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Distinct Gut Virome Profile of Pregnant Women With Type 1 Diabetes in the ENDIA Study.
- Published in:
- Open Forum Infectious Diseases, 2019, v. 6, n. 2, p. N.PAG, doi. 10.1093/ofid/ofz025
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- Publication type:
- Article
The Tasmanian devil microbiome--implications for conservation and management.
- Published in:
- Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0143-0
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- Publication type:
- Article
Relationship of circulating Plasmodium falciparum lifecycle stage to circulating parasitemia and total parasite biomass.
- Published in:
- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-32996-5
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- Publication type:
- Article
The Use of Imaging Mass Spectrometry to Study Peptide Toxin Distribution in Australian Sea Anemones.
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- Australian Journal of Chemistry, 2017, v. 70, n. 11, p. 1235, doi. 10.1071/CH17228
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- Publication type:
- Article
Molecular diagnosis of scabies using a novel probe-based polymerase chain reaction assay targeting high-copy number repetitive sequences in the Sarcoptes scabiei genome.
- Published in:
- PLoS Neglected Tropical Diseases, 2021, v. 15, n. 2, p. 1, doi. 10.1371/journal.pntd.0009149
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- Publication type:
- Article
High-quality nuclear genome for Sarcoptes scabiei—A critical resource for a neglected parasite.
- Published in:
- PLoS Neglected Tropical Diseases, 2020, v. 14, n. 10, p. 1, doi. 10.1371/journal.pntd.0008720
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- Publication type:
- Article
CLOVE: classification of genomic fusions into structural variation events.
- Published in:
- BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-017-1760-3
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- Publication type:
- Article
Molecular genetics and comparative genomics reveal RNAi is not functional in malaria parasites.
- Published in:
- Nucleic Acids Research, 2009, v. 37, n. 11, p. 3788, doi. 10.1093/nar/gkp239
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- Publication type:
- Article
Genome-wide interrogation of structural variation reveals novel African-specific prostate cancer oncogenic drivers.
- Published in:
- Genome Medicine, 2022, v. 14, n. 1, p. 1, doi. 10.1186/s13073-022-01096-w
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- Publication type:
- Article
Mitochondrial Genome Sequence of the Scabies Mite Provides Insight into the Genetic Diversity of Individual Scabies Infections.
- Published in:
- PLoS Neglected Tropical Diseases, 2016, v. 10, n. 2, p. 1, doi. 10.1371/journal.pntd.0004384
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- Publication type:
- Article
Removing unwanted variation from large-scale RNA sequencing data with PRPS.
- Published in:
- Nature Biotechnology, 2023, v. 41, n. 1, p. 82, doi. 10.1038/s41587-022-01440-w
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- Publication type:
- Article
Detection of clinically relevant early genomic lesions in B‐cell malignancies from circulating tumour DNA using a single hybridisation‐based next generation sequencing assay.
- Published in:
- British Journal of Haematology, 2018, v. 183, n. 1, p. 146, doi. 10.1111/bjh.14919
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- Publication type:
- Article
A single‐cell RNA expression atlas of normal, preneoplastic and tumorigenic states in the human breast.
- Published in:
- EMBO Journal, 2021, v. 40, n. 11, p. 1, doi. 10.15252/embj.2020107333
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- Publication type:
- Article
The UT family of MHC class I loci unique to non-eutherian mammals has limited polymorphism and tissue specific patterns of expression in the opossum.
- Published in:
- BMC Immunology, 2016, v. 17, p. 1, doi. 10.1186/s12865-016-0181-9
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- Publication type:
- Article
The Plasmodium falciparum transcriptome in severe malaria reveals altered expression of genes involved in important processes including surface antigen–encoding var genes.
- Published in:
- PLoS Biology, 2018, v. 16, n. 3, p. 1, doi. 10.1371/journal.pbio.2004328
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- Publication type:
- Article
cellsig plug-in enhances CIBERSORTx signature selection for multidataset transcriptomes with sparse multilevel modelling.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad685
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- Publication type:
- Article
StructuralVariantAnnotation: a R/Bioconductor foundation for a caller-agnostic structural variant software ecosystem.
