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NB-LRR-encoding genes conferring susceptibility to organophosphate pesticides in sorghum.
Published in:
Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-98908-7
By:
- Jing, Zihuan;
- Wacera W., Fiona;
- Takami, Tsuneaki;
- Takanashi, Hideki;
- Fukada, Fumi;
- Kawano, Yoji;
- Kajiya-Kanegae, Hiromi;
- Iwata, Hiroyoshi;
- Tsutsumi, Nobuhiro;
- Sakamoto, Wataru
Publication type:
Article
Predicting Rice Heading Date Using an Integrated Approach Combining a Machine Learning Method and a Crop Growth Model.
Published in:
Frontiers in Genetics, 2020, v. 11, p. N.PAG, doi. 10.3389/fgene.2020.599510
By:
- Chen, Tai-Shen;
- Aoike, Toru;
- Yamasaki, Masanori;
- Kajiya-Kanegae, Hiromi;
- Iwata, Hiroyoshi
Publication type:
Article
CyanoBase and RhizoBase: databases of manually curated annotations for cyanobacterial and rhizobial genomes.
Published in:
Nucleic Acids Research, 2014, v. 42, n. D1, p. D666, doi. 10.1093/nar/gkt1145
By:
- Fujisawa, Takatomo;
- Okamoto, Shinobu;
- Katayama, Toshiaki;
- Nakao, Mitsuteru;
- Yoshimura, Hidehisa;
- Kajiya-Kanegae, Hiromi;
- Yamamoto, Sumiko;
- Yano, Chiyoko;
- Yanaka, Yuka;
- Maita, Hiroko;
- Kaneko, Takakazu;
- Tabata, Satoshi;
- Nakamura, Yasukazu
Publication type:
Article
Deletion in a gene associated with grain size increased yields during rice domestication.
Published in:
Nature Genetics, 2008, v. 40, n. 8, p. 1023, doi. 10.1038/ng.169
By:
- Shomura, Ayahiko;
- Izawa, Takeshi;
- Ebana, Kaworu;
- Ebitani, Takeshi;
- Kanegae, Hiromi;
- Konishi2, Saeko;
- Yano, Masahiro
Publication type:
Article
A simulation-based breeding design that uses whole-genome prediction in tomato.
Published in:
Scientific Reports, 2016, p. 19454, doi. 10.1038/srep19454
By:
- Yamamoto, Eiji;
- Matsunaga, Hiroshi;
- Onogi, Akio;
- Kajiya-Kanegae, Hiromi;
- Minamikawa, Mai;
- Suzuki, Akinori;
- Shirasawa, Kenta;
- Hirakawa, Hideki;
- Nunome, Tsukasa;
- Yamaguchi, Hirotaka;
- Miyatake, Koji;
- Ohyama, Akio;
- Iwata, Hiroyoshi;
- Fukuoka, Hiroyuki
Publication type:
Article
Time‐series multispectral imaging in soybean for improving biomass and genomic prediction accuracy.
Published in:
Plant Genome, 2022, v. 15, n. 4, p. 1, doi. 10.1002/tpg2.20244
By:
- Sakurai, Kengo;
- Toda, Yusuke;
- Kajiya‐Kanegae, Hiromi;
- Ohmori, Yoshihiro;
- Yamasaki, Yuji;
- Takahashi, Hirokazu;
- Takanashi, Hideki;
- Tsuda, Mai;
- Tsujimoto, Hisashi;
- Kaga, Akito;
- Nakazono, Mikio;
- Fujiwara, Toru;
- Iwata, Hiroyoshi
Publication type:
Article
Genomic prediction modeling of soybean biomass using UAV‐based remote sensing and longitudinal model parameters.
