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Dynamic Changes of Proteases and Protease Inhibitors Revealed by Microarray Analysis in CA3 and Entorhinal Cortex during Epileptogenesis in the Rat.
Published in:
Epilepsia (Series 4), 2007, v. 48, p. 53, doi. 10.1111/j.1528-1167.2007.01290.x
By:
- Gorter, Jan A.;
- Van Vliet, Erwin A.;
- Rauwerda, Han;
- Breit, Timo;
- Stad, Robert;
- van Schaik, Linda;
- Vreugdenhil, Erno;
- Redeker, Sandra;
- Hendriksen, Erik;
- Aronica, Eleonora;
- da Silva, Fernando H. Lopes;
- Wadman, Wytse J.
Publication type:
Article
The Arabidopsis her1 mutant implicates GABA in E-2-hexenal responsiveness.
Published in:
Plant Journal, 2008, v. 53, n. 2, p. 197, doi. 10.1111/j.1365-313X.2007.03323.x
By:
- Mirabella, Rossana;
- Rauwerda, Han;
- Struys, Eduard A.;
- Jakobs, Cornelis;
- Triantaphylidès, Christian;
- Haring, Michel A.;
- Schuurink, Robert C.
Publication type:
Article
Improving small RNA-seq by using a synthetic spike-in set for size-range quality control together with a set for data normalization.
Published in:
Nucleic Acids Research, 2015, v. 43, n. 14, p. 1, doi. 10.1093/nar/gkv303
By:
- Locati, Mauro D.;
- Terpstra, Inez;
- de Leeuw, Wim C.;
- Kuzak, Mateusz;
- Rauwerda, Han;
- Ensink, Wim A.;
- van Leeuwen, Selina;
- Nehrdich, Ulrike;
- Spaink, Herman P.;
- Jonker, Martijs J.;
- Breit, Timo M.;
- Dekker, Rob J.
Publication type:
Article
Absence/presence calling in microarray-based CGH experiments with non-model organisms.
Published in:
Nucleic Acids Research, 2014, v. 42, n. 11, p. e94, doi. 10.1093/nar/gku343
By:
- Jonker, Martijs J.;
- de Leeuw, Wim C.;
- Marinković, Marino;
- Wittink, Floyd R. A.;
- Rauwerda, Han;
- Bruning, Oskar;
- Ensink, Wim A.;
- Fluit, Ad C.;
- Boel, C. H.;
- Jong, Mark de;
- Breit, Timo M.
Publication type:
Article
WRKY40 and WRKY6 act downstream of the green leaf volatile E-2-hexenal in Arabidopsis.
Published in:
Plant Journal, 2015, v. 83, n. 6, p. 1082, doi. 10.1111/tpj.12953
By:
- Mirabella, Rossana;
- Rauwerda, Han;
- Allmann, Silke;
- Scala, Alessandra;
- Spyropoulou, Eleni A.;
- Vries, Michel;
- Boersma, Maaike R.;
- Breit, Timo M.;
- Haring, Michel A.;
- Schuurink, Robert C.
Publication type:
Article
A Range Finding Protocol to Support Design for Transcriptomics Experimentation: Examples of <i>In-Vitro</i> and <i>In-Vivo</i> Murine UV Exposure.
Published in:
PLoS ONE, 2014, v. 9, n. 5, p. 1, doi. 10.1371/journal.pone.0097089
By:
- Bruning, Oskar;
- Rodenburg, Wendy;
- van Oostrom, Conny T.;
- Jonker, Martijs J.;
- de Jong, Mark;
- Dekker, Rob J.;
- Rauwerda, Han;
- Ensink, Wim A.;
- de Vries, Annemieke;
- Breit, Timo M.
Publication type:
Article
Potential New Antiepileptogenic Targets Indicated by Microarray Analysis in a Rat Model for Temporal Lobe Epilepsy.
Published in:
Journal of Neuroscience, 2006, v. 26, n. 43, p. 11083, doi. 10.1523/JNEUROSCI.2766-06.2006
By:
- Gorter, Jan A.;
- Van Vliet, Erwin A.;
- Aronica, Eleonora;
- Breit, Timo;
- Rauwerda, Han;
- Lopes da Silva, Fernando H.;
- Wadman, Wytse J.
