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dCas9-based epigenome editing suggests acquisition of histone methylation is not sufficient for target gene repression.
- Published in:
- Nucleic Acids Research, 2017, v. 45, n. 17, p. 9901, doi. 10.1093/nar/gkx578
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- Publication type:
- Article
Effects on the transcriptome upon deletion of a distal element cannot be predicted by the size of the H3K27Ac peak in human cells.
- Published in:
- Nucleic Acids Research, 2016, v. 44, n. 9, p. 4123, doi. 10.1093/nar/gkv1530
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- Publication type:
- Article
Analysis of an artificial zinc finger epigenetic modulator: widespread binding but limited regulation.
- Published in:
- Nucleic Acids Research, 2014, v. 42, n. 16, p. 10856, doi. 10.1093/nar/gku708
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- Publication type:
- Article
Integration of Hi-C and ChIP-seq data reveals distinct types of chromatin linkages.
- Published in:
- Nucleic Acids Research, 2012, v. 40, n. 16, p. 7690, doi. 10.1093/nar/gks501
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- Publication type:
- Article
Sole-Search: an integrated analysis program for peak detection and functional annotation using ChIP-seq data.
- Published in:
- Nucleic Acids Research, 2010, v. 38, n. 3, p. e13, doi. 10.1093/nar/gkp1012
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- Publication type:
- Article
The NIH Roadmap Epigenomics Mapping Consortium.
- Published in:
- Nature Biotechnology, 2010, v. 28, n. 10, p. 1045, doi. 10.1038/nbt1010-1045
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- Publication type:
- Article
DNA hypomethylation within specific transposable element families associates with tissue-specific enhancer landscape.
- Published in:
- Nature Genetics, 2013, v. 45, n. 7, p. 836, doi. 10.1038/ng.2649
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- Publication type:
- Article
Recombinant antibodies to histone post-translational modifications.
- Published in:
- Nature Methods, 2013, v. 10, n. 10, p. 992, doi. 10.1038/nmeth.2605
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- Publication type:
- Article
4C-seq revealed long-range interactions of a functional enhancer at the 8q24 prostate cancer risk locus.
- Published in:
- Scientific Reports, 2016, p. 22462, doi. 10.1038/srep22462
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- Publication type:
- Article
Large-scale manipulation of promoter DNA methylation reveals context-specific transcriptional responses and stability.
- Published in:
- Genome Biology, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s13059-022-02728-5
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- Publication type:
- Article
LOcating Non-Unique matched Tags (LONUT) to Improve the Detection of the Enriched Regions for ChIP-seq Data.
- Published in:
- PLoS ONE, 2013, v. 8, n. 6, p. 1, doi. 10.1371/journal.pone.0067788
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- Publication type:
- Article
Epigenetic Modulation of miR-122 Facilitates Human Embryonic Stem Cell Self-Renewal and Hepatocellular Carcinoma Proliferation.
- Published in:
- PLoS ONE, 2011, v. 6, n. 11, p. 1, doi. 10.1371/journal.pone.0027740
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- Publication type:
- Article
Characterization of the Contradictory Chromatin Signatures at the 3' Exons of Zinc Finger Genes.
- Published in:
- PLoS ONE, 2011, v. 6, n. 2, p. 1, doi. 10.1371/journal.pone.0017121
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- Publication type:
- Article
ZNF274 Recruits the Histone Methyltransferase SETDB1 to the 3' Ends of ZNF Genes.
- Published in:
- PLoS ONE, 2010, v. 5, n. 12, p. 1, doi. 10.1371/journal.pone.0015082
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- Publication type:
- Article
Site-Specific Initiation of Transcription by RNA Polymerase II.
- Published in:
- Proceedings of the Society for Experimental Biology & Medicine, 1993, v. 203, n. 2, p. 127, doi. 10.3181/00379727-203-43583
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- Publication type:
- Article
TENET 2.0: Identification of key transcriptional regulators and enhancers in lung adenocarcinoma.
- Published in:
- PLoS Genetics, 2020, v. 16, n. 9, p. 1, doi. 10.1371/journal.pgen.1009023
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- Publication type:
- Article
Insights from genomic profiling of transcription factors.
