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Dense genotyping identifies and localizes multiple common and rare variant association signals in celiac disease.
Published in:
Nature Genetics, 2011, v. 43, n. 12, p. 1193, doi. 10.1038/ng.998
By:
- Trynka, Gosia;
- Hunt, Karen A;
- Bockett, Nicholas A;
- Romanos, Jihane;
- Mistry, Vanisha;
- Szperl, Agata;
- Bakker, Sjoerd F;
- Bardella, Maria Teresa;
- Bhaw-Rosun, Leena;
- Castillejo, Gemma;
- de la Concha, Emilio G;
- de Almeida, Rodrigo Coutinho;
- Dias, Kerith-Rae M;
- van Diemen, Cleo C;
- Dubois, Patrick C A;
- Duerr, Richard H;
- Edkins, Sarah;
- Franke, Lude;
- Fransen, Karin;
- Gutierrez, Javier
Publication type:
Article
Deletion polymorphism upstream of IRGM associated with altered IRGM expression and Crohn's disease.
Published in:
Nature Genetics, 2008, v. 40, n. 9, p. 1107, doi. 10.1038/ng.215
By:
- McCarroll, Steven A.;
- Huett, Alan;
- Kuballa, Petric;
- Chilewski, Shannon D.;
- Landry, Aimee;
- Goyette, Philippe;
- Zody, Michael C.;
- Hall, Jennifer L.;
- Brant, Steven R.;
- Cho, Judy H.;
- Duerr, Richard H.;
- Silverberg, Mark S.;
- Taylor, Kent D.;
- Rioux, John D.;
- Altshuler, David;
- Daly, Mark J.;
- Xavier, Ramnik J.
Publication type:
Article
Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease.
Published in:
Nature Genetics, 2008, v. 40, n. 8, p. 955, doi. 10.1038/ng.175
By:
- Barrett, Jeffrey C.;
- Hansoul, Sarah;
- Nicolae, Dan L.;
- Cho, Judy H.;
- Duerr, Richard H.;
- Rioux, John D.;
- Brant, Steven R.;
- Silverberg, Mark S.;
- Taylor, Kent D.;
- Barmada, M. Michael;
- Bitton, Alain;
- Dassopoulos, Themistocles;
- Datta, Lisa Wu;
- Green, Todd;
- Griffiths, Anne M.;
- Kistner, Emily O.;
- Murtha, Michael T.;
- Regueiro, Miguel D.;
- Rotter, Jerome I.;
- Schumm, L. Philip
Publication type:
Article
Comprehensive benchmarking of CITE-seq versus DOGMA-seq single cell multimodal omics.
Published in:
Genome Biology, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s13059-022-02698-8
By:
- Xu, Zhongli;
- Heidrich-O'Hare, Elisa;
- Chen, Wei;
- Duerr, Richard H.
Publication type:
Article
PTGER4 Expression-Modulating Polymorphisms in the 5p13.1 Region Predispose to Crohn's Disease and Affect NF-κB and XBP1 Binding Sites.
Published in:
PLoS ONE, 2012, v. 7, n. 12, p. 1, doi. 10.1371/journal.pone.0052873
By:
- Glas, Jürgen;
- Seiderer, Julia;
- Czamara, Darina;
- Pasciuto, Giulia;
- Diegelmann, Julia;
- Wetzke, Martin;
- Olszak, Torsten;
- Wolf, Christiane;
- Müller-Myhsok, Bertram;
- Balschun, Tobias;
- Achkar, Jean-Paul;
- Kamboh, M. Ilyas;
- Franke, Andre;
- Duerr, Richard H.;
- Brand, Stephan
Publication type:
Article
Identification of genetic loci for basal cell nevus syndrome and inflammatory bowel disease in a single large pedigree.
Published in:
Human Genetics, 2006, v. 120, n. 1, p. 31, doi. 10.1007/s00439-006-0163-8
By:
- Panhuysen, Carolien I.;
- Karban, Amir;
- Manning, Alisa Knodle;
- Bayless, Theodore M.;
- Duerr, Richard H.;
- Bailey-Wilson, Joan E.;
- Epstein Jr., Ervin H.;
- Brant, Steven R.
Publication type:
Article
Refined genomic localization and ethnic differences observed for the IBD5 association with Crohn's disease.
