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- Title
Draft genome sequence of the extremely halophilic archaeon Haladaptatus cibarius type strain D43<sup>T</sup> isolated from fermented seafood.
- Authors
Hae-Won Lee; Dae-Won Kim; Mi-Hwa Lee; Byung-Yong Kim; Yong-Joon Cho; Kyung June Yim; Hye Seon Song; Jin-Kyu Rhee; Myung-Ji Seo; Hak-Jong Choi; Jong-Soon Choi; Dong-Gi Lee; Changmann Yoon; Young-Do Nam; Seong Woon Roh
- Abstract
An extremely halophilic archaeon, Haladaptatus cibarius D43T, was isolated from traditional Korean salt-rich fermented seafood. Strain D43T shows the highest 16S rRNA gene sequence similarity (98.7%) with Haladaptatus litoreus RO1-28T, is Gram-negative staining, motile, and extremely halophilic. Despite potential industrial applications of extremely halophilic archaea, their genome characteristics remain obscure. Here, we describe the whole genome sequence and annotated features of strain D43T. The 3,926,724 bp genome includes 4,092 protein-coding and 57 RNA genes (including 6 rRNA and 49 tRNA genes) with an average G + C content of 57.76%.
- Subjects
NUCLEOTIDE sequencing; HALOBACTERIUM genetics; ARCHAEBACTERIA; FERMENTED foods
- Publication
Standards in Genomic Sciences, 2015, Vol 10, Issue 1, p1
- ISSN
1944-3277
- Publication type
Article
- DOI
10.1186/s40793-015-0051-8