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Increased SARS-CoV-2 Testing Capacity with Pooled Saliva Samples.
Published in:
2021
By:
- Watkins, Anne E.;
- Fenichel, Eli P.;
- Weinberger, Daniel M.;
- Vogels, Chantal B. F.;
- Brackney, Doug E.;
- Casanovas-Massana, Arnau;
- Campbell, Melissa;
- Fournier, John;
- Bermejo, Santos;
- Datta, Rupak;
- Dela Cruz, Charles S.;
- Farhadian, Shelli F.;
- Akiko Iwasaki;
- Ko, Albert I.;
- Grubaugh, Nathan D.;
- Wyllie, Anne L.;
- Iwasaki, Akiko;
- Yale IMPACT Research Team2
Publication type:
journal article
Real-time public health communication of local SARS-CoV-2 genomic epidemiology.
Published in:
PLoS Biology, 2020, v. 18, n. 8, p. 1, doi. 10.1371/journal.pbio.3000869
By:
- Kalinich, Chaney C.;
- Jensen, Cole G.;
- Neugebauer, Peter;
- Petrone, Mary E.;
- Peña-Hernández, Mario;
- Ott, Isabel M.;
- Wyllie, Anne L.;
- Alpert, Tara;
- Vogels, Chantal B. F.;
- Fauver, Joseph R.;
- Grubaugh, Nathan D.;
- Brito, Anderson F.
Publication type:
Article
Sequencing SARS-CoV-2 genomes from saliva.
Published in:
Virus Evolution, 2022, v. 8, n. 1, p. 1, doi. 10.1093/ve/veab098
By:
- Alpert, Tara;
- Vogels, Chantal B F;
- Breban, Mallery I;
- Petrone, Mary E;
- Wyllie, Anne L;
- Grubaugh, Nathan D;
- Fauver, Joseph R
Publication type:
Article
Pooled RNA-extraction-free testing of saliva for the detection of SARS-CoV-2.
Published in:
Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-34662-2
By:
- Allicock, Orchid M.;
- Yolda-Carr, Devyn;
- Todd, John A.;
- Wyllie, Anne L.
Publication type:
Article
Evaluation of the Liberty16 Mobile Real Time PCR Device for Use With the SalivaDirect Assay for SARS-CoV-2 Testing.
Published in:
Frontiers in Cellular & Infection Microbiology, 2022, v. 11, p. 1, doi. 10.3389/fcimb.2021.808773
By:
- Yolda-Carr, Devyn;
- Thammavongsa, Darani A.;
- Vega, Noel;
- Turner, Susan J.;
- Pickering, Paul J.;
- Wyllie, Anne L.
Publication type:
Article
The COVID-19 XPRIZE and the need for scalable, fast, and widespread testing.
Published in:
2020
By:
- MacKay, Matthew J.;
- Hooker, Anna C.;
- Afshinnekoo, Ebrahim;
- Salit, Marc;
- Kelly, Jason;
- Feldstein, Jonathan V.;
- Haft, Nick;
- Schenkel, Doug;
- Nambi, Subhalaxmi;
- Cai, Yizhi;
- Zhang, Feng;
- Church, George;
- Dai, Junbiao;
- Wang, Cliff L.;
- Levy, Shawn;
- Huber, Jeff;
- Ji, Hanlee P.;
- Kriegel, Alison;
- Wyllie, Anne L.;
- Mason, Christopher E.
Publication type:
Letter
Acute encephalopathy with elevated CSF inflammatory markers as the initial presentation of COVID-19.
Published in:
2020
By:
- Farhadian, Shelli;
- Glick, Laura R.;
- Vogels, Chantal B. F.;
- Thomas, Jared;
- Chiarella, Jennifer;
- Casanovas-Massana, Arnau;
- Zhou, Jing;
- Odio, Camila;
- Vijayakumar, Pavithra;
- Geng, Bertie;
- Fournier, John;
- Bermejo, Santos;
- Fauver, Joseph R.;
- Alpert, Tara;
- Wyllie, Anne L.;
- Turcotte, Cynthia;
- Steinle, Matthew;
- Paczkowski, Patrick;
- Dela Cruz, Charles;
- Wilen, Craig
Publication type:
journal article
Molecular surveillance on Streptococcus pneumoniae carriage in non-elderly adults; little evidence for pneumococcal circulation independent from the reservoir in children.