Published in:
European Journal of Human Genetics, 2007, v. 15, n. 3, p. 328, doi. 10.1038/sj.ejhg.5201756
By:
- Silverberg, Mark S.;
- Duerr, Richard H.;
- Brant, Steven R.;
- Bromfield, Gillian;
- Datta, Lisa W.;
- Jani, Niraj;
- Kane, Sunanda V.;
- Rotter, Jerome I.;
- Schumm, L. Philip;
- Steinhart, A. Hillary;
- Taylor, Kent D.;
- Yang, Huiying;
- Cho, Judy H.;
- Rioux, John D.;
- Daly, Mark J.
Publication type:
Article
A frameshift mutation in NOD2 associated with susceptibility to Crohn's disease.
Published in:
Nature, 2001, v. 411, n. 6837, p. 603, doi. 10.1038/35079114
By:
- Ogura, Yasunori;
- Bonen, Denise K.;
- Inohara, Naohiro;
- Nicolae, Dan L.;
- Chen, Felicia F.;
- Ramos, Richard;
- Britton, Heidi;
- Moran, Thomas;
- Karaliuskas, Reda;
- Duerr, Richard H.;
- Achkar, Jean-Paul;
- Brant, Steven R.;
- Bayless, Theodore M.;
- Kirschner, Barbara S.;
- Hanauer, Stephen B.;
- Nunez, Gabriel;
- Cho, Judy H.
Publication type:
Article
Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease.
Published in:
Nature, 2012, v. 491, n. 7422, p. 119, doi. 10.1038/nature11582
By:
- Jostins, Luke;
- Ripke, Stephan;
- Weersma, Rinse K.;
- Duerr, Richard H.;
- McGovern, Dermot P.;
- Hui, Ken Y.;
- Lee, James C.;
- Philip Schumm, L.;
- Sharma, Yashoda;
- Anderson, Carl A.;
- Essers, Jonah;
- Mitrovic, Mitja;
- Ning, Kaida;
- Cleynen, Isabelle;
- Theatre, Emilie;
- Spain, Sarah L.;
- Raychaudhuri, Soumya;
- Goyette, Philippe;
- Wei, Zhi;
- Abraham, Clara
Publication type:
Article
BREM-SC: a bayesian random effects mixture model for joint clustering single cell multi-omics data.
Published in:
Nucleic Acids Research, 2020, v. 48, n. 11, p. 5814, doi. 10.1093/nar/gkaa314
By:
- Wang, Xinjun;
- Sun, Zhe;
- Zhang, Yanfu;
- Xu, Zhongli;
- Xin, Hongyi;
- Huang, Heng;
- Duerr, Richard H;
- Chen, Kong;
- Ding, Ying;
- Chen, Wei
Publication type:
Article
Deep Resequencing of GWAS Loci Identifies Rare Variants in CARD9, IL23R and RNF186 That Are Associated with Ulcerative Colitis.
Published in:
PLoS Genetics, 2013, v. 9, n. 9, p. 1, doi. 10.1371/journal.pgen.1003723
By:
- Beaudoin, Mélissa;
- Goyette, Philippe;
- Boucher, Gabrielle;
- Lo, Ken Sin;
- Rivas, Manuel A.;
- Stevens, Christine;
- Alikashani, Azadeh;
- Ladouceur, Martin;
- Ellinghaus, David;
- Törkvist, Leif;
- Goel, Gautam;
- Lagacé, Caroline;
- Annese, Vito;
- Bitton, Alain;
- Begun, Jakob;
- Brant, Steve R.;
- Bresso, Francesca;
- Cho, Judy H.;
- Duerr, Richard H.;
- Halfvarson, Jonas
Publication type:
Article
A Genome-Wide Scan of Ashkenazi Jewish Crohn's Disease Suggests Novel Susceptibility Loci.
Published in:
PLoS Genetics, 2012, v. 8, n. 3, p. 1, doi. 10.1371/journal.pgen.1002559
By:
- Kenny, Eimear E.;
- Pe'er, Itsik;
- Karban, Amir;
- Ozelius, Laurie;
- Mitchell, Adele A.;
- Sok Meng Ng;
- Erazo, Monica;
- Ostrer, Harry;
- Abraham, Clara;
- Abreu, Maria T.;
- Atzmon, Gil;
- Barzilai, Nir;
- Brant, Steven R.;
- Bressman, Susan;
- Burns, Edward R.;
- Chowers, Yehuda;
- Clark, Lorraine N.;
- Darvasi, Ariel;
- Doheny, Dana;
- Duerr, Richard H.
Publication type:
Article
Functional annotation of a novel NFKB1 promoter polymorphism that increases risk for ulcerative colitis.
Published in:
