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Analysis and prediction of protein β-sheet structures by a combinatorial approach.
- Published in:
- Nature, 1980, v. 285, n. 5764, p. 378, doi. 10.1038/285378a0
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- Publication type:
- Article
IGSF10 mutations dysregulate gonadotropin-releasing hormone neuronal migration resulting in delayed puberty.
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- EMBO Molecular Medicine, 2016, v. 8, n. 6, p. 626, doi. 10.15252/emmm.201606250
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- Publication type:
- Article
AMBIENT: Active Modules for Bipartite Networks - using high-throughput transcriptomic data to dissect metabolic response.
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- BMC Systems Biology, 2013, v. 7, n. 1, p. 1, doi. 10.1186/1752-0509-7-26
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- Publication type:
- Article
Structure of an XRCC1 BRCT domain: a new protein-protein interaction module.
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- EMBO Journal, 1998, v. 17, n. 21, p. 6404, doi. 10.1093/emboj/17.21.6404
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- Publication type:
- Article
Prediction of protein structure from amino acid sequence.
- Published in:
- Nature, 1978, v. 271, n. 5640, p. 15, doi. 10.1038/271015a0
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- Publication type:
- Article
Missense3D-DB web catalogue: an atom-based analysis and repository of 4M human protein-coding genetic variants.
- Published in:
- Human Genetics, 2021, v. 140, n. 5, p. 805, doi. 10.1007/s00439-020-02246-z
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- Publication type:
- Article
A polygenic biomarker to identify patients with severe hypercholesterolemia of polygenic origin.
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- Molecular Genetics & Genomic Medicine, 2020, v. 8, n. 6, p. 1, doi. 10.1002/mgg3.1248
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- Publication type:
- Article
k-SLAM: accurate and ultra-fast taxonomic classification and gene identification for large metagenomic data sets.
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- Nucleic Acids Research, 2017, v. 45, n. 4, p. 1649, doi. 10.1093/nar/gkw1248
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- Publication type:
- Article
CombFunc: predicting protein function using heterogeneous data sources.
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- Nucleic Acids Research, 2012, v. 40, p. W466, doi. 10.1093/nar/gks489
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- Publication type:
- Article
3DLigandSite: predicting ligand-binding sites using similar structures.
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- Nucleic Acids Research, 2010, v. 38, n. suppl_2, p. W469, doi. 10.1093/nar/gkq406
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- Publication type:
- Article
Accurate determination of solvation free energies of neutral organic compounds from first principles.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-28041-0
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- Publication type:
- Article
Learning in continuous action space for developing high dimensional potential energy models.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-021-27849-6
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- Publication type:
- Article
The SARS-CoV-2 infections in Thailand: Analysis of spike mutations complemented by protein structure insights.
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- Songklanakarin Journal of Science & Technology, 2022, v. 44, n. 5, p. 1201
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- Publication type:
- Article
Genetic variation in SCN10A influences cardiac conduction.
- Published in:
- Nature Genetics, 2010, v. 42, n. 2, p. 149, doi. 10.1038/ng.516
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- Publication type:
- Article
Genome-wide association study identifies variants in TMPRSS6 associated with hemoglobin levels.
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- Nature Genetics, 2009, v. 41, n. 11, p. 1170, doi. 10.1038/ng.462
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- Publication type:
- Article
Focused Cardiac Ultrasound in Dyspnea of Unclear Etiology in the Emergency Department: Utility of the FLUID Score.
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- Journal of Ultrasound in Medicine, 2020, v. 39, n. 11, p. 2211, doi. 10.1002/jum.15332
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- Publication type:
- Article
The 4th meeting on the Critical Assessment of Predicted Interaction (CAPRI) held at the Mare Nostrum, Barcelona.
- Published in:
- Proteins, 2010, v. 78, n. 15, p. 3065, doi. 10.1002/prot.22801
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- Publication type:
- Article
Prediction of ligand binding sites using homologous structures and conservation at CASP8.
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- Proteins, 2009, v. 77, n. S9, p. 147, doi. 10.1002/prot.22513
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- Publication type:
- Article
Exploring the extremes of sequence/structure space with ensemble fold recognition in the program Phyre.
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- Proteins, 2008, v. 70, n. 3, p. 611, doi. 10.1002/prot.21688
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- Publication type:
- Article
A general approach for developing system-specific functions to score protein-ligand docked complexes using support vector inductive logic programming.
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- Proteins, 2007, v. 69, n. 4, p. 823, doi. 10.1002/prot.21782
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- Publication type:
- Article
Prediction of the conformation and geometry of loops in globular proteins: Testing ArchDB, a structural classification of loops.
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- Proteins, 2005, v. 60, n. 4, p. 746, doi. 10.1002/prot.20516
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- Publication type:
- Article
Protein-protein docking using 3D-Dock in rounds 3, 4, and 5 of CAPRI.
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- Proteins, 2005, v. 60, n. 2, p. 281, doi. 10.1002/prot.20571
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- Publication type:
- Article
Evaluation of the 3D-Dock protein docking suite in rounds 1 and 2 of the CAPRI blind trial.
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- Proteins, 2003, v. 52, n. 1, p. 74, doi. 10.1002/prot.10396
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- Publication type:
- Article
CAPRI: A Critical Assessment of PRedicted Interactions.
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- Proteins, 2003, v. 52, n. 1, p. 2, doi. 10.1002/prot.10381
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- Article
Modeling of protein interactions in genomes.
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- Proteins, 2002, v. 47, n. 4, p. 444, doi. 10.1002/prot.10112
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- Publication type:
- Article
Enhancement of protein modeling by human intervention in applying the automatic programs 3D-JIGSAW and 3D-PSSM.