Published in:
Plant Genome, 2021, v. 14, n. 3, p. 1, doi. 10.1002/tpg2.20157
By:
- Toda, Yusuke;
- Kaga, Akito;
- Kajiya‐Kanegae, Hiromi;
- Hattori, Tomohiro;
- Yamaoka, Shuhei;
- Okamoto, Masanori;
- Tsujimoto, Hisashi;
- Iwata, Hiroyoshi
Publication type:
Article
Choosing the optimal population for a genome‐wide association study: A simulation of whole‐genome sequences from rice.
Published in:
Plant Genome, 2020, v. 13, n. 1, p. 1, doi. 10.1002/tpg2.20005
By:
- Hamazaki, Kosuke;
- Kajiya‐Kanegae, Hiromi;
- Yamasaki, Masanori;
- Ebana, Kaworu;
- Yabe, Shiori;
- Nakagawa, Hiroshi;
- Iwata, Hiroyoshi
Publication type:
Article
Collection, preservation and distribution of Oryza genetic resources by the National Bioresource Project RICE (NBRP-RICE).
Published in:
Breeding Science, 2021, v. 71, n. 3, p. 291, doi. 10.1270/jsbbs.21005
By:
- Yutaka Sato;
- Katsutoshi Tsuda;
- Yoshiyuki Yamagata;
- Hiroaki Matsusaka;
- Hiromi Kajiya-Kanegae;
- Yuri Yoshida;
- Ayumi Agata;
- Kim Nhung Ta;
- Sae Shimizu-Sato;
- Toshiya Suzuki;
- Misuzu Nosaka-Takahashi;
- Takahiko Kubo;
- Shoko Kawamoto;
- Ken-Ichi Nonomura;
- Hideshi Yasui;
- Toshihiro Kumamaru
Publication type:
Article
Spatial kernel models capturing field heterogeneity for accurate estimation of genetic potential.
Published in:
Breeding Science, 2021, v. 71, n. 4, p. 444, doi. 10.1270/jsbbs.20060
By:
- Motoyuki Ishimori;
- Hideki Takanashi;
- Masaru Fujimoto;
- Hiromi Kajiya-Kanegae;
- Junichi Yoneda;
- Tsuyoshi Tokunaga;
- Nobuhiro Tsutsumi;
- Hiroyoshi Iwata
Publication type:
Article
Impacts of dominance effects on genomic prediction of sorghum hybrid performance.
Published in:
Breeding Science, 2020, v. 70, n. 5, p. 605, doi. 10.1270/jsbbs.20042
By:
- Motoyuki Ishimori;
- Tomohiro Hattori;
- Kiyoshi Yamazaki;
- Hideki Takanashi;
- Masaru Fujimoto;
- Hiromi Kajiya-Kanegae;
- Junichi Yoneda;
- Tsuyoshi Tokunaga;
- Toru Fujiwara;
- Nobuhiro Tsutsumi;
- Hiroyoshi Iwata
Publication type:
Article
Effect of salt tolerance on biomass production in a large population of sorghum accessions.
Published in:
Breeding Science, 2020, v. 70, n. 2, p. 167, doi. 10.1270/jsbbs.19009
By:
- Kiyoshi Yamazaki;
- Motoyuki Ishimori;
- Hiromi Kajiya-Kanegae;
- Hideki Takanashi;
- Masaru Fujimoto;
- Jun-ichi Yoneda;
- Kentaro Yano;
- Taichi Koshiba;
- Ryokei Tanaka;
- Hiroyoshi Iwata;
- Tsuyoshi Tokunaga;
- Nobuhiro Tsutsumi;
- Toru Fujiwara
Publication type:
Article
Genomics-assisted breeding in fruit trees.
Published in:
Breeding Science, 2016, v. 66, n. 1, p. 100, doi. 10.1270/jsbbs.66.100
By:
- Hiroyoshi Iwata;
- Minamikawa, Mai F.;
- Hiromi Kajiya-Kanegae;
- Motoyuki Ishimori;
- Takeshi Hayashi
Publication type:
Article
DOMINANT AWN INHIBITOR Encodes the ALOG Protein Originating from Gene Duplication and Inhibits AWN Elongation by Suppressing Cell Proliferation and Elongation in Sorghum.
