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PROPER: Performance visualization for optimizing and comparing ranking classifiers in MATLAB.
- Published in:
- Source Code for Biology & Medicine, 2015, v. 10, p. 1, doi. 10.1186/s13029-015-0047-1
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- Article
Cancer3D 2.0: interactive analysis of 3D patterns of cancer mutations in cancer subsets.
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- Nucleic Acids Research, 2019, v. 47, n. D1, p. D895, doi. 10.1093/nar/gky1098
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- Article
PDBFlex: exploring flexibility in protein structures.
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- Nucleic Acids Research, 2016, v. 44, p. D423, doi. 10.1093/nar/gkv1316
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- Article
AIDA: ab initio domain assembly server.
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- Nucleic Acids Research, 2014, v. 42, n. W1, p. W308, doi. 10.1093/nar/gku369
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- Article
PubServer: literature searches by homology.
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- Nucleic Acids Research, 2014, v. 42, n. W1, p. W430, doi. 10.1093/nar/gku450
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- Article
FFAS server: novel features and applications.
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- Nucleic Acids Research, 2011, v. 39, n. suppl_2, p. W38, doi. 10.1093/nar/gkr441
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- Article
Structure of a Novel Winged-Helix Like Domain from Human NFRKB Protein.
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- PLoS ONE, 2012, v. 7, n. 9, p. 1, doi. 10.1371/journal.pone.0043761
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- Article
Structure of an MmyB-Like Regulator from C. aurantiacus, Member of a New Transcription Factor Family Linked to Antibiotic Metabolism in Actinomycetes.
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- PLoS ONE, 2012, v. 7, n. 7, p. 1, doi. 10.1371/journal.pone.0041359
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- Article
Structural Analysis of Papain-Like NlpC/P60 Superfamily Enzymes with a Circularly Permuted Topology Reveals Potential Lipid Binding Sites.
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- PLoS ONE, 2011, v. 6, n. 7, p. 1, doi. 10.1371/journal.pone.0022013
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- Article
Structural and Sequence Analysis of Imelysin-Like Proteins Implicated in Bacterial Iron Uptake.
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- PLoS ONE, 2011, v. 6, n. 7, p. 1, doi. 10.1371/journal.pone.0021875
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- Article
Crystal structure of a putative quorum sensing-regulated protein (PA3611) from the Pseudomonas-specific DUF4146 family.
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- Proteins, 2014, v. 82, n. 6, p. 1086, doi. 10.1002/prot.24455
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- Article
Crystal structure of a member of a novel family of dioxygenases (PF10014) reveals a conserved cupin fold and active site.
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- Proteins, 2014, v. 82, n. 1, p. 164, doi. 10.1002/prot.24362
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- Article
Internal organization of large protein families: Relationship between the sequence, structure, and function-based clustering.
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- Proteins, 2011, v. 79, n. 8, p. 2389, doi. 10.1002/prot.23049
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- Article
Crystal structure of a novel archaeal AAA+ ATPase SSO1545 from Sulfolobus solfataricus.
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- Proteins, 2009, v. 74, n. 4, p. 1041, doi. 10.1002/prot.22325
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- Article
Crystal structure of an ADP-ribosylated protein with a cytidine deaminase-like fold, but unknown function (TM1506), from Thermotoga maritima at 2.70 Å resolution.
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- Proteins, 2008, v. 71, n. 3, p. 1546, doi. 10.1002/prot.21992
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- Article
Crystal structure of AICAR transformylase IMP cyclohydrolase (TM1249) from Thermotoga maritima at 1.88 Å resolution.
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- Proteins, 2008, v. 71, n. 2, p. 1042, doi. 10.1002/prot.21967
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- Article
Crystal structure of 2-keto-3-deoxygluconate kinase (TM0067) from Thermotoga maritima at 2.05 Å resolution.
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- Proteins, 2008, v. 70, n. 2, p. 603, doi. 10.1002/prot.21842
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- Article
Crystal structure of a transcription regulator (TM1602) from Thermotoga maritima at 2.3 Å resolution.
