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Pairing of T-cell receptor chains via emulsion PCR.
Published in:
European Journal of Immunology, 2013, v. 43, n. 9, p. 2507, doi. 10.1002/eji.201343453
By:
- Turchaninova, Maria A.;
- Britanova, Olga V.;
- Bolotin, Dmitriy A.;
- Shugay, Mikhail;
- Putintseva, Ekaterina V.;
- Staroverov, Dmitriy B.;
- Sharonov, George;
- Shcherbo, Dmitriy;
- Zvyagin, Ivan V.;
- Mamedov, Ilgar Z.;
- Linnemann, Carsten;
- Schumacher, Ton N.;
- Chudakov, Dmitriy M.
Publication type:
Article
Next generation sequencing for TCR repertoire profiling: Platform-specific features and correction algorithms.
Published in:
European Journal of Immunology, 2012, v. 42, n. 11, p. 3073, doi. 10.1002/eji.201242517
By:
- Bolotin, Dmitry A.;
- Mamedov, Ilgar Z.;
- Britanova, Olga V.;
- Zvyagin, Ivan V.;
- Shagin, Dmitriy;
- Ustyugova, Svetlana V.;
- Turchaninova, Maria A.;
- Lukyanov, Sergey;
- Lebedev, Yury B.;
- Chudakov, Dmitriy M.
Publication type:
Article
Quantitative tracking of T cell clones after haematopoietic stem cell transplantation.
Published in:
EMBO Molecular Medicine, 2011, v. 3, n. 4, p. 201, doi. 10.1002/emmm.201100129
By:
- Mamedov, Ilgar Z.;
- Britanova, Olga V.;
- Bolotin, Dmitriy A.;
- Chkalina, Anna V.;
- Staroverov, Dmitriy B.;
- Zvyagin, Ivan V.;
- Kotlobay, Alexey A.;
- Turchaninova, Maria A.;
- Fedorenko, Denis A.;
- Novik, Andrew A.;
- Sharonov, George V.;
- Lukyanov, Sergey;
- Chudakov, Dmitriy M.;
- Lebedev, Yuri B.
Publication type:
Article
Mutated Flt3Lg Provides Reduced Flt3 Recycling Compared to Wild-Type Flt3Lg and Retains the Specificity of Flt3Lg-Based CAR T-Cell Targeting in AML Models.
Published in:
International Journal of Molecular Sciences, 2023, v. 24, n. 8, p. 7626, doi. 10.3390/ijms24087626
By:
- Maiorova, Varvara;
- Mollaev, Murad D.;
- Vikhreva, Polina;
- Chudakov, Dmitriy M.;
- Kibardin, Alexey;
- Maschan, Michael A.;
- Larin, Sergey
Publication type:
Article
Detecting T cell receptors involved in immune responses from single repertoire snapshots.
Published in:
PLoS Biology, 2019, v. 17, n. 6, p. 1, doi. 10.1371/journal.pbio.3000314
By:
- Pogorelyy, Mikhail V.;
- Minervina, Anastasia A.;
- Shugay, Mikhail;
- Chudakov, Dmitriy M.;
- Lebedev, Yuri B.;
- Mora, Thierry;
- Walczak, Aleksandra M.
Publication type:
Article
Structural basis for the fast maturation of Arthropoda green fluorescent protein.
Published in:
EMBO Reports, 2006, v. 7, n. 10, p. 1006, doi. 10.1038/sj.embor.7400787
By:
- Evdokimov, Artem G.;
- Pokross, Matthew E.;
- Egorov, Nikolay S.;
- Zaraisky, Andrey G.;
- Yampolsky, Ilya V.;
- Merzlyak, Ekaterina M.;
- Shkoporov, Andrey N.;
- Sander, Ian;
- Lukyanov, Konstantin A.;
- Chudakov, Dmitriy M.
Publication type:
Article
Natural Flt3Lg-Based Chimeric Antigen Receptor (Flt3-CAR) T Cells Successfully Target Flt3 on AML Cell Lines.
Published in:
Vaccines, 2021, v. 9, n. 11, p. 1238, doi. 10.3390/vaccines9111238
By:
- Maiorova, Varvara;
- Mollaev, Murad D.;
- Vikhreva, Polina;
- Kulakovskaya, Elena;
- Pershin, Dmitry;
- Chudakov, Dmitriy M.;
- Kibardin, Alexey;
- Maschan, Michael A.;
- Larin, Sergey
Publication type:
Article
Longitudinal high-throughput TCR repertoire profiling reveals the dynamics of T-cell memory formation after mild COVID-19 infection.
