Found: 55
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Ligand-induced conformational changes in a thermophilic ribose-binding protein.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 50, doi. 10.1186/1472-6807-8-50
- Publication type:
- Article
A method for probabilistic mapping between protein structure and function taxonomies through cross training.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 40, doi. 10.1186/1472-6807-8-40
- Publication type:
- Article
PDBalert: automatic, recurrent remote homology tracking and protein structure prediction.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 51, doi. 10.1186/1472-6807-8-51
- Publication type:
- Article
Analysis on conservation of disulphide bonds and their structural features in homologous protein domain families.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 55, doi. 10.1186/1472-6807-8-55
- Publication type:
- Article
HOLLOW: Generating Accurate Representations of Channel and Interior Surfaces in Molecular Structures.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 49, doi. 10.1186/1472-6807-8-49
- Publication type:
- Article
Type II restriction endonuclease R.Hpy188I belongs to the GIY-YIG nuclease superfamily, but exhibits an unusual active site.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 48, doi. 10.1186/1472-6807-8-48
- Publication type:
- Article
Protein Functional Surfaces: Global Shape Matching and Local Spatial Alignments of Ligand Binding Sites.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 45, doi. 10.1186/1472-6807-8-45
- Publication type:
- Article
Flanking p10 contribution and sequence bias in matrix based epitope prediction: revisiting the assumption of independent binding pockets.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 44, doi. 10.1186/1472-6807-8-44
- Publication type:
- Article
Quantifying information transfer by protein domains: Analysis of the Fyn SH2 domain structure.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 43, doi. 10.1186/1472-6807-8-43
- Publication type:
- Article
The crystal structure of the catalytic domain of a eukaryotic guanylate cyclase.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 42, doi. 10.1186/1472-6807-8-42
- Publication type:
- Article
A knowledge-based structure-discriminating function that requires only main-chain atom coordinates.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 46, doi. 10.1186/1472-6807-8-46
- Publication type:
- Article
Comparative modelling by restraint-based conformational sampling.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-7
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- Publication type:
- Article
Knottin cyclization: impact on structure and dynamics.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 54, doi. 10.1186/1472-6807-8-54
- Publication type:
- Article
Residue contact-count potentials are as effective as residue-residue contact-type potentials for ranking protein decoys.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 53, doi. 10.1186/1472-6807-8-53
- Publication type:
- Article
LRRML: a conformational database and an XML description ofleucine-rich repeats (LRRs).
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 47, doi. 10.1186/1472-6807-8-47
- Publication type:
- Article
Modeling structure and flexibility of Candida antarctica lipase B in organic solvents.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-9
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- Article
Structural basis of GC-1 selectivity for thyroid hormone receptor isoforms.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-8
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- Publication type:
- Article
SELECTpro: effective protein model selection using astructure-based energy function resistant to BLUNDERs.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 52, doi. 10.1186/1472-6807-8-52
- Publication type:
- Article
Crystal structures of a purple acid phosphatase, representing different steps of this enzyme's catalytic cycle.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-6
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- Publication type:
- Article
Fast dynamics perturbation analysis for prediction of protein functional sites.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1
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- Publication type:
- Article
Identification of new, well-populated amino-acid sidechain rotamers involving hydroxyl-hydrogen atoms and sulfhydryl-hydrogen atoms.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-41
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- Publication type:
- Article
Multiple molecular dynamics simulation of the isoforms of human translation elongation factor 1A reveals reversible fluctuations between "open" and "closed" conformations and suggests specific for eEF1A1 affinity for Ca<sup>2+</sup>-calmodulin.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-4
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- Publication type:
- Article
Structural insights on the pamoic acid and the 8 kDa domain of DNA polymerase beta complex: Towards the design of higher-affinity inhibitors.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-22
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- Article
pi-Turns: types, systematics and the context of their occurrence in protein structures.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-39
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- Publication type:
- Article
Docking of molecules identified in bioactive medicinal plants extracts into the p50 NF-kappaB transcription factor: correlation with inhibition of NF-kappaB/DNA interactions and inhibitory effects on IL-8 gene expression.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-38
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- Publication type:
- Article
Contact prediction in protein modeling: Scoring, folding and refinement of coarse-grained models.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-36
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- Publication type:
- Article
Alternating evolutionary pressure in a genetic algorithm facilitates protein model selection.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-34
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- Article
The crystal structure of the putative peptide-binding fragment from the human Hsp40 protein Hdj1.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-3
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- Article
Protecting role of cosolvents in protein denaturation by SDS: a structural study.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-29
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- Article
Protein-segment universe exhibiting transitions at intermediate segment length in conformational subspaces.
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- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-37
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- Publication type:
- Article
CUSP: an algorithm to distinguish structurally conserved and unconserved regions in protein domain alignments and its application in the study of large length variations.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-28
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- Article
Statistical analysis of the Bacterial Carbohydrate Structure Data Base (BCSDB): Characteristics and diversity of bacterial carbohydrates in comparison with mammalian glycans.
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- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-35
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- Article
Structural characterization of CA1462, the Candida albicans thiamine pyrophosphokinase.
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- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-33
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- Article
Structural analysis of urate oxidase in complex with its natural substrate inhibited by cyanide: Mechanistic implications.
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- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-32
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- Article
Graphical analysis of NMR structural quality and interactive contact map of NOE assignments in ARIA.
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- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-30
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- Article
Systematic analysis of the effect of multiple templates on the accuracy of comparative models of protein structure.
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- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-31
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- Publication type:
- Article
PSAIA -- Protein Structure and Interaction Analyzer.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-21
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- Publication type:
- Article
Prediction of structural stability of short beta-hairpin peptides by molecular dynamics and knowledge-based potentials.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-27
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- Article
The backbone structure of the thermophilic Thermoanaerobacter tengcongensis ribose binding protein is essentially identical to its mesophilic E. coli homolog.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-20
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- Article
GANDivAWeb: A web server for detecting early folding units ("foldons") from protein 3D structures.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-15
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- Publication type:
- Article
"Hot cores" in proteins: Comparative analysis of the apolar contact area in structures from hyper/thermophilic and mesophilic organisms.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-14
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- Publication type:
- Article
Interactions between the quality control ubiquitin ligase CHIP and ubiquitin conjugating enzymes.
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- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-26
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- Article
K2D2: Estimation of protein secondary structure from circular dichroism spectra.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-25
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- Publication type:
- Article
Improving the accuracy of template-based predictions by mixing and matching between initial models.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-24
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- Publication type:
- Article
Exploring allosteric coupling in the α-subunit of Heterotrimeric G proteins using evolutionary and ensemble-based approaches.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-23
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- Publication type:
- Article
Preservation of protein clefts in comparative models.
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- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-2
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- Article
Solution structure of the Legionella pneumophila Mip-rapamycin complex.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-17
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- Article
Donor substrate recognition in the raffinose-bound E342A mutant of fructosyltransferase Bacillus subtilis levansucrase.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-16
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- Publication type:
- Article
Charge environments around phosphorylation sites in proteins.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-19
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- Publication type:
- Article
A multi-template combination algorithm for protein comparative modeling.
- Published in:
- BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-18
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- Publication type:
- Article