Published in:
Plant & Cell Physiology, 2022, v. 63, n. 7, p. 901, doi. 10.1093/pcp/pcac057
By:
- Takanashi, Hideki;
- Kajiya-Kanegae, Hiromi;
- Nishimura, Asuka;
- Yamada, Junko;
- Ishimori, Motoyuki;
- Kobayashi, Masaaki;
- Yano, Kentaro;
- Iwata, Hiroyoshi;
- Tsutsumi, Nobuhiro;
- Sakamoto, Wataru
Publication type:
Article
Sorghum Ionomics Reveals the Functional SbHMA3a Allele that Limits Excess Cadmium Accumulation in Grains.
Published in:
Plant & Cell Physiology, 2022, v. 63, n. 5, p. 713, doi. 10.1093/pcp/pcac035
By:
- Wahinya, Fiona Wacera;
- Yamazaki, Kiyoshi;
- Jing, Zihuan;
- Takami, Tsuneaki;
- Kamiya, Takehiro;
- Kajiya-Kanegae, Hiromi;
- Takanashi, Hideki;
- Iwata, Hiroyoshi;
- Tsutsumi, Nobuhiro;
- Fujiwara, Toru;
- Sakamoto, Wataru
Publication type:
Article
Genomic Prediction of Green Fraction Dynamics in Soybean Using Unmanned Aerial Vehicles Observations.
Published in:
Frontiers in Plant Science, 2022, v. 13, p. 1, doi. 10.3389/fpls.2022.828864
By:
- Toda, Yusuke;
- Sasaki, Goshi;
- Ohmori, Yoshihiro;
- Yamasaki, Yuji;
- Takahashi, Hirokazu;
- Takanashi, Hideki;
- Tsuda, Mai;
- Kajiya-Kanegae, Hiromi;
- Lopez-Lozano, Raul;
- Tsujimoto, Hisashi;
- Kaga, Akito;
- Nakazono, Mikio;
- Fujiwara, Toru;
- Baret, Frederic;
- Iwata, Hiroyoshi
Publication type:
Article
Dissecting the Genetic Architecture of Biofuel-Related Traits in a Sorghum Breeding Population.
Published in:
G3: Genes | Genomes | Genetics, 2020, v. 10, n. 12, p. 4565, doi. 10.1534/g3.120.401582
By:
- Motoyuki Ishimori;
- Hideki Takanashi;
- Kosuke Hamazaki;
- Yamato Atagi;
- Hiromi Kajiya-Kanegae;
- Masaru Fujimoto;
- Junichi Yoneda;
- Tsuyoshi Tokunaga;
- Nobuhiro Tsutsumi;
- Hiroyoshi Iwata
Publication type:
Article
Predicting biomass of rice with intermediate traits: Modeling method combining crop growth models and genomic prediction models.
Published in:
PLoS ONE, 2020, v. 15, n. 6, p. 1, doi. 10.1371/journal.pone.0233951
By:
- Toda, Yusuke;
- Wakatsuki, Hitomi;
- Aoike, Toru;
- Kajiya-Kanegae, Hiromi;
- Yamasaki, Masanori;
- Yoshioka, Takuma;
- Ebana, Kaworu;
- Hayashi, Takeshi;
- Nakagawa, Hiroshi;
- Hasegawa, Toshihiro;
- Iwata, Hiroyoshi
Publication type:
Article
Comparison of shape quantification methods for genomic prediction, and genome-wide association study of sorghum seed morphology.
Published in:
PLoS ONE, 2019, v. 14, n. 11, p. 1, doi. 10.1371/journal.pone.0224695
By:
- Sakamoto, Lisa;
- Kajiya-Kanegae, Hiromi;
- Noshita, Koji;
- Takanashi, Hideki;
- Kobayashi, Masaaki;
- Kudo, Toru;
- Yano, Kentaro;
- Tokunaga, Tsuyoshi;
- Tsutsumi, Nobuhiro;
- Iwata, Hiroyoshi
Publication type:
Article
Correction: From gene banks to farmer’s fields: using genomic selection to identify donors for a breeding program in rice to close the yield gap on smallholder farms.