Published in:
eLife, 2021, p. 1, doi. 10.7554/eLife.63502
By:
- Minervina, Anastasia A.;
- Komech, Ekaterina A.;
- Titov, Aleksei;
- Koraichi, Meriem Bensouda;
- Rosati, Elisa;
- Mamedov, Ilgar Z.;
- Franke, Andre;
- Efimov, Grigory A.;
- Chudakov, Dmitriy M.;
- Mora, Thierry;
- Walczak, Aleksandra M.;
- Lebedev, Yuri B.;
- Pogorelyy, Mikhail V.
Publication type:
Article
Functionally specialized human CD4+ T-cell subsets express physicochemically distinct TCRs.
Published in:
eLife, 2020, p. 1, doi. 10.7554/eLife.57063
By:
- Kasatskaya, Sofya A.;
- Ladell, Kristin;
- Egorov, Evgeniy S.;
- Miners, Kelly L.;
- Davydov, Alexey N.;
- Metsger, Maria;
- Staroverov, Dmitry B.;
- Matveyshina, Elena K.;
- Shagina, Irina A.;
- Mamedov, Ilgar Z.;
- Izraelson, Mark;
- Shelyakin, Pavel V.;
- Britanova, Olga V.;
- Price, David A.;
- Chudakov, Dmitriy M.
Publication type:
Article
Deconvolution of B cell receptor repertoire in multiple sclerosis patients revealed a delay in tBreg maturation.
Published in:
Frontiers in Immunology, 2022, v. 13, p. 1, doi. 10.3389/fimmu.2022.803229
By:
- Lomakin, Yakov A.;
- Zvyagin, Ivan V.;
- Ovchinnikova, Leyla A.;
- Kabilov, Marsel R.;
- Staroverov, Dmitriy B.;
- Mikelov, Artem;
- Tupikin, Alexey E.;
- Zakharova, Maria Y.;
- Bykova, Nadezda A.;
- Mukhina, Vera S.;
- Favorov, Alexander V.;
- Ivanova, Maria;
- Simaniv, Taras;
- Rubtsov, Yury P.;
- Chudakov, Dmitriy M.;
- Zakharova, Maria N.;
- Illarioshkin, Sergey N.;
- Belogurov Jr., Alexey A.;
- Gabibov, Alexander G.
Publication type:
Article
Benchmarking of T cell receptor repertoire profiling methods reveals large systematic biases.
Published in:
Nature Biotechnology, 2021, v. 39, n. 2, p. 236, doi. 10.1038/s41587-020-0656-3
By:
- Barennes, Pierre;
- Quiniou, Valentin;
- Shugay, Mikhail;
- Egorov, Evgeniy S.;
- Davydov, Alexey N.;
- Chudakov, Dmitriy M.;
- Uddin, Imran;
- Ismail, Mazlina;
- Oakes, Theres;
- Chain, Benny;
- Eugster, Anne;
- Kashofer, Karl;
- Rainer, Peter P.;
- Darko, Samuel;
- Ransier, Amy;
- Douek, Daniel C.;
- Klatzmann, David;
- Mariotti-Ferrandiz, Encarnita
Publication type:
Article
Reply to "Evaluation of immune repertoire inference methods from RNA-seq data".
Published in:
Nature Biotechnology, 2018, v. 36, n. 11, p. 1035, doi. 10.1038/nbt.4296
By:
- Bolotin, Dmitriy A;
- Poslavsky, Stanislav;
- Davydov, Alexey N;
- Chudakov, Dmitriy M
Publication type:
Article
Antigen receptor repertoire profiling from RNA-seq data.
Published in:
Nature Biotechnology, 2017, v. 35, n. 10, p. 908, doi. 10.1038/nbt.3979
By:
- Bolotin, Dmitriy A;
- Poslavsky, Stanislav;
- Davydov, Alexey N;
- Frenkel, Felix E;
- Fanchi, Lorenzo;
- Zolotareva, Olga I;
- Hemmers, Saskia;
- Putintseva, Ekaterina V;
- Obraztsova, Anna S;
- Shugay, Mikhail;
- Ataullakhanov, Ravshan I;
- Rudensky, Alexander Y;
- Schumacher, Ton N;
- Chudakov, Dmitriy M
Publication type:
Article
A genetically encoded photosensitizer.