Human Molecular Genetics, 2004, v. 13, n. 1, p. 35, doi. 10.1093/hmg/ddh008
By:
- Karban, Amir S.;
- Okazaki, Toshihiko;
- Panhuysen, Carolien I.M.;
- Gallegos, Thomas;
- Potter, James J.;
- Bailey-Wilson, Joan E.;
- Silverberg, Mark S.;
- Duerr, Richard H.;
- Cho, Judy H.;
- Gregersen, Peter K.;
- Wu, Yuqiong;
- Achkar, Jean-Paul;
- Dassopoulos, Themistocles;
- Mezey, Esteban;
- Bayless, Theodore M.;
- Nouvet, Franklin J.;
- Brant, Steven R.
Publication type:
Article
Evidence for an inflammatory bowel disease locus on chromosome 3p26: linkage, transmission/disequilibrium and partitioning of linkage.
Published in:
Human Molecular Genetics, 2002, v. 11, n. 21, p. 2599, doi. 10.1093/hmg/11.21.2599
By:
- Duerr, Richard H.;
- Barmada, M. Michael;
- Zhang, Leilei;
- Achkar, Jean-Paul;
- Cho, Judy H.;
- Hanauer, Stephen B.;
- Brant, Steven R.;
- Bayless, Theodore M.;
- Baldassano, Robert N.;
- Weeks, Daniel E.
Publication type:
Article
A unified model-based framework for doublet or multiplet detection in single-cell multiomics data.
Published in:
Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-49448-x
By:
- Hu, Haoran;
- Wang, Xinjun;
- Feng, Site;
- Xu, Zhongli;
- Liu, Jing;
- Heidrich-O'Hare, Elisa;
- Chen, Yanshuo;
- Yue, Molin;
- Zeng, Lang;
- Rong, Ziqi;
- Chen, Tianmeng;
- Billiar, Timothy;
- Ding, Ying;
- Huang, Heng;
- Duerr, Richard H.;
- Chen, Wei
Publication type:
Article
GMM-Demux: sample demultiplexing, multiplet detection, experiment planning, and novel cell-type verification in single cell sequencing.
Published in:
Genome Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s13059-020-02084-2
By:
- Xin, Hongyi;
- Lian, Qiuyu;
- Jiang, Yale;
- Luo, Jiadi;
- Wang, Xinjun;
- Erb, Carla;
- Xu, Zhongli;
- Zhang, Xiaoyi;
- Heidrich-O'Hare, Elisa;
- Yan, Qi;
- Duerr, Richard H.;
- Chen, Kong;
- Chen, Wei
Publication type:
Article
GMM-Demux: sample demultiplexing, multiplet detection, experiment planning, and novel cell-type verification in single cell sequencing.
Published in:
Genome Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s13059-020-02084-2
By:
- Xin, Hongyi;
- Lian, Qiuyu;
- Jiang, Yale;
- Luo, Jiadi;
- Wang, Xinjun;
- Erb, Carla;
- Xu, Zhongli;
- Zhang, Xiaoyi;
- Heidrich-O’Hare, Elisa;
- Yan, Qi;
- Duerr, Richard H.;
- Chen, Kong;
- Chen, Wei
Publication type:
Article
Clinical Predictors of Early and Late Endoscopic Recurrence Following Ileocolonic Resection in Crohn's Disease.
Published in:
Journal of Crohn's & Colitis, 2024, v. 18, n. 4, p. 615, doi. 10.1093/ecco-jcc/jjad186
By:
- Hernández-Rocha, Cristian;
- Walshe, Margaret;
- Birch, Sondra;
- Sabic, Ksenija;
- Korie, Ujunwa;
- Chasteau, Colleen;
- Miladinova, Vessela M;
- Sabol, William B;
- Mengesha, Emebet;
- Hanna, Mary;
- Pozdnyakova, Valeriya;
- Datta, Lisa;
- Kohen, Rita;
- Milgrom, Raquel;
- Stempak, Joanne M;
- Bitton, Alain;
- Brant, Steven R;
- Rioux, John D;
- McGovern, Dermot P B;
- Duerr, Richard H
Publication type:
Article
Role for CXCR3 Ligands as Biomarkers of Post-Operative Crohn's Disease Recurrence.
Published in:
Journal of Crohn's & Colitis, 2022, v. 16, n. 6, p. 900, doi. 10.1093/ecco-jcc/jjab186
By:
- Walshe, Margaret;