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- Proteins, 2007, v. 67, n. 1, p. 247, doi. 10.1002/prot.21221
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- Article
Crystal structure of phosphoribosylformyl-glycinamidine synthase II, PurS subunit (TM1244) from Thermotoga maritima at 1.90 Å resolution.
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- Proteins, 2006, v. 65, n. 1, p. 249, doi. 10.1002/prot.21024
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- Article
Crystal structure of a glycerate kinase (TM1585) from Thermotoga maritima at 2.70 Å resolution reveals a new fold.
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- Proteins, 2006, v. 65, n. 1, p. 243, doi. 10.1002/prot.21058
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- Article
Crystal structure of the ApbE protein (TM1553) from Thermotoga maritima at 1.58 Å resolution.
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- Proteins, 2006, v. 64, n. 4, p. 1083, doi. 10.1002/prot.20950
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- Article
Crystal structure of phosphoribosylformylglycinamidine synthase II (smPurL) from Thermotoga maritima at 2.15 Å resolution.
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- Proteins, 2006, v. 63, n. 4, p. 1106, doi. 10.1002/prot.20650
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- Article
Crystal structure of a single-stranded DNA-binding protein (TM0604) from Thermotoga maritima at 2.60 Å resolution.
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- Proteins, 2006, v. 63, n. 1, p. 256, doi. 10.1002/prot.20841
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- Article
Crystal structure of Hsp33 chaperone (TM1394) from Thermotoga maritima at 2.20 Å resolution.
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- Proteins, 2005, v. 61, n. 3, p. 669, doi. 10.1002/prot.20542
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- Article
Crystal structure of an alanine-glyoxylate aminotransferase from Anabaena sp. at 1.70 Å resolution reveals a noncovalently linked PLP cofactor.
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- Proteins, 2005, v. 58, n. 4, p. 971, doi. 10.1002/prot.20360
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- Article
Crystal structure of a formiminotetrahydrofolate cyclodeaminase (TM1560) from Thermotoga maritima at 2.80 Å resolution reveals a new fold.
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- Proteins, 2005, v. 58, n. 4, p. 976, doi. 10.1002/prot.20364
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- Article
Crystal structure of a novel Thermotoga maritima enzyme (TM1112) from the cupin family at 1.83 Å resolution.
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- Proteins, 2004, v. 56, n. 3, p. 615, doi. 10.1002/prot.20139
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- Article
Crystal structure of a novel manganese-containing cupin (TM1459) from Thermotoga maritima at 1.65 Å resolution.
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- Proteins, 2004, v. 56, n. 3, p. 611, doi. 10.1002/prot.20130
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- Article
Crystal structure of a putative NADPH-dependent oxidoreductase (GI: 18204011) from mouse at 2.10 Å resolution.
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- Proteins, 2004, v. 56, n. 3, p. 629, doi. 10.1002/prot.20163
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- Article
Crystal structure of an orphan protein (TM0875) from Thermotoga maritima at 2.00-Å resolution reveals a new fold.
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- Proteins, 2004, v. 56, n. 3, p. 607, doi. 10.1002/prot.20138
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- Article
Crystal structure of a PIN (PilT N-terminus) domain (AF0591) from Archaeoglobus fulgidus at 1.90 Å resolution.
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- Proteins, 2004, v. 56, n. 2, p. 404, doi. 10.1002/prot.20090
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- Article
Crystal structure of O-acetylserine sulfhydrylase (TM0665) from Thermotoga maritima at 1.8 Å resolution.
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- Proteins, 2004, v. 56, n. 2, p. 387, doi. 10.1002/prot.20003
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- Article
Crystal structure of a putative oxalate decarboxylase (TM1287) from Thermotoga maritima at 1.95 Å resolution.
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- Proteins, 2004, v. 56, n. 2, p. 392, doi. 10.1002/prot.20016
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- Article
Crystal structure of a methionine aminopeptidase (TM1478) from Thermotoga maritima at 1.9 Å resolution.
