- Bernard, Brady;
- Rajamanickam, Venkatesh;
- Dubay, Christopher;
- Piening, Brian;
- Alonso, Emilio;
- Jutric, Zeljka;
- Tang, Ephraim;
- Newell, Pippa;
- Hansen, Paul;
- Medler, Terry;
- Gunderson, Andrew;
- Young, Kristina;
- Bifulco, Carlo;
- Pucliowska, Joanna;
- Crittenden, Marka R.;
- Gough, Michael J.
Publication type:
Article
Gut microbiota analyses of Saudi populations for type 2 diabetes-related phenotypes reveals significant association.
Published in:
BMC Microbiology, 2022, v. 22, n. 1, p. 1, doi. 10.1186/s12866-022-02714-8
By:
- Al-Muhanna, Fahad A.;
- Dowdell, Alexa K.;
- Al Eleq, Abdulmohsen H.;
- Albaker, Waleed I.;
- Brooks, Andrew W.;
- Al-Sultan, Ali I.;
- Al-Rubaish, Abdullah M.;
- Alkharsah, Khaled R.;
- Sulaiman, Raed M.;
- Al-Quorain, Abdulaziz A.;
- Cyrus, Cyril;
- Alali, Rudaynah A.;
- Vatte, Chittibabu;
- Robinson, Fred L.;
- Zhou, Xin;
- Snyder, Michael P.;
- Almuhanna, Afnan F.;
- Keating, Brendan J.;
- Piening, Brian D.;
- Al-Ali, Amein K.
Publication type:
Article
Network analyses identify liver-specific targets for treating liver diseases.
Published in:
Molecular Systems Biology, 2017, v. 13, n. 8, p. n/a, doi. 10.15252/msb.20177703
By:
- Lee, Sunjae;
- Zhang, Cheng;
- Liu, Zhengtao;
- Klevstig, Martina;
- Mukhopadhyay, Bani;
- Bergentall, Mattias;
- Cinar, Resat;
- Ståhlman, Marcus;
- Sikanic, Natasha;
- Park, Joshua K;
- Deshmukh, Sumit;
- Harzandi, Azadeh M;
- Kuijpers, Tim;
- Grøtli, Morten;
- Elsässer, Simon J;
- Piening, Brian D;
- Snyder, Michael;
- Smith, Ulf;
- Nielsen, Jens;
- Bäckhed, Fredrik
Publication type:
Article
New Clues to Human Longevity.
Published in:
Clinical Chemistry, 2018, v. 64, n. 2, p. 418, doi. 10.1373/clinchem.2017.282020
By:
- Piening, Brian D.
Publication type:
Article
Cancer microenvironment and genomics: evolution in process.
Published in:
Clinical & Experimental Metastasis, 2022, v. 39, n. 1, p. 85, doi. 10.1007/s10585-021-10097-9
By:
- Leong, Stanley P.;
- Witz, Isaac P.;
- Sagi-Assif, Orit;
- Izraely, Sivan;
- Sleeman, Jonathan;
- Piening, Brian;
- Fox, Bernard A.;
- Bifulco, Carlo B.;
- Martini, Rachel;
- Newman, Lisa;
- Davis, Melissa;
- Sanders, Lauren M.;
- Haussler, David;
- Vaske, Olena M.;
- Witte, Marlys
Publication type:
Article
Human‐engineered Treg‐like cells suppress FOXP3‐deficient T cells but preserve adaptive immune responses in vivo.
Published in:
Clinical & Translational Immunology, 2020, v. 9, n. 11, p. 1, doi. 10.1002/cti2.1214
By:
- Sato, Yohei;
- Passerini, Laura;
- Piening, Brian D;
- Uyeda, Molly Javier;
- Goodwin, Marianne;
- Gregori, Silvia;
- Snyder, Michael P;
- Bertaina, Alice;
- Roncarolo, Maria‐Grazia;
- Bacchetta, Rosa
Publication type:
Article
DNA Replication Stress Phosphoproteome Profiles Reveal Novel Functional Phosphorylation Sites on Xrs2 in Saccharomyces cerevisiae.
Published in:
Genetics, 2016, v. 203, n. 1, p. 353, doi. 10.1534/genetics.115.185231
By:
- Dongqing Huang;
- Piening, Brian D.;
- Kennedy, Jacob J.;
- Chenwei Lin;
- Jones-Weinert, Corey W.;
- Ping Yan;
- Paulovich, Amanda G.
