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Early stages of sympatric homoploid hybrid speciation in crater lake cichlid fishes.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-33319-4
By:
- Olave, Melisa;
- Nater, Alexander;
- Kautt, Andreas F.;
- Meyer, Axel
Publication type:
Article
Fitness adaptations of Japanese encephalitis virus in pigs following vector-free serial passaging.
Published in:
PLoS Pathogens, 2024, v. 20, n. 8, p. 1, doi. 10.1371/journal.ppat.1012059
By:
- Marti, Andrea;
- Nater, Alexander;
- Pego Magalhaes, Jenny;
- Almeida, Lea;
- Lewandowska, Marta;
- Liniger, Matthias;
- Ruggli, Nicolas;
- Grau-Roma, Llorenç;
- Brito, Francisco;
- Alnaji, Fadi G.;
- Vignuzzi, Marco;
- García-Nicolás, Obdulio;
- Summerfield, Artur
Publication type:
Article
Prevalence and characteristics of genetic disease in adult kidney stone formers.
Published in:
Nephrology Dialysis Transplantation, 2024, v. 39, n. 9, p. 1426, doi. 10.1093/ndt/gfae074
By:
- Anderegg, Manuel A;
- Olinger, Eric G;
- Bargagli, Matteo;
- Geraghty, Rob;
- Taylor, Lea;
- Nater, Alexander;
- Bruggmann, Rémy;
- Sayer, John A;
- Vogt, Bruno;
- Schaller, André;
- Fuster, Daniel G
Publication type:
Article
An intronic transposon insertion associates with a trans-species color polymorphism in Midas cichlid fishes.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-021-27685-8
By:
- Kratochwil, Claudius F.;
- Kautt, Andreas F.;
- Nater, Alexander;
- Härer, Andreas;
- Liang, Yipeng;
- Henning, Frederico;
- Meyer, Axel
Publication type:
Article
Marked Population Structure and Recent Migration in the Critically Endangered Sumatran Orangutan (Pongo abelii).
Published in:
Journal of Heredity, 2013, v. 104, n. 1, p. 2, doi. 10.1093/jhered/ess065
By:
- Nater, Alexander;
- Arora, Natasha;
- Greminger, Maja P.;
- van Schaik, Carel P.;
- Singleton, Ian;
- Wich, Serge A.;
- Fredriksson, Gabriella;
- Perwitasari-Farajallah, Dyah;
- Pamungkas, Joko;
- Krützen, Michael
Publication type:
Article
The comparative genomic landscape of adaptive radiation in crater lake cichlid fishes.
Published in:
Molecular Ecology, 2021, v. 30, n. 4, p. 955, doi. 10.1111/mec.15774
By:
- Xiong, Peiwen;
- Hulsey, C. Darrin;
- Fruciano, Carmelo;
- Wong, Wai Y.;
- Nater, Alexander;
- Kautt, Andreas F.;
- Simakov, Oleg;
- Pippel, Martin;
- Kuraku, Shigehiro;
- Meyer, Axel;
- Franchini, Paolo
Publication type:
Article
Whole-genome patterns of linkage disequilibrium across flycatcher populations clarify the causes and consequences of fine-scale recombination rate variation in birds.
Published in:
Molecular Ecology, 2017, v. 26, n. 16, p. 4158, doi. 10.1111/mec.14197
By:
- Kawakami, Takeshi;
- Mugal, Carina F.;
- Suh, Alexander;
- Nater, Alexander;
- Burri, Reto;
- Smeds, Linnéa;
- Ellegren, Hans
Publication type:
Article
Divergence in gene expression within and between two closely related flycatcher species.
Published in:
Molecular Ecology, 2016, v. 25, n. 9, p. 2015, doi. 10.1111/mec.13596
By:
- Uebbing, Severin;
- Künstner, Axel;
- Mäkinen, Hannu;
- Backström, Niclas;
- Bolivar, Paulina;
- Burri, Reto;
- Dutoit, Ludovic;
- Mugal, Carina F.;
- Nater, Alexander;
- Aken, Bronwen;
- Flicek, Paul;
- Martin, Fergal J.;
- Searle, Stephen M. J.;
- Ellegren, Hans
Publication type:
Article
Reconstructing the demographic history of orang-utans using Approximate Bayesian Computation.
Published in:
Molecular Ecology, 2015, v. 24, n. 2, p. 310, doi. 10.1111/mec.13027
By:
- Nater, Alexander;
- Greminger, Maja P.;
- Arora, Natasha;
- Schaik, Carel P.;
- Goossens, Benoit;
- Singleton, Ian;
- Verschoor, Ernst J.;
- Warren, Kristin S.;
- Krützen, Michael
Publication type:
Article
Heavily male-biased long-distance dispersal of orang-utans (genus: Pongo), as revealed by Y-chromosomal and mitochondrial genetic markers.