Published in:
2024
By:
- Tanaka, Ryokei;
- Lui-King, James;
- Mandaharisoa, Sarah Tojo;
- Rakotondramanana, Mbolatantely;
- Ranaivo, Harisoa Nicole;
- Pariasca-Tanaka, Juan;
- Kanegae, Hiromi Kajiya;
- Iwata, Hiroyoshi;
- Wissuwa, Matthias
Publication type:
Correction Notice
Reaction norm for genomic prediction of plant growth: modeling drought stress response in soybean.
Published in:
Theoretical & Applied Genetics, 2024, v. 137, n. 4, p. 1, doi. 10.1007/s00122-024-04565-5
By:
- Toda, Yusuke;
- Sasaki, Goshi;
- Ohmori, Yoshihiro;
- Yamasaki, Yuji;
- Takahashi, Hirokazu;
- Takanashi, Hideki;
- Tsuda, Mai;
- Kajiya-Kanegae, Hiromi;
- Tsujimoto, Hisashi;
- Kaga, Akito;
- Hirai, Masami;
- Nakazono, Mikio;
- Fujiwara, Toru;
- Iwata, Hiroyoshi
Publication type:
Article
From gene banks to farmer's fields: using genomic selection to identify donors for a breeding program in rice to close the yield gap on smallholder farms.
Published in:
Theoretical & Applied Genetics, 2021, v. 134, n. 10, p. 3397, doi. 10.1007/s00122-021-03909-9
By:
- Tanaka, Ryokei;
- Mandaharisoa, Sarah Tojo;
- Rakotondramanana, Mbolatantely;
- Ranaivo, Harisoa Nicole;
- Pariasca-Tanaka, Juan;
- Kajiya-Kanegae, Hiromi;
- Iwata, Hiroyoshi;
- Wissuwa, Matthias
Publication type:
Article
RAD-seq-Based High-Density Linkage Map Construction and QTL Mapping of Biomass-Related Traits in Sorghum using the Japanese Landrace Takakibi NOG.
Published in:
Plant & Cell Physiology, 2020, v. 61, n. 7, p. 1262, doi. 10.1093/pcp/pcaa056
By:
- Kajiya-Kanegae, Hiromi;
- Takanashi, Hideki;
- Fujimoto, Masaru;
- Ishimori, Motoyuki;
- Ohnishi, Norikazu;
- W., Fiona Wacera;
- Omollo, Everlyne A;
- Kobayashi, Masaaki;
- Yano, Kentaro;
- Nakano, Michiharu;
- Kozuka, Toshiaki;
- Kusaba, Makoto;
- Iwata, Hiroyoshi;
- Tsutsumi, Nobuhiro;
- Sakamoto, Wataru
Publication type:
Article
Plant Omics Data Center: An Integrated Web Repository for Interspecies Gene Expression Networks with NLP-Based Curation.
Published in:
Plant & Cell Physiology, 2015, v. 56, n. 1, p. e9, doi. 10.1093/pcp/pcu188
By:
- Ohyanagi, Hajime;
- Takano, Tomoyuki;
- Terashima, Shin;
- Kobayashi, Masaaki;
- Kanno, Maasa;
- Morimoto, Kyoko;
- Kanegae, Hiromi;
- Sasaki, Yohei;
- Saito, Misa;
- Asano, Satomi;
- Ozaki, Soichi;
- Kudo, Toru;
- Yokoyama, Koji;
- Aya, Koichiro;
- Suwabe, Keita;
- Suzuki, Go;
- Aoki, Koh;
- Kubo, Yasutaka;
- Watanabe, Masao;
- Matsuoka, Makoto
Publication type:
Article
Rice NPH1 Homologues, OsNPH1a and OsNPH1b, Are Differently Photoregulated.