- Nayeri, Shadi;
- Ji, Jiayi;
- Hernandez-Rocha, Cristian;
- Sabic, Ksenija;
- Hu, Liangyuan;
- Giri, Mamta;
- Nayar, Shikha;
- Brant, Steven;
- McGovern, Dermot P B;
- Rioux, John D;
- Duerr, Richard H;
- Cho, Judy H;
- Schumm, Phil L;
- Lazarev, Mark;
- Silverberg, Mark S
Publication type:
Article
Ocular Manifestations in Inflammatory Bowel Disease Are Associated with Other Extraintestinal Manifestations, Gender, and Genes Implicated in Other Immune-related Traits.
Published in:
Journal of Crohn's & Colitis, 2016, v. 10, n. 1, p. 43, doi. 10.1093/ecco-jcc/jjv178
By:
- Taleban, Sasha;
- Dalin Li;
- Targan, Stephan R.;
- Ippoliti, Andrew;
- Brant, Steven R.;
- Cho, Judy H.;
- Duerr, Richard H.;
- Rioux, John D.;
- Silverberg, Mark S.;
- Vasiliauskas, Eric A.;
- Rotter, Jerome I.;
- Haritunians, Talin;
- Shih, David Q.;
- Dubinsky, Marla;
- Melmed, Gil Y.;
- McGovern, Dermot P. B.
Publication type:
Article
Relationship Between Proximal Crohn's Disease Location and Disease Behavior and Surgery: A Cross-Sectional Study of the IBD Genetics Consortium.
Published in:
American Journal of Gastroenterology (Springer Nature), 2013, v. 108, n. 1, p. 106, doi. 10.1038/ajg.2012.389
By:
- Lazarev, Mark;
- Huang, Chengrui;
- Bitton, Alain;
- Cho, Judy H;
- Duerr, Richard H;
- McGovern, Dermot P;
- Proctor, Deborah D;
- Regueiro, Miguel;
- Rioux, John D;
- Schumm, Philip P;
- Taylor, Kent D;
- Silverberg, Mark S;
- Steinhart, A Hillary;
- Hutfless, Susan;
- Brant, Steven R
Publication type:
Article
NOD2 Gene Polymorphism rs2066844 Associates With Need for Combined Liver-Intestine Transplantation in Children With Short-Gut Syndrome.
Published in:
American Journal of Gastroenterology (Springer Nature), 2011, v. 106, n. 1, p. 157, doi. 10.1038/ajg.2010.322
By:
- Ningappa, Mylarappa;
- Higgs, Brandon W.;
- Weeks, Daniel E.;
- Ashokkumar, Chethan;
- Duerr, Richard H.;
- Qing Sun;
- Soltys, Kyle A.;
- Bond, Geoffrey J.;
- Abu-Elmagd, Kareem;
- Mazariegos, George V.;
- Alissa, Feras;
- Rivera, Marcus;
- Rudolph, Jeffrey;
- Squires, Robert;
- Hakonarson, Hakon;
- Sindhi, Rakesh
Publication type:
Article
Phenotype-Stratified Genetic Linkage Study Demonstrates that IBD2 Is an Extensive Ulcerative Colitis Locus.
Published in:
American Journal of Gastroenterology (Springer Nature), 2006, v. 101, n. 3, p. 572, doi. 10.1111/j.1572-0241.2006.00451.x
By:
- Achkar, Jean-Paul;
- Dassopoulos, Themistocles;
- Silverberg, Mark S.;
- Tuvlin, Jeffrey A.;
- Duerr, Richard H.;
- Brant, Steven R.;
- Siminovitch, Kathy;
- Reddy, Deepa;
- Datta, Lisa W.;
- Bayless, Theodore M.;
- Leilei Zhang;
- Barmada, M. Michael;
- Rioux, John D.;
- Steinhart, A. Hillary;
- McLeod, Robin S.;
- Griffiths, Anne M.;
- Cohen, Zane;
- Huiying Yang;
- Bromfield, Gillian P.;
- Schumm, Phil
Publication type:
Article
Perinuclear neutrophil antibodies are not markers for genetic susceptibility or indicators of genetic heterogeneity in familial ulcerative colitis
Published in:
American Journal of Gastroenterology (Springer Nature), 2002, v. 97, n. 9, p. 2343, doi. 10.1111/j.1572-0241.2002.05989.x
By:
- Achkar, Jean-Paul;
- Barmada, M. Michael;
- Duerr, Richard H.
Publication type:
Article