Published in:
Nature Biotechnology, 2006, v. 24, n. 1, p. 95, doi. 10.1038/nbt1175
By:
- Bulina, Maria E;
- Chudakov, Dmitriy M;
- Britanova, Olga V;
- Yanushevich, Yurii G;
- Staroverov, Dmitry B;
- Chepurnykh, Tatyana V;
- Merzlyak, Ekaterina M;
- Shkrob, Maria A;
- Lukyanov, Sergey;
- Lukyanov, Konstantin A
Publication type:
Article
Photoswitchable cyan fluorescent protein for protein tracking.
Published in:
Nature Biotechnology, 2004, v. 22, n. 11, p. 1435, doi. 10.1038/nbt1025
By:
- Chudakov, Dmitriy M.;
- Verkhusha, Vladislav V.;
- Staroverov, Dmitry B.;
- Souslova, Ekaterina A.;
- Lukyanov, Sergey;
- Lukyanov, Konstantin A.
Publication type:
Article
Corrigendum: Kindling fluorescent proteins for precise in vivo photolabeling.
Published in:
Nature Biotechnology, 2003, v. 21, n. 4, p. 452, doi. 10.1038/nbt0403-452a
By:
- Chudakov, Dmitriy M.;
- Belousov, Vsevolod V.;
- Zaraisky, Andrey G.;
- Novoselov, Vladimir V.;
- Staroverov, Dmitry B.;
- Zorov, Dmitry B.;
- Lukyanov, Sergey;
- Lukyanov, Konstantin A.
Publication type:
Article
Kindling fluorescent proteins for precise in vivo photolabeling.
Published in:
Nature Biotechnology, 2003, v. 21, n. 2, p. 191, doi. 10.1038/nbt778
By:
- Chudakov, Dmitriy M.;
- Belousov, Vsevolod V.;
- Zaraisky, Andrey G.;
- Novoselov, Vladimir V.;
- Staroverov, Dmitry B.;
- Zorov, Dmitry B.;
- Lukyanov, Sergey;
- Lukyanov, Konstantin A.
Publication type:
Article
In vivo imaging of ligand receptor binding with Gaussia luciferase complementation.
Published in:
Nature Medicine, 2012, v. 18, n. 1, p. 172, doi. 10.1038/nm.2590
By:
- Luker, Kathryn E;
- Mihalko, Laura Anne;
- Schmidt, Bradley T;
- Lewin, Sarah A;
- Ray, Paramita;
- Shcherbo, Dmitry;
- Chudakov, Dmitriy M;
- Luker, Gary D
Publication type:
Article
MiXCR: software for comprehensive adaptive immunity profiling.
Published in:
Nature Methods, 2015, v. 12, n. 5, p. 380, doi. 10.1038/nmeth.3364
By:
- Bolotin, Dmitriy A;
- Poslavsky, Stanislav;
- Mitrophanov, Igor;
- Shugay, Mikhail;
- Mamedov, Ilgar Z;
- Putintseva, Ekaterina V;
- Chudakov, Dmitriy M
Publication type:
Article
Towards error-free profiling of immune repertoires.
Published in:
Nature Methods, 2014, v. 11, n. 6, p. 653, doi. 10.1038/nmeth.2960
By:
- Shugay, Mikhail;
- Britanova, Olga V;
- Merzlyak, Ekaterina M;
- Turchaninova, Maria A;
- Mamedov, Ilgar Z;
- Tuganbaev, Timur R;
- Bolotin, Dmitriy A;
- Staroverov, Dmitry B;
- Putintseva, Ekaterina V;
- Plevova, Karla;
- Linnemann, Carsten;
- Shagin, Dmitriy;
- Pospisilova, Sarka;
- Lukyanov, Sergey;
- Schumacher, Ton N;
- Chudakov, Dmitriy M
Publication type:
Article
MiTCR: software for T-cell receptor sequencing data analysis.
Published in:
Nature Methods, 2013, v. 10, n. 9, p. 813, doi. 10.1038/nmeth.2555
By:
- Bolotin, Dmitriy A;
- Shugay, Mikhail;
- Mamedov, Ilgar Z;
- Putintseva, Ekaterina V;
- Turchaninova, Maria A;
- Zvyagin, Ivan V;
- Britanova, Olga V;
- Chudakov, Dmitriy M
Publication type:
Article
Near-infrared fluorescent proteins.