Published in:
Molecular Ecology, 2012, v. 21, n. 13, p. 3173, doi. 10.1111/j.1365-294X.2012.05539.x
By:
- NIETLISBACH, PIRMIN;
- ARORA, NATASHA;
- NATER, ALEXANDER;
- GOOSSENS, BENOIT;
- Van SCHAIK, CAREL P.;
- KRÜTZEN, MICHAEL
Publication type:
Article
Effective Population Size Dynamics and the Demographic Collapse of Bornean Orang-Utans.
Published in:
PLoS ONE, 2012, v. 7, n. 11, p. 1, doi. 10.1371/journal.pone.0049429
By:
- Sharma, Reeta;
- Arora, Natasha;
- Goossens, Benoit;
- Nater, Alexander;
- Morf, Nadja;
- Salmona, Jordi;
- Bruford, Michael W.;
- Van Schaik, Carel P.;
- Krützen, Michael;
- Chikhi, Lounès
Publication type:
Article
Call Cultures in Orang-Utans?
Published in:
PLoS ONE, 2012, v. 7, n. 5, p. 1, doi. 10.1371/journal.pone.0036180
By:
- Wich, Serge A.;
- Krützen, Michael;
- Lameira, Adriano R.;
- Nater, Alexander;
- Arora, Natasha;
- Bastian, Meredith L.;
- Meulman, Ellen;
- Morrogh-Bernard, Helen C.;
- Atmoko, S. Suci Utami;
- Pamungkas, Joko;
- Perwitasari-Farajallah, Dyah;
- Hardus, Madeleine E.;
- van Noordwijk, Maria;
- van Schaik, Carel P.
Publication type:
Article
Different Sources of Allelic Variation Drove Repeated Color Pattern Divergence in Cichlid Fishes.
Published in:
Molecular Biology & Evolution, 2021, v. 38, n. 2, p. 465, doi. 10.1093/molbev/msaa237
By:
- Urban, Sabine;
- Nater, Alexander;
- Meyer, Axel;
- Kratochwil, Claudius F
Publication type:
Article
Reconstructing the Evolutionary History of Chromosomal Races on Islands: A Genome-Wide Analysis of Natural House Mouse Populations.
Published in:
Molecular Biology & Evolution, 2020, v. 37, n. 10, p. 2825, doi. 10.1093/molbev/msaa118
By:
- Franchini, Paolo;
- Kautt, Andreas F;
- Nater, Alexander;
- Antonini, Gloria;
- Castiglia, Riccardo;
- Meyer, Axel;
- Solano, Emanuela
Publication type:
Article
Biased Inference of Selection Due to GC-Biased Gene Conversion and the Rate of Protein Evolution in Flycatchers When Accounting for It.
Published in:
Molecular Biology & Evolution, 2018, v. 35, n. 10, p. 2475, doi. 10.1093/molbev/msy149
By:
- Bolívar, Paulina;
- Mugal, Carina F;
- Rossi, Matteo;
- Nater, Alexander;
- Wang, Mi;
- Dutoit, Ludovic;
- Ellegren, Hans
Publication type:
Article
Recombination Rate Variation Modulates Gene Sequence Evolution Mainly via GC-Biased Gene Conversion, Not Hill–Robertson Interference, in an Avian System.
Published in:
Molecular Biology & Evolution, 2016, v. 33, n. 1, p. 216, doi. 10.1093/molbev/msv214
By:
- Bolívar, Paulina;
- Mugal, Carina F.;
- Nater, Alexander;
- Ellegren, Hans
Publication type:
Article
Evolutionary analysis of the female-specific avian W chromosome.
Published in:
Nature Communications, 2015, v. 6, n. 6, p. 7330, doi. 10.1038/ncomms8330
By:
- Smeds, Linnéa;
- Warmuth, Vera;
- Bolivar, Paulina;
- Uebbing, Severin;
- Burri, Reto;
- Suh, Alexander;
- Nater, Alexander;
- Bureš, Stanislav;
- Garamszegi, Laszlo Z.;
- Hogner, Silje;
- Moreno, Juan;
- Qvarnström, Anna;
- Ružić, Milan;
- Sæther, Stein-Are;
- Sætre, Glenn-Peter;
- Török, Janos;
- Ellegren, Hans
Publication type:
Article
Sex-Biased Dispersal and Volcanic Activities Shaped Phylogeographic Patterns of Extant Orangutans (genus: Pongo).
Published in:
Molecular Biology & Evolution, 2011, v. 28, n. 8, p. 2275, doi. 10.1093/molbev/msr042
By:
- Nater, Alexander;
- Nietlisbach, Pirmin;
- Arora, Natasha;
- van Schaik, Carel P.;
- van Noordwijk, Maria A.;
- Willems, Erik P.;
- Singleton, Ian;
- Wich, Serge A.;
- Goossens, Benoit;
- Warren, Kristin S.;
- Verschoor, Ernst J.;
- Perwitasari-Farajallah, Dyah;
- Pamungkas, Joko;
- Krützen, Michael
Publication type:
Article
Resolving Evolutionary Relationships in Closely Related Species with Whole-Genome Sequencing Data.
