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- Title
Analysis of the Genome and Chromium Metabolism-Related Genes of <italic>Serratia</italic> sp. S2.
- Authors
Dong, Lanlan; Zhou, Simin; He, Yuan; Jia, Yan; Bai, Qunhua; Deng, Peng; Gao, Jieying; Li, Yingli; Xiao, Hong
- Abstract
This study is to investigate the genome sequence of <italic>Serratia</italic> sp. S2. The genomic DNA of <italic>Serratia</italic> sp. S2 was extracted and the sequencing library was constructed. The sequencing was carried out by Illumina 2000 and complete genomic sequences were obtained. Gene function annotation and bioinformatics analysis were performed by comparing with the known databases. The genome size of <italic>Serratia</italic> sp. S2 was 5,604,115 bp and the G+C content was 57.61%. There were 5373 protein coding genes, and 3732, 3614, and 3942 genes were respectively annotated into the GO, KEGG, and COG databases. There were 12 genes related to chromium metabolism in the <italic>Serratia</italic> sp. S2 genome. The whole genome sequence of <italic>Serratia</italic> sp. S2 is submitted to the GenBank database with gene accession number of LNRP00000000. Our findings may provide theoretical basis for the subsequent development of new biotechnology to repair environmental chromium pollution.
- Subjects
SERRATIA; NUCLEOTIDE sequencing; CHROMIUM; BIOINFORMATICS; POLLUTION
- Publication
Applied Biochemistry & Biotechnology, 2018, Vol 185, Issue 1, p140
- ISSN
0273-2289
- Publication type
Article
- DOI
10.1007/s12010-017-2639-5