Found: 7

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  • The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK.

    Published in:
    Virus Evolution, 2022, v. 8, n. 2, p. 1, doi. 10.1093/ve/veac080
    By:
    • Hill, Verity;
    • Plessis, Louis Du;
    • Peacock, Thomas P;
    • Aggarwal, Dinesh;
    • Colquhoun, Rachel;
    • Carabelli, Alesandro M;
    • Ellaby, Nicholas;
    • Gallagher, Eileen;
    • Groves, Natalie;
    • Jackson, Ben;
    • McCrone, J T;
    • O'Toole, Áine;
    • Price, Anna;
    • Sanderson, Theo;
    • Scher, Emily;
    • Southgate, Joel;
    • Volz, Erik;
    • Barclay, Wendy S;
    • Barrett, Jeffrey C;
    • Chand, Meera
    Publication type:
    Article

  • Tracking SARS-CoV-2 mutations and variants through the COG-UK-Mutation Explorer.

    Published in:
    Virus Evolution, 2022, v. 8, n. 1, p. 1, doi. 10.1093/ve/veac023
    By:
    • Wright, Derek W;
    • Harvey, William T;
    • Hughes, Joseph;
    • Cox, MacGregor;
    • Peacock, Thomas P;
    • Colquhoun, Rachel;
    • Jackson, Ben;
    • Orton, Richard;
    • Nielsen, Morten;
    • Hsu, Nienyun Sharon;
    • consortium, The COVID-19 Genomics UK (COG-UK);
    • Harrison, Ewan M;
    • Silva, Thushan I de;
    • Rambaut, Andrew;
    • Peacock, Sharon J;
    • Robertson, David L;
    • Carabelli, Alessandro M
    Publication type:
    Article

  • Assignment of epidemiological lineages in an emerging pandemic using the pangolin tool.

    Published in:
    Virus Evolution, 2021, v. 7, n. 2, p. 1, doi. 10.1093/ve/veab064
    By:
    • O'Toole, Áine;
    • Scher, Emily;
    • Underwood, Anthony;
    • Jackson, Ben;
    • Hill, Verity;
    • McCrone, John T;
    • Colquhoun, Rachel;
    • Ruis, Chris;
    • Abu-Dahab, Khalil;
    • Taylor, Ben;
    • Yeats, Corin;
    • Plessis, Louis du;
    • Maloney, Daniel;
    • Medd, Nathan;
    • Attwood, Stephen W;
    • Aanensen, David M;
    • Holmes, Edward C;
    • Pybus, Oliver G;
    • Rambaut, Andrew
    Publication type:
    Article

  • SCORPIO: a utility for defining and classifying mutation constellations of virus genomes.

    Published in:
    Bioinformatics, 2023, v. 39, n. 10, p. 1, doi. 10.1093/bioinformatics/btad575
    By:
    • Colquhoun, Rachel;
    • Jackson, Ben;
    • O'Toole, Áine;
    • Rambaut, Andrew
    Publication type:
    Article

  • Minos: variant adjudication and joint genotyping of cohorts of bacterial genomes.

    Published in:
    Genome Biology, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s13059-022-02714-x
    By:
    • Hunt, Martin;
    • Letcher, Brice;
    • Malone, Kerri M.;
    • Nguyen, Giang;
    • Hall, Michael B.;
    • Colquhoun, Rachel M.;
    • Lima, Leandro;
    • Schatz, Michael C.;
    • Ramakrishnan, Srividya;
    • Iqbal, Zamin
    Publication type:
    Article

  • Pandora: nucleotide-resolution bacterial pan-genomics with reference graphs.

    Published in:
    Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02473-1
    By:
    • Colquhoun, Rachel M.;
    • Hall, Michael B.;
    • Lima, Leandro;
    • Roberts, Leah W.;
    • Malone, Kerri M.;
    • Hunt, Martin;
    • Letcher, Brice;
    • Hawkey, Jane;
    • George, Sophie;
    • Pankhurst, Louise;
    • Iqbal, Zamin
    Publication type:
    Article

  • CLIMB-COVID: continuous integration supporting decentralised sequencing for SARS-CoV-2 genomic surveillance.

    Published in:
    2021
    By:
    • Nicholls, Samuel M.;
    • Poplawski, Radoslaw;
    • Bull, Matthew J.;
    • Underwood, Anthony;
    • Chapman, Michael;
    • Abu-Dahab, Khalil;
    • Taylor, Ben;
    • Colquhoun, Rachel M.;
    • Rowe, Will P. M.;
    • Jackson, Ben;
    • Hill, Verity;
    • O'Toole, Áine;
    • Rey, Sara;
    • Southgate, Joel;
    • Amato, Roberto;
    • Livett, Rich;
    • Gonçalves, Sónia;
    • Harrison, Ewan M.;
    • Peacock, Sharon J.;
    • Aanensen, David M.
    Publication type:
    Editorial