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Incomplete MyoD-induced transdifferentiation is associated with chromatin remodeling deficiencies.
Published in:
Nucleic Acids Research, 2017, v. 45, n. 20, p. 11684, doi. 10.1093/nar/gkx773
By:
- Manandhar, Dinesh;
- Lingyun Song;
- Kabadi, Ami;
- Kwon, Jennifer B.;
- Edsall, Lee E.;
- Ehrlich, Melanie;
- Tsumagari, Koji;
- Gersbach, Charles A.;
- Crawford, Gregory E.;
- Gordân, Raluca
Publication type:
Article
DNA binding by FOXP3 domain-swapped dimer suggests mechanisms of long-range chromosomal interactions.
Published in:
Nucleic Acids Research, 2015, v. 43, n. 2, p. 1268, doi. 10.1093/nar/gku1373
By:
- Yongheng Chen;
- Chunxia Chen;
- Zhe Zhang;
- Chun-Chi Liu;
- Johnson, Matthew E.;
- Espinoza, Celso A.;
- Edsall, Lee E.;
- Bing Ren;
- Xianghong Jasmine Zhou;
- Grant, Struan F.A.;
- Wells, Andrew D.;
- Lin Chen
Publication type:
Article
Distinct patterns of somatic alterations in a lymphoblastoid and a tumor genome derived from the same individual.
Published in:
Nucleic Acids Research, 2011, v. 39, n. 14, p. 6056, doi. 10.1093/nar/gkr221
By:
- Galante, Pedro A. F.;
- Parmigiani, Raphael B.;
- Zhao, Qi;
- Caballero, Otávia L.;
- de Souza, Jorge E.;
- Navarro, Fábio C. P.;
- Gerber, Alexandra L.;
- Nicolás, Marisa F.;
- Salim, Anna Christina M.;
- Silva, Ana Paula M.;
- Edsall, Lee;
- Devalle, Sylvie;
- Almeida, Luiz G.;
- Ye, Zhen;
- Kuan, Samantha;
- Pinheiro, Daniel G.;
- Tojal, Israel;
- Pedigoni, Renato G.;
- de Sousa, Rodrigo G. M. A.;
- Oliveira, Thiago Y. K.
Publication type:
Article
Exome Analysis Identified a Novel Mutation in the RBP4 Gene in a Consanguineous Pedigree with Retinal Dystrophy and Developmental Abnormalities.
Published in:
PLoS ONE, 2012, v. 7, n. 11, p. 1, doi. 10.1371/journal.pone.0050205
By:
- Cukras, Catherine;
- Gaasterland, Terry;
- Lee, Pauline;
- Gudiseva, Harini V.;
- Chavali, Venkata R. M.;
- Pullakhandam, Raghu;
- Maranhao, Bruno;
- Edsall, Lee;
- Soares, Sandra;
- Reddy, G. Bhanuprakash;
- Sieving, Paul A.;
- Ayyagari, Radha
Publication type:
Article
The medicinal leech genome encodes 21 innexin genes: different combinations are expressed by identified central neurons.
Published in:
Development Genes & Evolution, 2012, v. 222, n. 1, p. 29, doi. 10.1007/s00427-011-0387-z
By:
- Kandarian, Brandon;
- Sethi, Jasmine;
- Wu, Allan;
- Baker, Michael;
- Yazdani, Neema;
- Kym, Eunice;
- Sanchez, Alejandro;
- Edsall, Lee;
- Gaasterland, Terry;
- Macagno, Eduardo
Publication type:
Article
Human DNA methylomes at base resolution show widespread epigenomic differences.
Published in:
Nature, 2009, v. 462, n. 7271, p. 315, doi. 10.1038/nature08514
By:
- Lister, Ryan;
- Pelizzola, Mattia;
- Dowen, Robert H.;
- Hawkins, R. David;
- Hon, Gary;
- Tonti-Filippini, Julian;
- Nery, Joseph R.;
- Lee, Leonard;
- Zhen Ye;
- Que-Minh Ngo;
- Edsall, Lee;
- Antosiewicz-Bourget, Jessica;
- Stewart, Ron;
- Ruotti, Victor;
- Millar, A. Harvey;
- Thomson, James A.;
- Ren, Bing;
- Ecker, Joseph R.
Publication type:
Article
Dynamic chromatin states in human ES cells reveal potential regulatory sequences and genes involved in pluripotency.
