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Protein kinase CK2 inactivates PRH/Hhex using multiple mechanisms to de-repress VEGF-signalling genes and promote cell survival.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9008, doi. 10.1093/nar/gks687
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- Article
Efficient deamination of 5-methylcytosines in DNA by human APOBEC3A, but not by AID or APOBEC3G.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9206, doi. 10.1093/nar/gks685
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- Article
The CR3 motif of Rrp44p is important for interaction with the core exosome and exosome function.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9298, doi. 10.1093/nar/gks693
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A novel ab initio identification system of transcriptional regulation motifs in genome DNA sequences based on direct comparison scheme of signal/noise distributions.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 8835, doi. 10.1093/nar/gks642
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Subscriptions.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. iii, doi. 10.1093/nar/gks124
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- Article
Sequence signatures of direct complementarity between mRNAs and cognate proteins on multiple levels.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 8874, doi. 10.1093/nar/gks679
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Monitoring bypass of single replication-blocking lesions by damage avoidance in the Escherichia coli chromosome.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9036, doi. 10.1093/nar/gks675
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Computational identification of new structured cis-regulatory elements in the 3′-untranslated region of human protein coding genes.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 8862, doi. 10.1093/nar/gks684
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- Article
The epigenetic control of E-box and Myc-dependent chromatin modifications regulate the licensing of lamin B2 origin during cell cycle.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9021, doi. 10.1093/nar/gks617
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Epigenetic control of alternative mRNA processing at the imprinted Herc3/Nap1l5 locus.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 8917, doi. 10.1093/nar/gks654
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A common feature from different subunits of a homomeric AAA+ protein contacts three spatially distinct transcription elements.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9139, doi. 10.1093/nar/gks661
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- Article
Phosphorothioate DNA as an antioxidant in bacteria.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9115, doi. 10.1093/nar/gks650
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The core regulation module of stress-responsive regulatory networks in yeast.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 8793, doi. 10.1093/nar/gks649
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Residues of E. coli topoisomerase I conserved for interaction with a specific cytosine base to facilitate DNA cleavage.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9233, doi. 10.1093/nar/gks688
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SVM2: an improved paired-end-based tool for the detection of small genomic structural variations using high-throughput single-genome resequencing data.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. e145, doi. 10.1093/nar/gks606
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Spi-1/PU.1 activates transcription through clustered DNA occupancy in erythroleukemia.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 8927, doi. 10.1093/nar/gks659
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Structural insights into recognition and repair of UV-DNA damage by Spore Photoproduct Lyase, a radical SAM enzyme.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9308, doi. 10.1093/nar/gks603
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Identification of new microRNA-regulated genes by conserved targeting in plant species.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 8893, doi. 10.1093/nar/gks625
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The solution structure of double helical arabino nucleic acids (ANA and 2′F-ANA): effect of arabinoses in duplex-hairpin interconversion.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9329
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Deep sequencing of RNA from immune cell-derived vesicles uncovers the selective incorporation of small non-coding RNA biotypes with potential regulatory functions.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9272, doi. 10.1093/nar/gks658
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PKC phosphorylates HEXIM1 and regulates P-TEFb activity.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9160, doi. 10.1093/nar/gks682
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Functional screening for miRNAs targeting Smad4 identified miR-199a as a negative regulator of TGF-β signalling pathway.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9286, doi. 10.1093/nar/gks667
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A fractal model for nuclear organization: current evidence and biological implications.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 8783, doi. 10.1093/nar/gks586
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Nucleic Acids Research - Editorial Board.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. ii, doi. 10.1093/nar/gks080
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- Article
Customized optimization of metabolic pathways by combinatorial transcriptional engineering.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. e142, doi. 10.1093/nar/gks549
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Structural basis for translation termination by archaeal RF1 and GTP-bound EF1α complex.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9319, doi. 10.1093/nar/gks660
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One Hand Clapping: detection of condition-specific transcription factor interactions from genome-wide gene activity data.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 8883
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The co-regulation mechanism of transcription factors in the human gene regulatory network.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 8849, doi. 10.1093/nar/gks664
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Sequencing of the smallest Apicomplexan genome from the human pathogen Babesia microti†.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9102, doi. 10.1093/nar/gks700
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Trans-kingdom rescue of Gln-tRNAGln synthesis in yeast cytoplasm and mitochondria.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9171, doi. 10.1093/nar/gks689
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Probing hybridization parameters from microarray experiments: nearest-neighbor model and beyond.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. e138, doi. 10.1093/nar/gks475
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IBM1, a JmjC domain-containing histone demethylase, is involved in the regulation of RNA-directed DNA methylation through the epigenetic control of RDR2 and DCL3 expression in Arabidopsis.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 8905, doi. 10.1093/nar/gks647
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MicroRNAs are exported from malignant cells in customized particles.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9125, doi. 10.1093/nar/gks656
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‘Shotgun DNA synthesis’ for the high-throughput construction of large DNA molecules.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. e140, doi. 10.1093/nar/gks546
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Mammalian NUMT insertion is non-random.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9073, doi. 10.1093/nar/gks424
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Regulatory consequences of gene translocation in bacteria.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 8979, doi. 10.1093/nar/gks694
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FunciSNP: an R/bioconductor tool integrating functional non-coding data sets with genetic association studies to identify candidate regulatory SNPs.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. e139, doi. 10.1093/nar/gks542
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Expression of endogenous retroviruses is negatively regulated by the pluripotency marker Rex1/Zfp42.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 8993, doi. 10.1093/nar/gks686
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NF45 dimerizes with NF90, Zfr and SPNR via a conserved domain that has a nucleotidyltransferase fold.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9356, doi. 10.1093/nar/gks696
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Protein L5 is crucial for in vivo assembly of the bacterial 50S ribosomal subunit central protuberance.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9153, doi. 10.1093/nar/gks676
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Proximity of H2A.Z containing nucleosome to the transcription start site influences gene expression levels in the mammalian liver and brain.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 8965, doi. 10.1093/nar/gks665
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Higher order oligomerization is required for H-NS family member MvaT to form gene-silencing nucleoprotein filament.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 8942, doi. 10.1093/nar/gks669
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Computational analysis of target hub gene repression regulated by multiple and cooperative miRNAs.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 8818, doi. 10.1093/nar/gks657
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Kinetics of endogenous mouse FEN1 in base excision repair.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9044, doi. 10.1093/nar/gks673
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Splicing of internal large exons is defined by novel cis-acting sequence elements.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9244, doi. 10.1093/nar/gks652
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Fidelity of capture-enrichment for mtDNA genome sequencing: influence of NUMTs.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. e137, doi. 10.1093/nar/gks499
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Detection of DNA–protein crosslinks (DPCs) by novel direct fluorescence labeling methods: distinct stabilities of aldehyde and radiation-induced DPCs.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. e143, doi. 10.1093/nar/gks601
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Crucial role of dynamic linker histone binding and divalent ions for DNA accessibility and gene regulation revealed by mesoscale modeling of oligonucleosomes.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 8803, doi. 10.1093/nar/gks600
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A NAC transcription factor and SNI1 cooperatively suppress basal pathogen resistance in Arabidopsis thaliana.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. 9182, doi. 10.1093/nar/gks683
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Quantification of RNA integrity and its use for measurement of transcript number.
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- Nucleic Acids Research, 2012, v. 40, n. 18, p. e144, doi. 10.1093/nar/gks588
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