Published in:
Nature Methods, 2010, v. 7, n. 10, p. 827, doi. 10.1038/nmeth.1501
By:
- Shcherbo, Dmitry;
- Shemiakina, Irina I.;
- Ryabova, Anastasiya V.;
- Luker, Kathryn E.;
- Schmidt, Bradley T.;
- Souslova, Ekaterina A.;
- Gorodnicheva, Tatiana V.;
- Strukova, Lydia;
- Shidlovskiy, Konstantin M;
- Britanova, Olga V.;
- Zaraisky, Andrey G.;
- Lukyanov, Konstantin A.;
- Loschenov, Victor B.;
- Luker, Gary D.;
- Chudakov, Dmitriy M.
Publication type:
Article
Cell culture medium affects GFP photostability: a solution.
Published in:
2009
By:
- Bogdanov, Alexey M.;
- Bogdanova, Ekaterina A.;
- Chudakov, Dmitriy M.;
- Gorodnicheva, Tatiana V.;
- Lukyanov, Sergey;
- Lukyanov, Konstantin A.
Publication type:
Letter
Bright far-red fluorescent protein for whole-body imaging.
Published in:
Nature Methods, 2007, v. 4, n. 9, p. 741, doi. 10.1038/nmeth1083
By:
- Shcherbo, Dmitry;
- Merzlyak, Ekaterina M.;
- Chepurnykh, Tatiana V.;
- Fradkov, Arkady F.;
- Ermakova, Galina V.;
- Solovieva, Elena A.;
- Lukyanov, Konstantin A.;
- Bogdanova, Ekaterina A.;
- Zaraisky, Andrey G.;
- Lukyanov, Sergey;
- Chudakov, Dmitriy M.
Publication type:
Article
Bright monomeric red fluorescent protein with an extended fluorescence lifetime.
Published in:
Nature Methods, 2007, v. 4, n. 7, p. 555, doi. 10.1038/nmeth1062
By:
- Merzlyak, Ekaterina M.;
- Goedhart, Joachim;
- Shcherbo, Dmitry;
- Bulina, Mariya E.;
- Shcheglov, Aleksandr S.;
- Fradkov, Arkady F.;
- Gaintzeva, Anna;
- Lukyanov, Konstantin A.;
- Lukyanov, Sergey;
- Gadella, Theodorus W. J.;
- Chudakov, Dmitriy M.
Publication type:
Article
Comparative Analysis of B-Cell Receptor Repertoires Induced by Live Yellow Fever Vaccine in Young and Middle-Age Donors.
Published in:
Frontiers in Immunology, 2018, p. N.PAG, doi. 10.3389/fimmu.2018.02309
By:
- Davydov, Alexey N.;
- Obraztsova, Anna S.;
- Lebedin, Mikhail Y.;
- Turchaninova, Maria A.;
- Staroverov, Dmitriy B.;
- Merzlyak, Ekaterina M.;
- Sharonov, George V.;
- Kladova, Olga;
- Shugay, Mikhail;
- Britanova, Olga V.;
- Chudakov, Dmitriy M.
Publication type:
Article
The Changing Landscape of Naive T Cell Receptor Repertoire With Human Aging.
Published in:
Frontiers in Immunology, 2018, p. N.PAG, doi. 10.3389/fimmu.2018.01618
By:
- Egorov, Evgeny S.;
- Kasatskaya, Sofya A.;
- Zubov, Vasiliy N.;
- Izraelson, Mark;
- Nakonechnaya, Tatiana O.;
- Staroverov, Dmitriy B.;
- Angius, Andrea;
- Cucca, Francesco;
- Mamedov, Ilgar Z.;
- Rosati, Elisa;
- Franke, Andre;
- Shugay, Mikhail;
- Pogorelyy, Mikhail V.;
- Chudakov, Dmitriy M.;
- Britanova, Olga V.
Publication type:
Article
Optimized Peptide-MHC Multimer Protocols for Detection and Isolation of Autoimmune T-Cells.
Published in:
Frontiers in Immunology, 2018, p. 1, doi. 10.3389/fimmu.2018.01378
By:
- Dolton, Garry;
- Zervoudi, Efthalia;
- Rius, Cristina;
- Wall, Aaron;
- Thomas, Hannah L.;
- Fuller, Anna;
- Yeo, Lorraine;
- Legut, Mateusz;
- Wheeler, Sophie;
- Attaf, Meriem;
- Chudakov, Dmitriy M.;
- Choy, Ernest;
- Peakman, Mark;
- Sewell, Andrew K.
