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- Title
MotifSuite: workflow for probabilistic motif detection and assessment.
- Authors
Claeys, Marleen; Storms, Valerie; Sun, Hong; Michoel, Tom; Marchal, Kathleen
- Abstract
Motivation: Probabilistic motif detection requires a multi-step approach going from the actual de novo regulatory motif finding up to a tedious assessment of the predicted motifs. MotifSuite, a user-friendly web interface streamlines this analysis flow. Its core consists of two post-processing procedures that allow prioritizing the motif detection output. The tools offered by MotifSuite are built around the well-established motif detection tool MotifSampler and can also be used in combination with any other probabilistic motif detection tool. Elaborate guidelines on each of its applications have been provided.Availability: http://homes.esat.kuleuven.be/bioi_marchal/MotifSuite/Index.htmContact: kamar@psb.ugent.be
- Subjects
PROBABILITY theory; PREDICTION theory; WORKFLOW software; COMPUTER networks; BIOINFORMATICS; WEB-based user interfaces; WEBSITES
- Publication
Bioinformatics, 2012, Vol 28, Issue 14, p1931
- ISSN
1367-4803
- Publication type
Article
- DOI
10.1093/bioinformatics/bts293