- Published in:
- 2009
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- Publication type:
- journal article
Identification and characterization of CRG-L2, a new marker for liver tumor development.
- Published in:
- Oncogene, 2003, v. 22, n. 11, p. 1730, doi. 10.1038/sj.onc.1206309
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- Publication type:
- Article
Identification of novel pRb binding sites using CpG microarrays suggests that E2F recruits pRb to specific genomic sites during S?phase.
- Published in:
- Oncogene, 2003, v. 22, n. 10, p. 1445, doi. 10.1038/sj.onc.1206264
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- Publication type:
- Article
Expression profiling and identification of novel genes in hepatocellular carcinomas.
- Published in:
- Oncogene, 2001, v. 20, n. 21, p. 2704, doi. 10.1038/sj.onc.1204391
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- Publication type:
- Article
A high-resolution 3D epigenomic map reveals insights into the creation of the prostate cancer transcriptome.
- Published in:
- Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-12079-8
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- Publication type:
- Article
FOXC1 Binds Enhancers and Promotes Cisplatin Resistance in Bladder Cancer.
- Published in:
- Cancers, 2022, v. 14, n. 7, p. 1717, doi. 10.3390/cancers14071717
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- Publication type:
- Article
The Enigmatic HOX Genes: Can We Crack Their Code?
- Published in:
- Cancers, 2019, v. 11, n. 3, p. 323, doi. 10.3390/cancers11030323
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- Publication type:
- Article
Genomic Approaches That Aid in the Identification of Transcription Factor Target Genes.
- Published in:
- Experimental Biology & Medicine, 2004, v. 229, n. 8, p. 705, doi. 10.1177/153537020422900803
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- Publication type:
- Article
CpG Island microarray probe sequences derived from a physical library are representative of CpG Islands annotated on the human genome.
- Published in:
- Nucleic Acids Research, 2005, v. 33, n. 9, p. 2952, doi. 10.1093/nar/gki582
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- Publication type:
- Article
Transcriptional regulation of the dihydrofolate reductase gene.
- Published in:
- BioEssays, 1996, v. 18, n. 1, p. 55, doi. 10.1002/bies.950180111
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- Publication type:
- Article
Identification of activated enhancers and linked transcription factors in breast, prostate, and kidney tumors by tracing enhancer networks using epigenetic traits.
- Published in:
- Epigenetics & Chromatin, 2016, v. 9, p. 1, doi. 10.1186/s13072-016-0102-4
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- Publication type:
- Article
Making sense of GWAS: using epigenomics and genome engineering to understand the functional relevance of SNPs in non‑coding regions of the human genome.
- Published in:
- Epigenetics & Chromatin, 2015, v. 9, p. 1, doi. 10.1186/s13072-015-0050-4
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- Publication type:
- Article
Altering cancer transcriptomes using epigenomic inhibitors.
- Published in:
- Epigenetics & Chromatin, 2015, v. 8, n. 1, p. 1, doi. 10.1186/1756-8935-8-9
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- Publication type:
- Article
ZBTB33 binds unmethylated regions of the genome associated with actively expressed genes.
- Published in:
- Epigenetics & Chromatin, 2013, v. 6, n. 1, p. 1, doi. 10.1186/1756-8935-6-13
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- Publication type:
- Article
Genome-wide analysis of HOXC4 and HOXC6 regulated genes and binding sites in prostate cancer cells.
- Published in:
- PLoS ONE, 2020, v. 15, n. 2, p. 1, doi. 10.1371/journal.pone.0228590
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- Publication type:
- Article
Three‐dimensional analysis reveals altered chromatin interaction by enhancer inhibitors harbors TCF7L2‐regulated cancer gene signature.
- Published in:
- Journal of Cellular Biochemistry, 2019, v. 120, n. 3, p. 3056, doi. 10.1002/jcb.27449
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- Publication type:
- Article
Selective regulation of lymphopoiesis and leukemogenesis by individual zinc fingers of Ikaros.
- Published in:
- Nature Immunology, 2013, v. 14, n. 10, p. 1073, doi. 10.1038/ni.2707
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- Publication type:
- Article
Intermediate DNA methylation is a conserved signature of genome regulation.