Publication type:
Article
HRES-1/Rab4 Promotes the Formation of LC3+ Autophagosomes and the Accumulation of Mitochondria during Autophagy.
Published in:
PLoS ONE, 2014, v. 9, n. 1, p. 1, doi. 10.1371/journal.pone.0084392
By:
- Talaber, Gergely;
- Miklossy, Gabriella;
- Oaks, Zachary;
- Liu, Yuxin;
- Tooze, Sharon A.;
- Chudakov, Dmitriy M.;
- Banki, Katalin;
- Perl, Andras
Publication type:
Article
Molecular Mechanism of a Green-Shifted, pH-Dependent Red Fluorescent Protein mKate Variant.
Published in:
PLoS ONE, 2011, v. 6, n. 8, p. 1, doi. 10.1371/journal.pone.0023513
By:
- Qi Wang;
- Byrnes, Laura J.;
- Bo Shui;
- Röhrig, Ute F.;
- Singh, Avtar;
- Chudakov, Dmitriy M.;
- Lukyanov, Sergey;
- Zipfel, Warren R.;
- Kotlikoff, Michael I.;
- Sondermann, Holger
Publication type:
Article
Spectrally-Resolved Response Properties of the Three Most Advanced FRET Based Fluorescent Protein Voltage Probes.
Published in:
PLoS ONE, 2009, v. 4, n. 2, p. 1, doi. 10.1371/journal.pone.0004555
By:
- Mutoh, Hiroki;
- Perron, Amelie;
- Dimitrov, Dimitar;
- Iwamoto, Yuka;
- Akemann, Walther;
- Chudakov, Dmitriy M.;
- Knöpfel, Thomas
Publication type:
Article
VDJviz: a versatile browser for immunogenomics data.
Published in:
BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2799-7
By:
- Bagaev, Dmitriy V.;
- Zvyagin, Ivan V.;
- Putintseva, Ekaterina V.;
- Izraelson, Mark;
- Britanova, Olga V.;
- Chudakov, Dmitriy M.;
- Shugay, Mikhail
Publication type:
Article
Deep cfDNA fragment end profiling enables cancer detection.
Published in:
Molecular Cancer, 2022, v. 21, n. 1, p. 1, doi. 10.1186/s12943-021-01491-8
By:
- Zhitnyuk, Yulia V.;
- Koval, Anastasia P.;
- Alferov, Aleksandr A.;
- Shtykova, Yanina A.;
- Mamedov, Ilgar Z.;
- Kushlinskii, Nikolay E.;
- Chudakov, Dmitriy M.;
- Shcherbo, Dmitry S.
Publication type:
Article
Pinpointing the tumor-specific T cells via TCR clusters.
Published in:
eLife, 2022, p. 1, doi. 10.7554/eLife.77274
By:
- Goncharov, Mikhail M.;
- Bryushkova, Ekaterina A.;
- Sharaev, Nikita I.;
- Skatova, Valeria D.;
- Baryshnikova, Anastasiya M.;
- Sharonov, George V.;
- Karnaukhov, Vadim;
- Vakhitova, Maria T.;
- Samoylenko, Igor V.;
- Demidov, Lev V.;
- Lukyanov, Sergey;
- Chudakov, Dmitriy M.;
- Serebrovskaya, Ekaterina O.
Publication type:
Article
Astroglia are a possible cellular substrate of angiotensin(1-7) effects in the rostral ventrolateral medulla.
Published in:
Cardiovascular Research, 2010, v. 87, n. 3, p. 578, doi. 10.1093/cvr/cvq059
By:
- Fang Guo;
- Beihui Liu;
- Feige Tang;
- Lane, Samantha;
- Souslova, Ekaterina A.;
- Chudakov, Dmitriy M.;
- Paton, Julian F. R.;
- Kasparov, Sergey
Publication type:
Article
Convergence, plasticity, and tissue residence of regulatory T cell response via TCR repertoire prism.
Published in:
eLife, 2024, p. 1, doi. 10.7554/eLife.89382
By:
- Nakonechnaya, Tatyana O.;
- Moltedo, Bruno;
- Putintseva, Ekaterina V.;
- Leyn, Sofya;
- Bolotin, Dmitry A.;
- Britanova, Olga V.;
- Shugay, Mikhail;
- Chudakov, Dmitriy M.