Published in:
Scientific Reports, 2016, p. 34888, doi. 10.1038/srep34888
By:
- Wyllie, Anne L.;
- Rümke, Lidewij W.;
- Arp, Kayleigh;
- Bosch, Astrid A. T. M.;
- Bruin, Jacob P.;
- Rots, Nynke Y.;
- Wijmenga-Monsuur, Alienke J.;
- Sanders, Elisabeth A. M.;
- Trzciński, Krzysztof
Publication type:
Article
Molecular surveillance of nasopharyngeal carriage of Streptococcus pneumoniae in children vaccinated with conjugated polysaccharide pneumococcal vaccines.
Published in:
Scientific Reports, 2016, p. 23809, doi. 10.1038/srep23809
By:
- Wyllie, Anne L.;
- Wijmenga-Monsuur, Alienke J.;
- van Houten, Marlies A.;
- Bosch, Astrid A. T. M.;
- Groot, James A.;
- van Engelsdorp Gastelaars, Jody;
- Bruin, Jacob P.;
- Bogaert, Debby;
- Rots, Nynke Y.;
- Sanders, Elisabeth A. M.;
- Trzciński, Krzysztof
Publication type:
Article
Exploring Immune Development in Infants With Moderate to Severe Atopic Dermatitis.
Published in:
Frontiers in Immunology, 2018, p. 1, doi. 10.3389/fimmu.2018.00630
By:
- Hulshof, Lies;
- Overbeek, Saskia A.;
- Wyllie, Anne L.;
- Chu, Mei Ling J. N.;
- Bogaert, Debby;
- de Jager, Wilco;
- Knippels, Leon M. J.;
- Sanders, Elisabeth A. M.;
- van Aalderen, Wim M. C.;
- Garssen, Johan;
- van’t Land, Belinda;
- Sprikkelman, Aline B.
Publication type:
Article
Saliva-based methods for SARS-CoV-2 testing in low- and middle-income countries.
Published in:
Bulletin of the World Health Organization, 2022, v. 100, n. 12, p. 808, doi. 10.2471/BLT.22.288526
By:
- Tan, Steph H.;
- Allicock, Orchid M.;
- Katamba, Achilles;
- Carrington, Christine V. F.;
- Wyllie, Anne L.;
- Armstrong-Hough, Mari
Publication type:
Article
Carriage of Streptococcus pneumoniae in Aged Adults with Influenza-Like-Illness.
Published in:
PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0119875
By:
- Krone, Cassandra L.;
- Wyllie, Anne L.;
- van Beek, Josine;
- Rots, Nynke Y.;
- Oja, Anna E.;
- Chu, Mei Ling J. N.;
- Bruin, Jacob P.;
- Bogaert, Debby;
- Sanders, Elisabeth A. M.;
- Trzciński, Krzysztof
Publication type:
Article
<i>Streptococcus pneumoniae</i> in Saliva of Dutch Primary School Children.
Published in:
PLoS ONE, 2014, v. 9, n. 7, p. 1, doi. 10.1371/journal.pone.0102045
By:
- Wyllie, Anne L.;
- Chu, Mei Ling J. N.;
- Schellens, Mariëlle H. B.;
- van Engelsdorp Gastelaars, Jody;
- Jansen, Marc D.;
- van der Ende, Arie;
- Bogaert, Debby;
- Sanders, Elisabeth A. M.;
- Trzciński, Krzysztof
Publication type:
Article
Superiority of Trans-Oral over Trans-Nasal Sampling in Detecting <i>Streptococcus pneumoniae</i> Colonization in Adults.
Published in:
PLoS ONE, 2013, v. 8, n. 3, p. 1, doi. 10.1371/journal.pone.0060520
By:
- Trzciński, Krzysztof;
- Bogaert, Debby;
- Wyllie, Anne;
- Chu, Mei Ling J. N.;
- van der Ende, Arie;
- Bruin, Jacob P.;
- van den Dobbelsteen, Germie;
- Veenhoven, Reinier H.;
- Sanders, Elisabeth A. M.
Publication type:
Article
Development of the Nasopharyngeal Microbiota in Infants with Cystic Fibrosis.