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- Proteins, 2001, v. 45, n. S5, p. 39, doi. 10.1002/prot.1168
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- Publication type:
- Article
Use of pair potentials across protein interfaces in screening predicted docked complexes.
- Published in:
- Proteins, 1999, v. 35, n. 3, p. 364, doi. 10.1002/(SICI)1097-0134(19990515)35:3<364::AID-PROT11>3.0.CO;2-4
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- Publication type:
- Article
Model building by comparison at CASP3: Using expert knowledge and computer automation.
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- Proteins, 1999, v. 37, n. S3, p. 47, doi. 10.1002/(SICI)1097-0134(1999)37:3+<47::AID-PROT7>3.0.CO;2-F
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- Publication type:
- Article
CAFASP-1: Critical assessment of fully automated structure prediction methods.
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- Proteins, 1999, v. 37, n. S3, p. 209, doi. 10.1002/(SICI)1097-0134(1999)37:3+<209::AID-PROT27>3.0.CO;2-Y
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- Publication type:
- Article
Modelling repressor proteins docking to DNA.
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- Proteins, 1998, v. 33, n. 4, p. 535, doi. 10.1002/(SICI)1097-0134(19981201)33:4<535::AID-PROT6>3.0.CO;2-D
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- Publication type:
- Article
Model building by comparison: A combination of expert knowledge and computer automation.
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- Proteins, 1997, v. 29, n. S1, p. 59, doi. 10.1002/(SICI)1097-0134(1997)1+<59::AID-PROT9>3.0.CO;2-J
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- Publication type:
- Article
Prediction of electrostatic effects of engineering of protein charges.
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- Nature, 1987, v. 330, n. 6143, p. 86, doi. 10.1038/330086a0
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- Article
AIDS vaccine predictions.
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- Nature, 1987, v. 326, n. 6113, p. 549, doi. 10.1038/326549c0
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- Publication type:
- Article
Incorporating Virtual Reactions into a Logic-based Ligand-based Virtual Screening Method to Discover New Leads.
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- Molecular Informatics, 2015, v. 34, n. 9, p. 615, doi. 10.1002/minf.201400162
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- Publication type:
- Article
Integrating logic-based machine learning and virtual screening to discover new drugs.
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- 2012
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- Publication type:
- Abstract
AlloPred: prediction of allosteric pockets on proteins using normal mode perturbation analysis.
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- BMC Bioinformatics, 2015, v. 16, p. 1, doi. 10.1186/s12859-015-0771-1
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- Publication type:
- Article
Automated identification of protein-ligand interaction features using Inductive Logic Programming: a hexose binding case study.
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- 2012
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- Publication type:
- Case Study
Phylotranscriptomic Insights into the Diversification of Endothermic Thunnus Tunas.
- Published in:
- Molecular Biology & Evolution, 2019, v. 36, n. 1, p. 84, doi. 10.1093/molbev/msy198
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- Publication type:
- Article
ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology.
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- Plant Cell, 2017, v. 29, n. 8, p. 1806, doi. 10.1105/tpc.17.00073
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- Publication type:
- Article
Isolation of a small molecule inhibitor of DNA base excision repair.
- Published in:
- Nucleic Acids Research, 2005, v. 33, n. 15, p. 4711, doi. 10.1093/nar/gki781
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- Publication type:
- Article
ArchDB: automated protein loop classification as a tool for structural genomics.
- Published in:
- Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d185
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- Publication type:
- Article
3D‐GENOMICS: a database to compare structural and functional annotations of proteins between sequenced genomes.
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- Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d245
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- Publication type:
- Article
In‐Silico Device Performance Prediction of Cosensitizer Dye Pairs for Dye‐Sensitized Solar Cells.
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- Advanced Energy Materials, 2023, v. 13, n. 6, p. 1, doi. 10.1002/aenm.202203536
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- Publication type:
- Article
An approach to improving multiple alignments of protein sequences using predicted secondary structure.
- Published in:
- Protein Engineering, 2001, v. 14, n. 4, p. 227, doi. 10.1093/protein/14.4.227
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- Publication type:
- Article
A novel binding site in catalase is suggested by structural similarity to the calycin superfamily.
- Published in:
- Protein Engineering, 1996, v. 9, n. 2, p. 107, doi. 10.1093/protein/9.2.107
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- Publication type:
- Article
Sepsis-Induced Cardiomyopathy: a Comprehensive Review.
- Published in:
- Current Cardiology Reports, 2020, v. 22, n. 5, p. 1, doi. 10.1007/s11886-020-01277-2
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- Publication type:
- Article
Partial protein domains: evolutionary insights and bioinformatics challenges.
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- Genome Biology, 2015, v. 16, n. 1, p. 100, doi. 10.1186/s13059-015-0663-8
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- Publication type:
- Article
Support vector inductive logic programming outperforms the naive Bayes classifier and inductive logic programming for the classification of bioactive chemical compounds.
- Published in:
- Journal of Computer-Aided Molecular Design, 2007, v. 21, n. 5, p. 269, doi. 10.1007/s10822-007-9113-3
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- Publication type:
- Article
In Silico Analysis of the Small Molecule Content of Outer Membrane Vesicles Produced by Bacteroides thetaiotaomicron Indicates an Extensive Metabolic Link between Microbe and Host.
- Published in:
- Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.02440
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- Publication type:
- Article
Functional significance of mutations in the Snf2 domain of ATRX.
- Published in:
- Human Molecular Genetics, 2011, v. 20, n. 13, p. 2603, doi. 10.1093/hmg/ddr163
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- Publication type:
- Article