Publication type:
Article
Novel bimodal TRBD1-TRBD2 rearrangements with dual or absent D-region contribute to TRB V-(D)-J combinatorial diversity.
Published in:
Frontiers in Immunology, 2023, p. 01, doi. 10.3389/fimmu.2023.1245175
By:
- Smirnova, Anastasia O.;
- Miroshnichenkova, Anna M.;
- Belyaeva, Laima D.;
- Kelmanson, Ilya V.;
- Lebedev, Yuri B.;
- Mamedov, Ilgar Z.;
- Chudakov, Dmitriy M.;
- Komkov, Alexander Y.
Publication type:
Article
Large-scale template-based structural modeling of T-cell receptors with known antigen specificity reveals complementarity features.
Published in:
Frontiers in Immunology, 2023, p. 1, doi. 10.3389/fimmu.2023.1224969
By:
- Shcherbinin, Dmitrii S.;
- Karnaukhov, Vadim K.;
- Zvyagin, Ivan V.;
- Chudakov, Dmitriy M.;
- Shugay, Mikhail
Publication type:
Article
The Structure of Ca2+ Sensor Case16 Reveals the Mechanism of Reaction to Low Ca2+ Concentrations.
Published in:
Sensors (14248220), 2010, v. 10, n. 9, p. 8143, doi. 10.3390/s100908143
By:
- Leder, Lukas;
- Stark, Wilhelm;
- Freuler, Felix;
- Marsh, May;
- Meyerhofer, Marco;
- Stettler, Thomas;
- Mayr, Lorenz M.;
- Britanova, Olga V.;
- Strukova, Lydia A.;
- Chudakov, Dmitriy M.;
- Souslova, Ekaterina A.
Publication type:
Article
The Structure of Ca2+ Sensor Case16 Reveals the Mechanism of Reaction to Low Ca2+ Concentrations.
Published in:
Sensors (14248220), 2010, v. 10, n. 8, p. 8143, doi. 10.3390/s100908143
By:
- Leder, Lukas;
- Stark, Wilhelm;
- Freuler, Felix;
- Marsh, May;
- Meyerhofer, Marco;
- Stettler, Thomas;
- Mayr, Lorenz M.;
- Britanova, Olga V.;
- Strukova, Lydia A.;
- Chudakov, Dmitriy M.;
- Souslova, Ekaterina A.
Publication type:
Article
VDJtools: Unifying Post-analysis of T Cell Receptor Repertoires.
Published in:
PLoS Computational Biology, 2015, v. 11, n. 11, p. 1, doi. 10.1371/journal.pcbi.1004503
By:
- Shugay, Mikhail;
- Bagaev, Dmitriy V.;
- Turchaninova, Maria A.;
- Bolotin, Dmitriy A.;
- Britanova, Olga V.;
- Putintseva, Ekaterina V.;
- Pogorelyy, Mikhail V.;
- Nazarov, Vadim I.;
- Zvyagin, Ivan V.;
- Kirgizova, Vitalina I.;
- Kirgizov, Kirill I.;
- Skorobogatova, Elena V.;
- Chudakov, Dmitriy M.
Publication type:
Article
Fast and Precise Protein Tracking Using Repeated Reversible Photoactivation.
Published in:
Traffic, 2006, v. 7, n. 10, p. 1304, doi. 10.1111/j.1600-0854.2006.00468.x
By:
- Chudakov, Dmitriy M.;
- Chepurnykh, Tatyana V.;
- Belousov, Vsevolod V.;
- Lukyanov, Sergey;
- Lukyanov, Konstantin A.
Publication type:
Article
Naïve Regulatory T Cell Subset Is Altered in X-Linked Agammaglobulinemia.
Published in:
Frontiers in Immunology, 2021, v. 12, p. 1, doi. 10.3389/fimmu.2021.697307
By:
- Shelyakin, Pavel V.;
- Lupyr, Ksenia R.;
- Egorov, Evgeny S.;
- Kofiadi, Ilya A.;
- Staroverov, Dmitriy B.;
- Kasatskaya, Sofya A.;
- Kriukova, Valeriia V.;
- Shagina, Irina A.;
- Merzlyak, Ekaterina M.;
- Nakonechnaya, Tatiana O.;
- Latysheva, Elena A.;
- Manto, Irina A.;
- Khaitov, Musa R.;
- Lukyanov, Sergey A.;
- Chudakov, Dmitriy M.;
- Britanova, Olga V.