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- Proteins, 2004, v. 56, n. 2, p. 396, doi. 10.1002/prot.20084
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- Article
Crystal structure of a ribose-5-phosphate isomerase RpiB (TM1080) from Thermotoga maritima at 1.90 Å resolution.
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- Proteins, 2004, v. 56, n. 1, p. 171, doi. 10.1002/prot.20129
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- Article
Crystal structure of a glycerophosphodiester phosphodiesterase (GDPD) from Thermotoga maritima (TM1621) at 1.60 Å resolution.
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- Proteins, 2004, v. 56, n. 1, p. 167, doi. 10.1002/prot.20120
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- Article
Crystal structure of an aspartate aminotransferase (TM1255) from Thermotoga maritima at 1.90 Å resolution.
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- Proteins, 2004, v. 55, n. 3, p. 759, doi. 10.1002/prot.10646
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- Article
Crystal structure of a type II quinolic acid phosphoribosyltransferase (TM1645) from Thermotoga maritima at 2.50 Å resolution.
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- Proteins, 2004, v. 55, n. 3, p. 768, doi. 10.1002/prot.20029
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- Article
Crystal structure of a phosphoribosylaminoimidazole mutase PurE (TM0446) from Thermotoga maritima at 1.77-Å resolution.
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- Proteins, 2004, v. 55, n. 2, p. 474, doi. 10.1002/prot.20023
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- Article
Crystal structure of a putative PII-like signaling protein (TM0021) from Thermotoga maritima at 2.5 Å resolution.
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- Proteins, 2004, v. 54, n. 4, p. 810
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- Article
Crystal structure of a putative glutamine amido transferase (TM1158) from Thermotoga maritima at 1.7 Å resolution.
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- Proteins, 2004, v. 54, n. 4, p. 801
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- Article
Crystal structure of an iron-containing 1,3-propanediol dehydrogenase (TM0920) from Thermotoga maritima at 1.3 Å resolution.
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- Proteins, 2004, v. 54, n. 1, p. 174, doi. 10.1002/prot.10594
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- Article
Crystal structure of uronate isomerase (TM0064) from Thermotoga maritima at 2.85 Å resolution.
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- Proteins, 2003, v. 53, n. 1, p. 142
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- Article
Crystal structure of a zinc-containing glycerol dehydrogenase (TM0423) from Thermotoga maritima at 1.5 Å resolution.
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- Proteins, 2003, v. 50, n. 2, p. 371, doi. 10.1002/prot.10302
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- Article
Crystal structure of thy1, a thymidylate synthase complementing protein from Thermotoga maritima at 2.25 Å resolution.
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- Proteins, 2002, v. 49, n. 1, p. 142, doi. 10.1002/prot.10202
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- Article
ATP-activated oligomerization as a mechanism for apoptosis regulation: Fold and mechanism prediction for CED-4.
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- Proteins, 2000, v. 39, n. 3, p. 197, doi. 10.1002/(SICI)1097-0134(20000515)39:3<197::AID-PROT10>3.0.CO;2-V
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- Article
Structure of the pilus assembly protein TadZ from Eubacterium rectale: implications for polar localization.
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- Molecular Microbiology, 2012, v. 83, n. 4, p. 712, doi. 10.1111/j.1365-2958.2011.07954.x
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- Article
Resistin Concentration in Early Sepsis and All-Cause Mortality at a Safety-Net Hospital in Riverside County.
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- Journal of Inflammation Research, 2022, v. 15, p. 3925, doi. 10.2147/JIR.S370788
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- Article
Two Pfam protein families characterized by a crystal structure of protein lpg2210 from Legionella pneumophila.
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- BMC Bioinformatics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2105-14-265
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Integrated web service for improving alignment quality based on segments comparison.
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- BMC Bioinformatics, 2004, v. 5, p. 98, doi. 10.1186/1471-2105-5-98
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- Article