Found: 24

Dense genotyping identifies and localizes multiple common and rare variant association signals in celiac disease.

Deletion polymorphism upstream of IRGM associated with altered IRGM expression and Crohn's disease.

Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease.

Comprehensive benchmarking of CITE-seq versus DOGMA-seq single cell multimodal omics.

PTGER4 Expression-Modulating Polymorphisms in the 5p13.1 Region Predispose to Crohn's Disease and Affect NF-κB and XBP1 Binding Sites.

Identification of genetic loci for basal cell nevus syndrome and inflammatory bowel disease in a single large pedigree.

Refined genomic localization and ethnic differences observed for the IBD5 association with Crohn's disease.

A frameshift mutation in NOD2 associated with susceptibility to Crohn's disease.

Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease.

BREM-SC: a bayesian random effects mixture model for joint clustering single cell multi-omics data.

Deep Resequencing of GWAS Loci Identifies Rare Variants in <i>CARD9</i>, <i>IL23R</i> and <i>RNF186</i> That Are Associated with Ulcerative Colitis.

A Genome-Wide Scan of Ashkenazi Jewish Crohn's Disease Suggests Novel Susceptibility Loci.

Functional annotation of a novel NFKB1 promoter polymorphism that increases risk for ulcerative colitis.

Evidence for an inflammatory bowel disease locus on chromosome 3p26: linkage, transmission/disequilibrium and partitioning of linkage.

A unified model-based framework for doublet or multiplet detection in single-cell multiomics data.

GMM-Demux: sample demultiplexing, multiplet detection, experiment planning, and novel cell-type verification in single cell sequencing.

GMM-Demux: sample demultiplexing, multiplet detection, experiment planning, and novel cell-type verification in single cell sequencing.

Clinical Predictors of Early and Late Endoscopic Recurrence Following Ileocolonic Resection in Crohn's Disease.

Role for CXCR3 Ligands as Biomarkers of Post-Operative Crohn's Disease Recurrence.

Ocular Manifestations in Inflammatory Bowel Disease Are Associated with Other Extraintestinal Manifestations, Gender, and Genes Implicated in Other Immune-related Traits.

Relationship Between Proximal Crohn's Disease Location and Disease Behavior and Surgery: A Cross-Sectional Study of the IBD Genetics Consortium.

NOD2 Gene Polymorphism rs2066844 Associates With Need for Combined Liver-Intestine Transplantation in Children With Short-Gut Syndrome.

Phenotype-Stratified Genetic Linkage Study Demonstrates that IBD2 Is an Extensive Ulcerative Colitis Locus.

Perinuclear neutrophil antibodies are not markers for genetic susceptibility or indicators of genetic heterogeneity in familial ulcerative colitis