Publication type:
Article
Clonal selection in the human Vδ1 T cell repertoire indicates γδ TCR-dependent adaptive immune surveillance.
Published in:
Nature Communications, 2017, v. 8, n. 3, p. 14760, doi. 10.1038/ncomms14760
By:
- Davey, Martin S.;
- Willcox, Carrie R.;
- Joyce, Stephen P.;
- Ladell, Kristin;
- Kasatskaya, Sofya A.;
- McLaren, James E.;
- Hunter, Stuart;
- Salim, Mahboob;
- Mohammed, Fiyaz;
- Price, David A.;
- Chudakov, Dmitriy M.;
- Willcox, Benjamin E.
Publication type:
Article
Photoswitchable cyan fluorescent protein as a FRET donor.
Published in:
Microscopy Research & Technique, 2006, v. 69, n. 3, p. 207, doi. 10.1002/jemt.20278
By:
- Souslova, Ekaterina A.;
- Chudakov, Dmitriy M.
Publication type:
Article
Application of nonsense-mediated primer exclusion (NOPE) for preparation of unique molecular barcoded libraries.
Published in:
BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3815-2
By:
- Shagin, Dmitriy A.;
- Turchaninova, Maria A.;
- Shagina, Irina A.;
- Shugay, Mikhail;
- Zaretsky, Andrew R.;
- Zueva, Olga I.;
- Bolotin, Dmitriy A.;
- Lukyanov, Sergey;
- Chudakov, Dmitriy M.
Publication type:
Article
Inhibitory IL-10-producing CD4+ T cells are T-bet-dependent and facilitate cytomegalovirus persistence via coexpression of arginase-1.
Published in:
eLife, 2023, p. 1, doi. 10.7554/eLife.79165
By:
- Clement, Mathew;
- Ladell, Kristin;
- Miners, Kelly L.;
- Marsden, Morgan;
- Chapman, Lucy;
- Figueras, Anna Cardus;
- Scott, Jake;
- Andrews, Robert;
- Clare, Simon;
- Kriukova, Valeriia V.;
- Lupyr, Ksenia R.;
- Britanova, Olga V.;
- Withers, David R.;
- Jones, Simon A.;
- Chudakov, Dmitriy M.;
- Price, David A.;
- Humphreys, Ian R.
Publication type:
Article
The use of non-functional clonotypes as a natural calibrator for quantitative bias correction in adaptive immune receptor repertoire profiling.
Published in:
eLife, 2023, p. 1, doi. 10.7554/eLife.69157
By:
- Smirnova, Anastasia O.;
- Miroshnichenkova, Anna M.;
- Olshanskaya, Yulia V.;
- Maschan, Michael A.;
- Lebedev, Yuri B.;
- Chudakov, Dmitriy M.;
- Mamedov, Ilgar Z.;
- Komkov, Alexander
Publication type:
Article
Memory persistence and differentiation into antibody-secreting cells accompanied by positive selection in longitudinal BCR repertoires.
Published in:
eLife, 2022, p. 1, doi. 10.7554/eLife.79254
By:
- Mikelov, Artem;
- Alekseeva, Evgeniia I.;
- Komech, Ekaterina A.;
- Staroverov, Dmitry B.;
- Turchaninova, Maria A.;
- Shugay, Mikhail;
- Chudakov, Dmitriy M.;
- Bazykin, Georgii A.;
- Zvyagin, Ivan V.
Publication type:
Article
Persisting fetal clonotypes influence the structure and overlap of adult human T cell receptor repertoires.
Published in:
PLoS Computational Biology, 2017, v. 13, n. 7, p. 1, doi. 10.1371/journal.pcbi.1005572
By:
- Pogorelyy, Mikhail V.;
- Elhanati, Yuval;
- Marcou, Quentin;
- Sycheva, Anastasiia L.;
- Komech, Ekaterina A.;
- Nazarov, Vadim I.;
- Britanova, Olga V.;
- Chudakov, Dmitriy M.;
- Mamedov, Ilgar Z.;
- Lebedev, Yury B.;
- Mora, Thierry;
- Walczak, Aleksandra M.
Publication type:
Article

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