Publication type:
Article
Integrating heterogeneous sequence informationfor transcriptome-wide microarray design; aZebrafish example.
Published in:
BMC Research Notes, 2010, v. 3, p. 192, doi. 10.1186/1756-0500-3-192
By:
- Rauwerda, Han;
- de Jong, Mark;
- de Leeuw, Wim C.;
- Spaink, Herman P.;
- Breit, Timo M.
Publication type:
Article
RNA isolation method for single embryotranscriptome analysis in zebrafish.
Published in:
BMC Research Notes, 2010, v. 3, p. 73, doi. 10.1186/1756-0500-3-73
By:
- de Jong, Mark;
- Rauwerda, Han;
- Bruning, Oskar;
- Verkooijen, Jurgo;
- Spaink, Herman P.;
- Breit, Timo M.
Publication type:
Article
Transcriptome dynamics in early zebrafish embryogenesis determined by high-resolution time course analysis of 180 successive, individual zebrafish embryos.
Published in:
BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3672-z
By:
- Rauwerda, Han;
- Pagano, Johanna F. B.;
- de Leeuw, Wim C.;
- Ensink, Wim;
- Nehrdich, Ulrike;
- de Jong, Mark;
- Jonker, Martijs;
- Spaink, Herman P.;
- Breit, Timo M.
Publication type:
Article
Mother-Specific Signature in the Maternal Transcriptome Composition of Mature, Unfertilized Zebrafish Eggs.
Published in:
PLoS ONE, 2016, v. 11, n. 1, p. 1, doi. 10.1371/journal.pone.0147151
By:
- Rauwerda, Han;
- Wackers, Paul;
- Pagano, Johanna F. B.;
- de Jong, Mark;
- Ensink, Wim;
- Dekker, Rob;
- Nehrdich, Ulrike;
- Spaink, Herman P.;
- Jonker, Martijs;
- Breit, Timo M.
Publication type:
Article
Confounding Factors in the Transcriptome Analysis of an In-Vivo Exposure Experiment.
Published in:
PLoS ONE, 2016, v. 11, n. 1, p. 1, doi. 10.1371/journal.pone.0145252
By:
- Bruning, Oskar;
- Rodenburg, Wendy;
- Wackers, Paul F. K.;
- van Oostrom, Conny;
- Jonker, Martijs J.;
- Dekker, Rob J.;
- Rauwerda, Han;
- Ensink, Wim A.;
- de Vries, Annemieke;
- Breit, Timo M.
Publication type:
Article
Identifying small RNAs derived from maternal- and somatic-type rRNAs in zebrafish development.
Published in:
Genome, 2018, v. 61, n. 5, p. 371, doi. 10.1139/gen-2017-0202
By:
- Locati, Mauro D.;
- Pagano, Johanna F.B.;
- Abdullah, Farah;
- Ensink, Wim A.;
- van Olst, Marina;
- van Leeuwen, Selina;
- Nehrdich, Ulrike;
- Spaink, Herman P.;
- Rauwerda, Han;
- Jonker, Martijs J.;
- Dekker, Rob J.;
- Breit, Timo M.;
- Crease, T.
Publication type:
Article
OligoRAP - an Oligo Re-Annotation Pipeline to improve annotation and estimate target specificity.
Published in:
BMC Proceedings, 2009, v. 3, p. 1, doi. 10.1186/1753-6561-3-S4-S4
By:
- Neerincx, Pieter B. T.;
- Rauwerda, Han;
- Haisheng Nie;
- Groenen, Martien A. M.;
- Breit, Timo M.;
- Leunissen, Jack A. M.
Publication type:
Article
Collaborative e-Science Experiments and Scientific Workflows.
Published in:
IEEE Internet Computing, 2011, v. 15, n. 4, p. 39, doi. 10.1109/MIC.2011.87
By:
- Belloum, Adam;
- Inda, Marcia A.;
- Vasunin, Dmitry;
- Korkhov, Vladimir;
- Zhao, Zhiming;
- Rauwerda, Han;
- Breit, Timo M.;
- Bubak, Marian;
- Hertzberger, Luis O.
Publication type:
Article

Found: 15