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- Title
MISA-web: a web server for microsatellite prediction.
- Authors
Beier, Sebastian; Thiel, Thomas; Münch, Thomas; Scholz, Uwe; Mascher, Martin
- Abstract
Motivation: Microsatellites are a widely-used marker system in plant genetics and forensics. The development of reliable microsatellite markers from resequencing data is challenging. Results: We extended MISA, a computational tool assisting the development of microsatellite markers, and reimplemented it as a web-based application. We improved compound microsatellite detection and added the possibility to display and export MISA results in GFF3 format for downstream analysis.
- Subjects
MICROSATELLITE repeats; INTERNET servers; PLANT genetics; WEB-based user interfaces; NUCLEOTIDE sequence
- Publication
Bioinformatics, 2017, Vol 33, Issue 16, p2583
- ISSN
1367-4803
- Publication type
Article
- DOI
10.1093/bioinformatics/btx198