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OffScan: a universal and fast CRISPR off-target sites detection tool.
- Published in:
- BMC Genomics, 2020, v. 21, p. 1, doi. 10.1186/s12864-019-6241-9
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- Publication type:
- Article
Parallel algorithms for large-scale biological sequence alignment on Xeon-Phi based clusters.
- Published in:
- BMC Bioinformatics, 2016, v. 17, p. 11, doi. 10.1186/s12859-016-1128-0
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- Publication type:
- Article
Voluntary Vaccination through Perceiving Epidemic Severity in Social Networks.
- Published in:
- Complexity, 2019, p. 1, doi. 10.1155/2019/3901218
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- Publication type:
- Article
A review of artificial intelligence methods combined with Raman spectroscopy to identify the composition of substances.
- Published in:
- Journal of Raman Spectroscopy, 2022, v. 53, n. 1, p. 6, doi. 10.1002/jrs.6225
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- Publication type:
- Article
HyperVR: a hybrid deep ensemble learning approach for simultaneously predicting virulence factors and antibiotic resistance genes.
- Published in:
- NAR Genomics & Bioinformatics, 2023, v. 5, n. 1, p. 1, doi. 10.1093/nargab/lqad012
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- Publication type:
- Article
Mining bacterial NGS data vastly expands the complete genomes of temperate phages.
- Published in:
- NAR Genomics & Bioinformatics, 2022, v. 4, n. 3, p. 1, doi. 10.1093/nargab/lqac057
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- Publication type:
- Article
paraGSEA: a scalable approach for large-scale gene expression profiling.
- Published in:
- Nucleic Acids Research, 2017, v. 45, n. 17, p. 1, doi. 10.1093/nar/gkx679
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- Publication type:
- Article
A Hybrid Parallel Strategy Based on String Graph Theory to Improve De Novo DNA Assembly on the TianHe-2 Supercomputer.
- Published in:
- Interdisciplinary Sciences: Computational Life Sciences, 2016, v. 8, n. 2, p. 169, doi. 10.1007/s12539-015-0127-6
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- Publication type:
- Article
B-MIC: An Ultrafast Three-Level Parallel Sequence Aligner Using MIC.
- Published in:
- Interdisciplinary Sciences: Computational Life Sciences, 2016, v. 8, n. 1, p. 28, doi. 10.1007/s12539-015-0278-5
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- Publication type:
- Article
A Massively Parallel Computational Method of Reading Index Files for SOAPsnv.
- Published in:
- Interdisciplinary Sciences: Computational Life Sciences, 2015, v. 7, n. 4, p. 397, doi. 10.1007/s12539-015-0123-x
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- Publication type:
- Article
Cotton D genome assemblies built with long-read data unveil mechanisms of centromere evolution and stress tolerance divergence.
- Published in:
- BMC Biology, 2021, v. 19, n. 1, p. 1, doi. 10.1186/s12915-021-01041-0
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- Publication type:
- Article
BioERP: biomedical heterogeneous network-based self-supervised representation learning approach for entity relationship predictions.
- Published in:
- Bioinformatics, 2021, v. 37, n. 24, p. 4793, doi. 10.1093/bioinformatics/btab565
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- Publication type:
- Article
MultiDTI: drug–target interaction prediction based on multi-modal representation learning to bridge the gap between new chemical entities and known heterogeneous network.
- Published in:
- Bioinformatics, 2021, v. 37, n. 23, p. 4485, doi. 10.1093/bioinformatics/btab473
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- Publication type:
- Article
Bioinformatics applications on Apache Spark.
- Published in:
- GigaScience, 2018, v. 7, n. 8, p. N.PAG, doi. 10.1093/gigascience/giy098
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- Publication type:
- Article
SOAP3-dp: Fast, Accurate and Sensitive GPU-Based Short Read Aligner
- Published in:
- PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0065632
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- Publication type:
- Article
P-Hint-Hunt: a deep parallelized whole genome DNA methylation detection tool.
- Published in:
- BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3497-9
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- Publication type:
- Article
Machine Learning Applications in Drug Repurposing.
- Published in:
- Interdisciplinary Sciences: Computational Life Sciences, 2022, v. 14, n. 1, p. 15, doi. 10.1007/s12539-021-00487-8
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- Publication type:
- Article
Discovery of Genetic Biomarkers for Alzheimer's Disease Using Adaptive Convolutional Neural Networks Ensemble and Genome-Wide Association Studies.
- Published in:
- Interdisciplinary Sciences: Computational Life Sciences, 2021, v. 13, n. 4, p. 787, doi. 10.1007/s12539-021-00470-3
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- Publication type:
- Article
A Radiomics Signature to Quantitatively Analyze COVID-19-Infected Pulmonary Lesions.
- Published in:
- Interdisciplinary Sciences: Computational Life Sciences, 2021, v. 13, n. 1, p. 61, doi. 10.1007/s12539-020-00410-7
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- Publication type:
- Article
Review of CRISPR/Cas9 sgRNA Design Tools.
- Published in:
- Interdisciplinary Sciences: Computational Life Sciences, 2018, v. 10, n. 2, p. 455, doi. 10.1007/s12539-018-0298-z
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- Publication type:
- Article
LIVE: a manually curated encyclopedia of experimentally validated interactions of lncRNAs.
- Published in:
- Database: The Journal of Biological Databases & Curation, 2019, v. 2019, p. N.PAG, doi. 10.1093/database/baz011
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- Publication type:
- Article
NeRD: a multichannel neural network to predict cellular response of drugs by integrating multidimensional data.
- Published in:
- 2022
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- Publication type:
- Journal Article
MICA: A fast short-read aligner that takes full advantage of Many Integrated Core Architecture (MIC).