Published in:
Plant & Cell Physiology, 2000, v. 41, n. 4, p. 415, doi. 10.1093/pcp/41.4.415
By:
- Kanegae, Hiromi;
- Tahir, M.;
- Savazzini, Federica;
- Yamamoto, Kimiko;
- Yano, Masahiro;
- Sasaki, Takuji;
- Kanegae, Takeshi;
- Wada, Masamitsu;
- Takano, Makoto
Publication type:
Article
High-Throughput Phenotyping of Sorghum Plant Height Using an Unmanned Aerial Vehicle and Its Application to Genomic Prediction Modeling.
Published in:
Frontiers in Plant Science, 2017, v. 8, p. 1, doi. 10.3389/fpls.2017.00421
By:
- Kakeru Watanabe;
- Wei Guo;
- Keigo Arai;
- Hideki Takanashi;
- Hiromi Kajiya-Kanegae;
- Masaaki Kobayashi;
- Kentaro Yano;
- Tsuyoshi Tokunaga;
- Toru Fujiwara;
- Nobuhiro Tsutsumi;
- Hiroyoshi Iwata
Publication type:
Article
OryzaGenome2.1: Database of Diverse Genotypes in Wild Oryza Species.
Published in:
Rice (19398425), 2021, v. 14, n. 1, p. 1, doi. 10.1186/s12284-021-00468-x
By:
- Kajiya-Kanegae, Hiromi;
- Ohyanagi, Hajime;
- Ebata, Toshinobu;
- Tanizawa, Yasuhiro;
- Onogi, Akio;
- Sawada, Yuji;
- Hirai, Masami Yokota;
- Wang, Zi-Xuan;
- Han, Bin;
- Toyoda, Atsushi;
- Fujiyama, Asao;
- Iwata, Hiroyoshi;
- Tsuda, Katsutoshi;
- Suzuki, Toshiya;
- Nosaka-Takahashi, Misuzu;
- Nonomura, Ken-ichi;
- Nakamura, Yasukazu;
- Kawamoto, Shoko;
- Kurata, Nori;
- Sato, Yutaka
Publication type:
Article
Analysis of expressed sequence tags in prothallia of Adiantum capillus-veneris.
Published in:
Journal of Plant Research, 2005, v. 118, n. 3, p. 223, doi. 10.1007/s10265-005-0209-3
By:
- Yamauchi, Daisuke;
- Sutoh, Keita;
- Kanegae, Hiromi;
- Horiguchi, Tatsuya;
- Matsuoka, Ken;
- Fukuda, Hiroo;
- Wada, Masamitsu
Publication type:
Article
Genetic dissection of QTLs associated with spikelet-related traits and grain size in sorghum.
Published in:
Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-88917-x
By:
- Takanashi, Hideki;
- Shichijo, Mitsutoshi;
- Sakamoto, Lisa;
- Kajiya-Kanegae, Hiromi;
- Iwata, Hiroyoshi;
- Sakamoto, Wataru;
- Tsutsumi, Nobuhiro
Publication type:
Article
Coupling day length data and genomic prediction tools for predicting time-related traits under complex scenarios.
Published in:
Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-70267-9
By:
- Jarquin, Diego;
- Kajiya-Kanegae, Hiromi;
- Taishen, Chen;
- Yabe, Shiori;
- Persa, Reyna;
- Yu, Jianming;
- Nakagawa, Hiroshi;
- Yamasaki, Masanori;
- Iwata, Hiroyoshi
Publication type:
Article
Genetic mapping of local adaptation along the altitudinal gradient in Abies sachalinensis.