Publication type:
Article
iNetModels 2.0: an interactive visualization and database of multi-omics data.
Published in:
Nucleic Acids Research, 2021, v. 49, n. W1, p. W271, doi. 10.1093/nar/gkab254
By:
- Arif, Muhammad;
- Zhang, Cheng;
- Li, Xiangyu;
- Güngör, Cem;
- Çakmak, Buğra;
- Arslantürk, Metin;
- Tebani, Abdellah;
- Özcan, Berkay;
- Subaş, Oğuzhan;
- Zhou, Wenyu;
- Piening, Brian;
- Turkez, Hasan;
- Fagerberg, Linn;
- Price, Nathan;
- Hood, Leroy;
- Snyder, Michael;
- Nielsen, Jens;
- Uhlen, Mathias;
- Mardinoglu, Adil
Publication type:
Article
Systematic review of transcriptome and microRNAome associations with gestational diabetes mellitus.
Published in:
Frontiers in Endocrinology, 2023, v. 13, p. 1, doi. 10.3389/fendo.2022.971354
By:
- Lewis, Kimberly A.;
- Chang, Lisa;
- Cheung, Julinna;
- Aouizerat, Bradley E.;
- Jelliffe-Pawlowski, Laura L.;
- McLemore, Monica R.;
- Piening, Brian;
- Rand, Larry;
- Ryckman, Kelli K.;
- Flowers, Elena
Publication type:
Article
A Random Forest Genomic Classifier for Tumor Agnostic Prediction of Response to Anti-PD1 Immunotherapy.
Published in:
Cancer Informatics, 2022, v. 21, p. 1, doi. 10.1177/11769351221136081
By:
- Bigelow, Emma;
- Saria, Suchi;
- Piening, Brian;
- Curti, Brendan;
- Dowdell, Alexa;
- Weerasinghe, Roshanthi;
- Bifulco, Carlo;
- Urba, Walter;
- Finkelstein, Noam;
- Fertig, Elana J.;
- Baras, Alex;
- Zaidi, Neeha;
- Jaffee, Elizabeth;
- Yarchoan, Mark
Publication type:
Article
Unsupervised mRNA‐seq classification of heart transplant endomyocardial biopsies.
Published in:
Clinical Transplantation, 2023, v. 37, n. 9, p. 1, doi. 10.1111/ctr.15011
By:
- Romero, Erick;
- Tabak, Esteban;
- Fishbein, Gregory;
- Litovsky, Silvio;
- Tallaj, Jose;
- Liem, David;
- Bakir, Maral;
- Khachatoorian, Yeraz;
- Piening, Brian;
- Keating, Brendan;
- Deng, Mario;
- Cadeiras, Martin
Publication type:
Article
A Random Forest Genomic Classifier for Tumor Agnostic Prediction of Response to Anti-PD1 Immunotherapy.
Published in:
Cancer Informatics, 2022, v. 21, p. 1, doi. 10.1177/11769351221136081
By:
- Bigelow, Emma;
- Saria, Suchi;
- Piening, Brian;
- Curti, Brendan;
- Dowdell, Alexa;
- Weerasinghe, Roshanthi;
- Bifulco, Carlo;
- Urba, Walter;
- Finkelstein, Noam;
- Fertig, Elana J;
- Baras, Alex;
- Zaidi, Neeha;
- Jaffee, Elizabeth;
- Yarchoan, Mark
Publication type:
Article
Gut microbiota analyses of inflammatory bowel diseases from a representative Saudi population.
Published in:
BMC Gastroenterology, 2023, v. 23, n. 1, p. 1, doi. 10.1186/s12876-023-02904-2
By:
- Alsulaiman, Raed M.;
- Al-Quorain, Abdulaziz A.;
- Al-Muhanna, Fahad A.;
- Piotrowski, Stanley;
- Kurdi, Ezzeddin A.;
- Vatte, Chittibabu;
- Alquorain, Ahmed A.;
- Alfaraj, Noorah H.;
- Alrezuk, Abdulaziz M.;
- Robinson, Fred;
- Dowdell, Alexa K.;
- Alamri, Turki A.;
- Hamilton, Lauren;
- Lad, Hetal;
- Gao, Hui;
- Gandla, Divya;
- Keating, Brendan J.;
- Meng, Ryan;
- Piening, Brian;
- Al-Ali, Amein K.
Publication type:
Article

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