Published in:
Systematic Biology, 2015, v. 64, n. 6, p. 1000, doi. 10.1093/sysbio/syv045
By:
- NATER, ALEXANDER;
- BURRI, RETO;
- KAWAKAMI, TAKESHI;
- SMEDS, LINNÉA;
- ELLEGREN, HANS
Publication type:
Article
How Linked Selection Shapes the Diversity Landscape in Ficedula Flycatchers.
Published in:
Genetics, 2019, v. 212, n. 1, p. 277, doi. 10.1534/genetics.119.301991
By:
- Rettelbach, Agnes;
- Ellegren, Hans;
- Nater, Alexander
Publication type:
Article
Molecular parallelism in the evolution of a master sex‐determining role for the anti‐Mullerian hormone receptor 2 gene (amhr2) in Midas cichlids.
Published in:
Molecular Ecology, 2023, v. 32, n. 6, p. 1398, doi. 10.1111/mec.16466
By:
- Nacif, Camila L.;
- Kratochwil, Claudius F.;
- Kautt, Andreas F.;
- Nater, Alexander;
- Machado‐Schiaffino, Gonzalo;
- Meyer, Axel;
- Henning, Frederico
Publication type:
Article
Genomes reveal marked differences in the adaptive evolution between orangutan species.
Published in:
Genome Biology, 2018, v. 19, n. 1, p. N.PAG, doi. 10.1186/s13059-018-1562-6
By:
- Mattle-Greminger, Maja P.;
- Bilgin Sonay, Tugce;
- Nater, Alexander;
- Pybus, Marc;
- Desai, Tariq;
- de Valles, Guillem;
- Casals, Ferran;
- Scally, Aylwyn;
- Bertranpetit, Jaume;
- Marques-Bonet, Tomas;
- van Schaik, Carel P.;
- Anisimova, Maria;
- Krützen, Michael
Publication type:
Article
Genomic distribution and estimation of nucleotide diversity in natural populations: perspectives from the collared flycatcher ( Ficedula albicollis) genome.
Published in:
Molecular Ecology Resources, 2017, v. 17, n. 4, p. 586, doi. 10.1111/1755-0998.12602
By:
- Dutoit, Ludovic;
- Burri, Reto;
- Nater, Alexander;
- Mugal, Carina F.;
- Ellegren, Hans
Publication type:
Article
Development of polymorphic microsatellite markers for the dung fly ( Sepsis cynipsea).
Published in:
Molecular Ecology Resources, 2009, v. 9, n. 6, p. 1554, doi. 10.1111/j.1755-0998.2009.02736.x
By:
- GREMINGER, MAJA P.;
- SCHÄFER, MARTIN A.;
- NATER, ALEXANDER;
- BLANCKENHORN, WOLF U.;
- KRÜTZEN, MICHAEL
Publication type:
Article
New polymorphic tetranucleotide microsatellites improve scoring accuracy in the bottlenose dolphin Tursiops aduncus.
Published in:
Molecular Ecology Resources, 2009, v. 9, n. 2, p. 531, doi. 10.1111/j.1755-0998.2008.02246.x
By:
- NATER, ALEXANDER;
- KOPPS, ANNA M.;
- KRÜTZEN, MICHAEL
Publication type:
Article
Development of polymorphic microsatellite markers for the livebearing fish Poecilia parae.
Published in:
Molecular Ecology Resources, 2008, v. 8, n. 4, p. 857, doi. 10.1111/j.1755-0998.2008.02090.x
By:
- NATER, ALEXANDER;
- KRÜTZEN, MICHAEL;
- LINDHOLM, ANNA K.
Publication type:
Article
Generation of SNP datasets for orangutan population genomics using improved reduced-representation sequencing and direct comparisons of SNP calling algorithms.
Published in:
BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-16
By:
- Greminger, Maja P.;
- Stölting, Kai N.;
- Nater, Alexander;
- Goossens, Benoit;
- Arora, Natasha;
- Bruggmann, Rémy;
- Patrignani, Andrea;
- Nussberger, Beatrice;
- Sharma, Reeta;
- Kraus, Robert H.;
- Ambu, Laurentius N.;
- Singleton, Ian;
- Chikhi, Lounes;
- van Schaik, Carel P.;
- Krützen, Michael
Publication type:
Article
Genome sequences reveal global dispersal routes and suggest convergent genetic adaptations in seahorse evolution.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-21379-x
By:
- Li, Chunyan;
- Olave, Melisa;
- Hou, Yali;
- Qin, Geng;
- Schneider, Ralf F.;
- Gao, Zexia;
- Tu, Xiaolong;
- Wang, Xin;
- Qi, Furong;
- Nater, Alexander;
- Kautt, Andreas F.;
- Wan, Shiming;
- Zhang, Yanhong;
- Liu, Yali;
- Zhang, Huixian;
- Zhang, Bo;
- Zhang, Hao;
- Qu, Meng;
- Liu, Shuaishuai;
- Chen, Zeyu
Publication type:
Article

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