Published in:
2016
By:
- Prevaes, Sabine M. P. J.;
- de Winter-de Groot, Karin M.;
- Janssens, Hettie M.;
- de Steenhuijsen Piters, Wouter A. A.;
- Tramper-Stranders, Gerdien A.;
- Wyllie, Anne L.;
- Hasrat, Raiza;
- Tiddens, Harm A.;
- van Westreenen, Mireille;
- van der Ent, Cornelis K.;
- Sanders, Elisabeth A. M.;
- Bogaert, Debby
Publication type:
journal article
Pneumococcal genetic variability in age-dependent bacterial carriage.
Published in:
eLife, 2022, p. 1, doi. 10.7554/eLife.69244
By:
- Kremer, Philip H. C.;
- Ferwerda, Bart;
- Bootsma, Hester J.;
- Rots, Nienke Y.;
- Wijmenga-Monsuur, Alienke J.;
- Sanders, Elisabeth A. M.;
- Trzciński, Krzysztof;
- Wyllie, Anne L.;
- Turner, Paul;
- van der Ende, Arie;
- Brouwer, Matthijs C.;
- Bentley, Stephen D.;
- van de Beek, Diederik;
- Lees, John A.
Publication type:
Article
Joint sequencing of human and pathogen genomes reveals the genetics of pneumococcal meningitis.
Published in:
Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-09976-3
By:
- Lees, John A.;
- Ferwerda, Bart;
- Kremer, Philip H. C.;
- Wheeler, Nicole E.;
- Serón, Mercedes Valls;
- Croucher, Nicholas J.;
- Gladstone, Rebecca A.;
- Bootsma, Hester J.;
- Rots, Nynke Y.;
- Wijmega-Monsuur, Alienke J.;
- Sanders, Elisabeth A. M.;
- Trzciński, Krzysztof;
- Wyllie, Anne L.;
- Zwinderman, Aeilko H.;
- van den Berg, Leonard H.;
- van Rheenen, Wouter;
- Veldink, Jan H.;
- Harboe, Zitta B.;
- Lundbo, Lene F.;
- de Groot, Lisette C. P. G. M.
Publication type:
Article
Tracking smell loss to identify healthcare workers with SARS-CoV-2 infection.
Published in:
PLoS ONE, 2021, v. 16, n. 3, p. 1, doi. 10.1371/journal.pone.0248025
By:
- Weiss, Julian J.;
- Attuquayefio, Tuki N.;
- White, Elizabeth B.;
- Li, Fangyong;
- Herz, Rachel S.;
- White, Theresa L.;
- Campbell, Melissa;
- Geng, Bertie;
- Datta, Rupak;
- Wyllie, Anne L.;
- Grubaugh, Nathan D.;
- Casanovas-Massana, Arnau;
- Muenker, M. Catherine;
- Moore, Adam J.;
- Handoko, Ryan;
- Iwasaki, Akiko;
- Martinello, Richard A.;
- Ko, Albert I.;
- Small, Dana M.;
- Farhadian, Shelli F.
Publication type:
Article
Detection of SARS-CoV-2 RNA by multiplex RT-qPCR.
Published in:
PLoS Biology, 2020, v. 18, n. 10, p. 1, doi. 10.1371/journal.pbio.3000867
By:
- Kudo, Eriko;
- Israelow, Benjamin;
- Vogels, Chantal B. F.;
- Lu, Peiwen;
- Wyllie, Anne L.;
- Tokuyama, Maria;
- Venkataraman, Arvind;
- Brackney, Doug E.;
- Ott, Isabel M.;
- Petrone, Mary E.;
- Earnest, Rebecca;
- Lapidus, Sarah;
- Muenker, M. Catherine;
- Moore, Adam J.;
- Casanovas-Massana, Arnau;
- Omer, Saad B.;
- Dela Cruz, Charles S.;
- Farhadian, Shelli F.;
- Ko, Albert I.;
- Grubaugh, Nathan D.
Publication type:
Article
Serotype Patterns of Pneumococcal Disease in Adults Are Correlated With Carriage Patterns in Older Children.