- Published in:
- Nature Communications, 2015, v. 6, n. 2, p. 6363, doi. 10.1038/ncomms7363
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- Publication type:
- Article
Regulatory network decoded from epigenomes of surface ectoderm-derived cell types.
- Published in:
- Nature Communications, 2014, v. 5, n. 11, p. 5442, doi. 10.1038/ncomms6442
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- Publication type:
- Article
Functional annotation of colon cancer risk SNPs.
- Published in:
- Nature Communications, 2014, v. 5, n. 9, p. 5114, doi. 10.1038/ncomms6114
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- Publication type:
- Article
Large-scale manipulation of promoter DNA methylation reveals context-specific transcriptional responses and stability.
- Published in:
- Genome Biology, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s13059-022-02728-5
- By:
- Publication type:
- Article
Inferring regulatory element landscapes and transcription factor networks from cancer methylomes.
- Published in:
- Genome Biology, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s13059-015-0668-3
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- Publication type:
- Article
Cell type-specific binding patterns reveal that TCF7L2 can be tethered to the genome by association with GATA3.
- Published in:
- Genome Biology, 2012, v. 13, n. 9, p. 1, doi. 10.1186/gb-2012-13-9-r52
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- Publication type:
- Article
Direct recruitment of N-myc to target gene promoters.
- Published in:
- Molecular Carcinogenesis, 2000, v. 29, n. 2, p. 76, doi. 10.1002/1098-2744(200010)29:2<76::AID-MC4>3.0.CO;2-Y
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- Publication type:
- Article
CAD, a c-Myc target gene, is not deregulated in Burkitt's lymphoma cell lines.
- Published in:
- Molecular Carcinogenesis, 2000, v. 27, n. 2, p. 84, doi. 10.1002/(SICI)1098-2744(200002)27:2<84::AID-MC4>3.0.CO;2-3
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- Publication type:
- Article
No effect of loss of E2F1 on liver regeneration or hepatocarcinogenesis in C57BL/6J or C3H/HeJ mice.
- Published in:
- Molecular Carcinogenesis, 1999, v. 25, n. 4, p. 295, doi. 10.1002/(SICI)1098-2744(199908)25:4<295::AID-MC8>3.0.CO;2-9
- By:
- Publication type:
- Article
Strain-dependent differences in DNA synthesis and gene expression in the regenerating livers of C57BL/6J and C3H/HeJ mice.
- Published in:
- Molecular Carcinogenesis, 1995, v. 14, n. 1, p. 46, doi. 10.1002/mc.2940140109
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- Publication type:
- Article
Reduction of ZFX levels decreases histone H4 acetylation and increases Pol2 pausing at target promoters.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 12, p. 6850, doi. 10.1093/nar/gkae372
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- Publication type:
- Article
Characterization of the ZFX family of transcription factors that bind downstream of the start site of CpG island promoters.
- Published in:
- Nucleic Acids Research, 2020, v. 48, n. 11, p. 5986, doi. 10.1093/nar/gkaa384
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- Publication type:
- Article
CRISPR-mediated deletion of prostate cancer risk-associated CTCF loop anchors identifies repressive chromatin loops.
- Published in:
- Genome Biology, 2018, v. 19, n. 1, p. N.PAG, doi. 10.1186/s13059-018-1531-0
- By:
- Publication type:
- Article
Effects of Gentamicin on Trypsin, Chymotrypsin, and Collagenase.
- Published in:
- Journal of Infectious Diseases, 1978, v. 138, n. 2, p. 257
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- Publication type:
- Article
Comprehensive Functional Annotation of 77 Prostate Cancer Risk Loci.
- Published in:
- PLoS Genetics, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pgen.1004102
- By:
- Publication type:
- Article
Genome-Wide Analysis of KAP1 Binding Suggests Autoregulation of KRAB-ZNFs.
- Published in:
- PLoS Genetics, 2007, v. 3, n. 6, p. e89, doi. 10.1371/journal.pgen.0030089
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- Publication type:
- Article
Ezh2-dCas9 and KRAB-dCas9 enable engineering of epigenetic memory in a context-dependent manner.
- Published in:
- Epigenetics & Chromatin, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s13072-019-0275-8
- By:
- Publication type:
- Article