- Published in:
- Bioinformatics, 2022, v. 38, n. 7, p. 2046, doi. 10.1093/bioinformatics/btac042
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- Publication type:
- Article
Interfacing Seurat with the R tidy universe.
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- Bioinformatics, 2021, v. 37, n. 22, p. 4100, doi. 10.1093/bioinformatics/btab404
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- Publication type:
- Article
VIRUSBreakend: Viral Integration Recognition Using Single Breakends.
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- Bioinformatics, 2021, v. 37, n. 19, p. 3115, doi. 10.1093/bioinformatics/btab343
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- Publication type:
- Article
Significant decline in anticancer immune capacity during puberty in the Tasmanian devil.
- Published in:
- Scientific Reports, 2017, p. 44716, doi. 10.1038/srep44716
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- Publication type:
- Article
Regression of devil facial tumour disease following immunotherapy in immunised Tasmanian devils.
- Published in:
- Scientific Reports, 2017, p. 43827, doi. 10.1038/srep43827
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- Publication type:
- Article
Integrating deep mutational scanning and low-throughput mutagenesis data to predict the impact of amino acid variants.
- Published in:
- GigaScience, 2023, v. 12, n. 1, p. 1, doi. 10.1093/gigascience/giad073
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- Publication type:
- Article
Unifying package managers, workflow engines, and containers: Computational reproducibility with BioNix.
- Published in:
- GigaScience, 2020, v. 9, n. 11, p. 1, doi. 10.1093/gigascience/giaa121
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- Publication type:
- Article
Genomic resources and draft assemblies of the human and porcine varieties of scabies mites, Sarcoptes scabiei var. hominis and var. suis.
- Published in:
- GigaScience, 2016, v. 5, p. 10, doi. 10.1186/s13742-016-0129-2
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- Publication type:
- Article
GRIDSS2: comprehensive characterisation of somatic structural variation using single breakend variants and structural variant phasing.
- Published in:
- Genome Biology, 2021, v. 22, p. 1, doi. 10.1186/s13059-021-02423-x
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- Publication type:
- Article
Detection of cell-free microbial DNA using a contaminant-controlled analysis framework.
- Published in:
- Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02401-3
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- Publication type:
- Article
tidybulk: an R tidy framework for modular transcriptomic data analysis.
- Published in:
- Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-020-02233-7
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- Publication type:
- Article
Expression of a Chimeric Antigen Receptor in Multiple Leukocyte Lineages in Transgenic Mice.
- Published in:
- PLoS ONE, 2015, v. 10, n. 10, p. 1, doi. 10.1371/journal.pone.0140543
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- Publication type:
- Article
Embryonic Lethality in Homozygous Human Her-2 Transgenic Mice Due to Disruption of the Pds5b Gene.
- Published in:
- PLoS ONE, 2015, v. 10, n. 9, p. 1, doi. 10.1371/journal.pone.0136817
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- Publication type:
- Article
Improving the Power of Structural Variation Detection by Augmenting the Reference.
- Published in:
- PLoS ONE, 2015, v. 10, n. 9, p. 1, doi. 10.1371/journal.pone.0136771
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- Publication type:
- Article
Bioinformatics Pipelines for Targeted Resequencing and Whole-Exome Sequencing of Human and Mouse Genomes: A Virtual Appliance Approach for Instant Deployment.
- Published in:
- PLoS ONE, 2014, v. 9, n. 4, p. 1, doi. 10.1371/journal.pone.0095217
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- Publication type:
- Article
Diversity of Conotoxin Gene Superfamilies in the Venomous Snail, <i>Conus victoriae</i>.
- Published in:
- PLoS ONE, 2014, v. 9, n. 2, p. 1, doi. 10.1371/journal.pone.0087648
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- Publication type:
- Article
Telomere Dynamics and Homeostasis in a Transmissible Cancer.