Published in:
Clinical Infectious Diseases, 2021, v. 72, n. 11, p. e768, doi. 10.1093/cid/ciaa1480
By:
- Wyllie, Anne L;
- Warren, Joshua L;
- Regev-Yochay, Gili;
- Givon-Lavi, Noga;
- Dagan, Ron;
- Weinberger, Daniel M
Publication type:
Article
Variation of growth characteristics of pneumococcus with environmental conditions.
Published in:
BMC Microbiology, 2019, v. 19, n. 1, p. 1, doi. 10.1186/s12866-019-1671-8
By:
- Tóthpál, Adrienn;
- Desobry, Katherine;
- Joshi, Shreyas S.;
- Wyllie, Anne L.;
- Weinberger, Daniel M.
Publication type:
Article
Saliva RT-PCR Sensitivity Over the Course of SARS-CoV-2 Infection.
Published in:
2022
By:
- Wyllie, Anne L.;
- Premsrirut, Prem K.
Publication type:
Letter to the Editor
Loop-Mediated Isothermal Amplification (LAMP) Detection of SARS-CoV-2 and Myriad Other Applications.
Published in:
Journal of Biomolecular Techniques, 2021, v. 32, n. 3, p. 89
By:
- Moore, Keith J. M.;
- Cahill, Jeremy;
- Aidelberg, Guy;
- Aronoff, Rachel;
- Bektaş, Ali;
- Bezdan, Daniela;
- Butler, Daniel J.;
- Chittur, Sridar V.;
- Codyre, Martin;
- Federici, Fernan;
- Tanner, Nathan A.;
- Tighe, Scott W.;
- True, Randy;
- Ware, Sarah B.;
- Wyllie, Anne L.;
- Afshin, Evan E.;
- Bendesky, Andres;
- Chang, Connie B.;
- Rosa, Richard II Dela;
- Elhaik, Eran
Publication type:
Article
Association of Upper Respiratory Streptococcus pneumoniae Colonization With Severe Acute Respiratory Syndrome Coronavirus 2 Infection Among Adults.
Published in:
Clinical Infectious Diseases, 2023, v. 76, n. 7, p. 1209, doi. 10.1093/cid/ciac907
By:
- Parker, Anna M;
- Jackson, Nicole;
- Awasthi, Shevya;
- Kim, Hanna;
- Alwan, Tess;
- Wyllie, Anne L;
- Baldwin, Alisha B;
- Brennick, Nicole B;
- Moehle, Erica A;
- Giannikopoulos, Petros;
- Kogut, Katherine;
- Holland, Nina;
- Mora-Wyrobek, Ana;
- Eskenazi, Brenda;
- Riley, Lee W;
- Lewnard, Joseph A
Publication type:
Article
Testing Saliva to Reveal the Submerged Cases of the COVID-19 Iceberg.
Published in:
Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.721635
By:
- Borghi, Elisa;
- Massa, Valentina;
- Zuccotti, Gianvincenzo;
- Wyllie, Anne L.
Publication type:
Article
Longitudinal Immune Profiling of a Severe Acute Respiratory Syndrome Coronavirus 2 Reinfection in a Solid Organ Transplant Recipient.
Published in:
2022
By:
- Klein, Jonathan;
- Brito, Anderson F;
- Trubin, Paul;
- Lu, Peiwen;
- Wong, Patrick;
- Alpert, Tara;
- Peña-Hernández, Mario A;
- Haynes, Winston;
- Kamath, Kathy;
- Liu, Feimei;
- Vogels, Chantal B F;
- Fauver, Joseph R;
- Lucas, Carolina;
- Oh, Jieun;
- Mao, Tianyang;
- Silva, Julio;
- Wyllie, Anne L;
- Muenker, M Catherine;
- Casanovas-Massana, Arnau;
- Moore, Adam J
Publication type:
Case Study
Evaluation of saliva self-collection devices for SARS-CoV-2 diagnostics.
Published in:
2022
By:
- Allicock, Orchid M.;
- Petrone, Mary E.;
- Yolda-Carr, Devyn;
- Breban, Mallery;
- Walsh, Hannah;
- Watkins, Anne E.;
- Rothman, Jessica E.;
- Farhadian, Shelli F.;
- Grubaugh, Nathan D.;
- Wyllie, Anne L.
Publication type:
journal article

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