Published in:
Cell Research, 2011, v. 21, n. 10, p. 1393, doi. 10.1038/cr.2011.146
By:
- Hawkins, R David;
- Hon, Gary C;
- Yang, Chuhu;
- Antosiewicz-Bourget, Jessica E;
- Lee, Leonard K;
- Ngo, Que-Minh;
- Klugman, Sarit;
- Ching, Keith A;
- Edsall, Lee E;
- Ye, Zhen;
- Kuan, Samantha;
- Yu, Pengzhi;
- Liu, Hui;
- Zhang, Xinmin;
- Green, Roland D;
- Lobanenkov, Victor V;
- Stewart, Ron;
- Thomson, James A;
- Ren, Bing
Publication type:
Article
Shared and distinct interactions of type 1 and type 2 Epstein-Barr Nuclear Antigen 2 with the human genome.
Published in:
BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10183-8
By:
- Viel, Kenyatta C. M. F.;
- Parameswaran, Sreeja;
- Donmez, Omer A.;
- Forney, Carmy R.;
- Hass, Matthew R.;
- Yin, Cailing;
- Jones, Sydney H.;
- Prosser, Hayley K.;
- Diouf, Arame A.;
- Gittens, Olivia E.;
- Edsall, Lee E.;
- Chen, Xiaoting;
- Rowden, Hope;
- Dunn, Katelyn A.;
- Guo, Rui;
- VonHandorf, Andrew;
- Leong, Merrin Man Long;
- Ernst, Kevin;
- Kaufman, Kenneth M.;
- Lawson, Lucinda P.
Publication type:
Article
Evaluating Chromatin Accessibility Differences Across Multiple Primate Species Using a Joint Modeling Approach.
Published in:
Genome Biology & Evolution, 2019, v. 11, n. 10, p. 3035, doi. 10.1093/gbe/evz218
By:
- Edsall, Lee E;
- Berrio, Alejandro;
- Majoros, William H;
- Swain-Lenz, Devjanee;
- Morrow, Shauna;
- Shibata, Yoichiro;
- Safi, Alexias;
- Wray, Gregory A;
- Crawford, Gregory E;
- Allen, Andrew S
Publication type:
Article
Integrative analysis of haplotype-resolved epigenomes across human tissues.
Published in:
Nature, 2015, v. 518, n. 7539, p. 350, doi. 10.1038/nature14217
By:
- Leung, Danny;
- Jung, Inkyung;
- Rajagopal, Nisha;
- Schmitt, Anthony;
- Selvaraj, Siddarth;
- Lee, Ah Young;
- Yen, Chia-An;
- Lin, Shin;
- Lin, Yiing;
- Qiu, Yunjiang;
- Xie, Wei;
- Yue, Feng;
- Hariharan, Manoj;
- Ray, Pradipta;
- Kuan, Samantha;
- Edsall, Lee;
- Yang, Hongbo;
- Chi, Neil C.;
- Zhang, Michael Q.;
- Ecker, Joseph R.
Publication type:
Article
A map of the cis-regulatory sequences in the mouse genome.
Published in:
Nature, 2012, v. 488, n. 7409, p. 116, doi. 10.1038/nature11243
By:
- Shen, Yin;
- Yue, Feng;
- McCleary, David F.;
- Ye, Zhen;
- Edsall, Lee;
- Kuan, Samantha;
- Wagner, Ulrich;
- Dixon, Jesse;
- Lee, Leonard;
- Lobanenkov, Victor V.;
- Ren, Bing
Publication type:
Article
Construction of a medicinal leech transcriptomedatabase and its application to the identification ofleech homologs of neural and innate immunegenes.
Published in:
BMC Genomics, 2010, v. 11, p. 407, doi. 10.1186/1471-2164-11-407
By:
- Macagno, Eduardo R.;
- Gaasterland, Terry;
- Edsall, Lee;
- Bafna, Vineet;
- Soares, Marcelo B.;
- Scheetz, Todd;
- Casavant, Thomas;
- Da Silva, Corinne;
- Wincker, Patrick;
- Tasiemski, Aurélie;
- Salzet, Michel
Publication type:
Article
Epigenetic and transcriptional dysregulation in CD4+ T cells in patients with atopic dermatitis.
Published in:
PLoS Genetics, 2022, v. 18, n. 5, p. 1, doi. 10.1371/journal.pgen.1009973
By:
- Eapen, Amy A.;
- Parameswaran, Sreeja;
- Forney, Carmy;
- Edsall, Lee E.;
- Miller, Daniel;
- Donmez, Omer;
- Dunn, Katelyn;
- Lu, Xiaoming;
- Granitto, Marissa;
- Rowden, Hope;
- Magier, Adam Z.;
- Pujato, Mario;
- Chen, Xiaoting;
- Kaufman, Kenneth;
- Bernstein, David I.;
- Devonshire, Ashley L.;
- Rothenberg, Marc E.;
- Weirauch, Matthew T.;
- Kottyan, Leah C.
Publication type:
Article

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