- Published in:
- PLoS ONE, 2012, v. 7, n. 8, p. 1, doi. 10.1371/journal.pone.0044085
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- Publication type:
- Article
Phylogenetic relationships, stage-specific expression and localisation of a unique family of inactive cysteine proteases in <italic>Sarcoptes scabiei</italic>.
- Published in:
- Parasites & Vectors, 2018, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13071-018-2862-0
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- Publication type:
- Article
Blood-Stage Plasmodium berghei Infection Generates a Potent, Specific CD8<sup>+</sup> T-Cell Response Despite Residence Largely in Cells Lacking MHC I Processing Machinery.
- Published in:
- Journal of Infectious Diseases, 2011, v. 204, n. 12, p. 1989, doi. 10.1093/infdis/jir656
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- Publication type:
- Article
Identification and analysis of divergent immune gene families within the Tasmanian devil genome.
- Published in:
- BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/s12864-015-2206-9
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- Publication type:
- Article
Evolutionary analyses of the major variant surface antigen-encoding genes reveal population structure of Plasmodium falciparum within and between continents.
- Published in:
- PLoS Genetics, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pgen.1009269
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- Publication type:
- Article
Comprehensive evaluation and characterisation of short read general-purpose structural variant calling software.
- Published in:
- Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-019-11146-4
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- Publication type:
- Article
A Limited Role for Gene Duplications in the Evolution of Platypus Venom.
- Published in:
- Molecular Biology & Evolution, 2012, v. 29, n. 1, p. 167, doi. 10.1093/molbev/msr180
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- Publication type:
- Article
A newly discovered protein export machine in malaria parasites.
- Published in:
- Nature, 2009, v. 459, n. 7249, p. 945, doi. 10.1038/nature08104
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- Publication type:
- Article
Synthetic Epigenetic Reprogramming of Mesenchymal to Epithelial States Using the CRISPR/dCas9 Platform in Triple Negative Breast Cancer.
- Published in:
- Advanced Science, 2023, v. 10, n. 22, p. 1, doi. 10.1002/advs.202301802
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- Publication type:
- Article
First Description of the Composition and the Functional Capabilities of the Skin Microbial Community Accompanying Severe Scabies Infestation in Humans.
- Published in:
- Microorganisms, 2021, v. 9, n. 5, p. 907, doi. 10.3390/microorganisms9050907
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- Publication type:
- Article
A 4-cyano-3-methylisoquinoline inhibitor of Plasmodium falciparum growth targets the sodium efflux pump PfATP4.
- Published in:
- Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-46500-5
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- Publication type:
- Article
Single‐cell RNA sequencing captures patient‐level heterogeneity and associated molecular phenotypes in breast cancer pleural effusions.
- Published in:
- Clinical & Translational Medicine, 2023, v. 13, n. 9, p. 1, doi. 10.1002/ctm2.1356
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- Publication type:
- Article
Two of a kind: transmissible Schwann cell cancers in the endangered Tasmanian devil (Sarcophilus harrisii).
- Published in:
- Cellular & Molecular Life Sciences, 2020, v. 77, n. 9, p. 1847, doi. 10.1007/s00018-019-03259-2
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- Publication type:
- Article
A systematic review of computational methods for designing efficient guides for CRISPR DNA base editor systems.
- Published in:
- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad205
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- Publication type:
- Article
IMGT/HighV QUEST paradigm for T cell receptor IMGT clonotype diversity and next generation repertoire immunoprofiling.
- Published in:
- Nature Communications, 2013, v. 4, n. 9, p. 2333, doi. 10.1038/ncomms3333
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- Publication type:
- Article
Disruption of metazoan gene regulatory networks in cancer alters the balance of co-expression between genes of unicellular and multicellular origins.
- Published in:
- Genome Biology, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s13059-024-03247-1
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- Publication type:
- Article
Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development.
- Published in:
- Genome Biology, 2011, v. 12, n. 8, p. 2, doi. 10.1186/gb-2011-12-8-r81
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- Publication type:
- Article
How the evolution of multicellularity set the stage for cancer.
- Published in:
- 2018
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- Publication type:
- journal article