- Published in:
- BMC Bioinformatics, 2015, p. 1, doi. 10.1186/1471-2105-16-S7-S10
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- Publication type:
- Article
An Unbiased Quantum Random Number Generator Based on Boson Sampling.
- Published in:
- Advanced Quantum Technologies, 2024, v. 7, n. 1, p. 1, doi. 10.1002/qute.202300179
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- Publication type:
- Article
In silico and in vitro evaluation of kaempferol as a potential inhibitor of the SARS‐CoV‐2 main protease (3CLpro).
- Published in:
- Phytotherapy Research, 2021, v. 35, n. 6, p. 2841, doi. 10.1002/ptr.6998
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- Publication type:
- Article
Emerging Mutations in Nsp1 of SARS-CoV-2 and Their Effect on the Structural Stability.
- Published in:
- Pathogens, 2021, v. 10, n. 10, p. 1285, doi. 10.3390/pathogens10101285
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- Publication type:
- Article
MUSCLE: multi-view and multi-scale attentional feature fusion for microRNA–disease associations prediction.
- Published in:
- Briefings in Bioinformatics, 2024, v. 25, n. 3, p. 1, doi. 10.1093/bib/bbae167
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- Publication type:
- Article
GADRP: graph convolutional networks and autoencoders for cancer drug response prediction.
- Published in:
- Briefings in Bioinformatics, 2023, v. 24, n. 1, p. 1, doi. 10.1093/bib/bbac501
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- Publication type:
- Article
D3AI-CoV: a deep learning platform for predicting drug targets and for virtual screening against COVID-19.
- Published in:
- Briefings in Bioinformatics, 2022, v. 23, n. 3, p. 1, doi. 10.1093/bib/bbac147
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- Publication type:
- Article
SVPath: an accurate pipeline for predicting the pathogenicity of human exon structural variants.
- Published in:
- Briefings in Bioinformatics, 2022, v. 23, n. 2, p. 1, doi. 10.1093/bib/bbac014
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- Publication type:
- Article
DeepR2cov: deep representation learning on heterogeneous drug networks to discover anti-inflammatory agents for COVID-19.
- Published in:
- Briefings in Bioinformatics, 2021, v. 22, n. 6, p. 1, doi. 10.1093/bib/bbab226
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- Publication type:
- Article
MDA-GCNFTG: identifying miRNA-disease associations based on graph convolutional networks via graph sampling through the feature and topology graph.
- Published in:
- Briefings in Bioinformatics, 2021, v. 22, n. 6, p. 1, doi. 10.1093/bib/bbab165
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- Publication type:
- Article
A Review of Blockchain-Based Secure Sharing of Healthcare Data.
- Published in:
- Applied Sciences (2076-3417), 2022, v. 12, n. 15, p. 7912, doi. 10.3390/app12157912
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- Publication type:
- Article
Clustering-Evolutionary Random Support Vector Machine Ensemble for fMRI-Based Asperger Syndrome Diagnosis.
- Published in:
- Computer Journal, 2022, v. 65, n. 2, p. 251, doi. 10.1093/comjnl/bxaa023
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- Publication type:
- Article
SOAPfuse: an algorithm for identifying fusion transcripts from paired-end RNA-Seq data.
- Published in:
- Genome Biology, 2013, v. 14, n. 2, p. 1, doi. 10.1186/gb-2013-14-2-r12
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- Publication type:
- Article
Performance Improvement of Atmospheric Continuous-Variable Quantum Key Distribution with Untrusted Source.
- Published in:
- Entropy, 2021, v. 23, n. 6, p. 760, doi. 10.3390/e23060760
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- Publication type:
- Article
An efficient framework for generating robust adversarial examples.
- Published in:
- International Journal of Intelligent Systems, 2020, v. 35, n. 9, p. 1433, doi. 10.1002/int.22267
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- Publication type:
- Article
Efficient computation of motif discovery on Intel Many Integrated Core (MIC) Architecture.
- Published in:
- BMC Bioinformatics, 2018, v. 19, n. 9, p. 185, doi. 10.1186/s12859-018-2276-1
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- Publication type:
- Article
cmFSM: a scalable CPU-MIC coordinated drug-finding tool by frequent subgraph mining.
- Published in:
- 2018
- By:
- Publication type:
- Abstract
The Integrative Method Based on the Module-Network for Identifying Driver Genes in Cancer Subtypes.
- Published in:
- Molecules, 2018, v. 23, n. 2, p. 183, doi. 10.3390/molecules23020183
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- Publication type:
- Article
Improving prediction performance of general protein language model by domain-adaptive pretraining on DNA-binding protein.
- Published in:
- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-52293-7
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- Publication type:
- Article
Improving prediction performance of general protein language model by domain-adaptive pretraining on DNA-binding protein.
- Published in:
- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-52293-7
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- Publication type:
- Article
Deep learning in omics: a survey and guideline.
- Published in:
- Briefings in Functional Genomics, 2019, v. 18, n. 1, p. 41, doi. 10.1093/bfgp/ely030
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- Publication type:
- Article
Joint consensus and diversity for multi-view semi-supervised classification.
- Published in:
- Machine Learning, 2020, v. 109, n. 3, p. 445, doi. 10.1007/s10994-019-05844-9
- By:
- Publication type:
- Article
DMCM: a Data-adaptive Mutation Clustering Method to identify cancer-related mutation clusters.
- Published in:
- Bioinformatics, 2019, v. 35, n. 3, p. 389, doi. 10.1093/bioinformatics/bty624
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- Publication type:
- Article
VISPR-online: a web-based interactive tool to visualize CRISPR screening experiments.
- Published in:
- BMC Bioinformatics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12859-021-04275-5
- By:
- Publication type:
- Article