Published in:
Tree Genetics & Genomes, 2017, v. 13, n. 5, p. 1, doi. 10.1007/s11295-017-1191-3
By:
- Goto, Susumu;
- Kajiya-Kanegae, Hiromi;
- Ishizuka, Wataru;
- Kitamura, Keiko;
- Ueno, Saneyoshi;
- Hisamoto, Yoko;
- Kudoh, Hiroshi;
- Yasugi, Masaki;
- Nagano, Atsushi;
- Iwata, Hiroyoshi
Publication type:
Article
Development of SSR Databases Available for Both NGS and Capillary Electrophoresis in Apple, Pear and Tea.
Published in:
Plants (2223-7747), 2021, v. 10, n. 12, p. 2796, doi. 10.3390/plants10122796
By:
- Nishio, Sogo;
- Kunihisa, Miyuki;
- Taniguchi, Fumiya;
- Kajiya-Kanegae, Hiromi;
- Moriya, Shigeki;
- Takeuchi, Yukie;
- Sawamura, Yutaka
Publication type:
Article
Genome-wide association study and genomic prediction using parental and breeding populations of Japanese pear (Pyrus pyrifolia Nakai)
Published in:
Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-30154-w
By:
- Minamikawa, Mai F.;
- Takada, Norio;
- Terakami, Shingo;
- Saito, Toshihiro;
- Onogi, Akio;
- Kajiya-Kanegae, Hiromi;
- Hayashi, Takeshi;
- Yamamoto, Toshiya;
- Iwata, Hiroyoshi
Publication type:
Article
Genetic Dissection of Growth and Eco-Physiological Traits Associated with Altitudinal Adaptation in Sakhalin Fir (Abies sachalinensis) Based on QTL Mapping.
Published in:
Genes, 2021, v. 12, n. 8, p. 1110, doi. 10.3390/genes12081110
By:
- Goto, Susumu;
- Mori, Hideki;
- Uchiyama, Kentaro;
- Ishizuka, Wataru;
- Taneda, Haruhiko;
- Kono, Masaru;
- Kajiya-Kanegae, Hiromi;
- Iwata, Hiroyoshi
Publication type:
Article
Description of grain weight distribution leading to genomic selection for grain-filling characteristics in rice.
Published in:
PLoS ONE, 2018, v. 13, n. 11, p. 1, doi. 10.1371/journal.pone.0207627
By:
- Yabe, Shiori;
- Yoshida, Hiroe;
- Kajiya-Kanegae, Hiromi;
- Yamasaki, Masanori;
- Iwata, Hiroyoshi;
- Ebana, Kaworu;
- Hayashi, Takeshi;
- Nakagawa, Hiroshi
Publication type:
Article
Whole-genome sequence diversity and association analysis of 198 soybean accessions in mini-core collections.
Published in:
DNA Research, 2021, v. 28, n. 1, p. 1, doi. 10.1093/dnares/dsaa032
By:
- Kajiya-Kanegae, Hiromi;
- Nagasaki, Hideki;
- Kaga, Akito;
- Hirano, Ko;
- Ogiso-Tanaka, Eri;
- Matsuoka, Makoto;
- Ishimori, Motoyuki;
- Ishimoto, Masao;
- Hashiguchi, Masatsugu;
- Tanaka, Hidenori;
- Akashi, Ryo;
- Isobe, Sachiko;
- Iwata, Hiroyoshi
Publication type:
Article
Heap: a highly sensitive and accurate SNP detection tool for low-coverage high-throughput sequencing data.
Published in:
DNA Research, 2017, v. 24, n. 4, p. 397, doi. 10.1093/dnares/dsx012
By:
- Masaaki Kobayashi;
- Hajime Ohyanagi;
- Hideki Takanashi;
- Satomi Asano;
- Toru Kudo;
- Hiromi Kajiya-Kanegae;
- Nagano, Atsushi J.;
- Hitoshi Tainaka;
- Tsuyoshi Tokunaga;
- Takashi Sazuka;
- Hiroyoshi Iwata;
- Nobuhiro Tsutsumi;
- Kentaro Yano
Publication type:
Article

Found: 37