Found: 29
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Structural Thermokinetic Modelling.
- Published in:
- Metabolites (2218-1989), 2022, v. 12, n. 5, p. 434, doi. 10.3390/metabo12050434
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- Publication type:
- Article
Model Balancing: A Search for In-Vivo Kinetic Constants and Consistent Metabolic States.
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- Metabolites (2218-1989), 2021, v. 11, n. 11, p. 749, doi. 10.3390/metabo11110749
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- Publication type:
- Article
Spanning high-dimensional expression space using ribosome-binding site combinatorics.
- Published in:
- Nucleic Acids Research, 2013, v. 41, n. 9, p. e98, doi. 10.1093/nar/gkt151
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- Publication type:
- Article
A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology.
- Published in:
- Nature Biotechnology, 2008, v. 26, n. 10, p. 1155, doi. 10.1038/nbt1492
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- Publication type:
- Article
Systems biology standards—the community speaks.
- Published in:
- 2007
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- Publication type:
- Letter
Does mapping reveal correlation between gene expression and protein–protein interaction?
- Published in:
- Nature Genetics, 2003, v. 33, n. 1, p. 15, doi. 10.1038/ng0103-15
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- Publication type:
- Article
A comprehensive library of fluorescent transcriptional reporters for Escherichia coli.
- Published in:
- Nature Methods, 2006, v. 3, n. 8, p. 623, doi. 10.1038/nmeth895
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- Publication type:
- Article
Biochemical network models simplified by balanced truncation.
- Published in:
- FEBS Journal, 2005, v. 272, n. 16, p. 4034, doi. 10.1111/j.1742-4658.2005.04780.x
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- Publication type:
- Article
A neural-mechanistic hybrid approach improving the predictive power of genome-scale metabolic models.
- Published in:
- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-40380-0
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- Publication type:
- Article
Systematic Construction of Kinetic Models from Genome-Scale Metabolic Networks.
- Published in:
- PLoS ONE, 2013, v. 8, n. 11, p. 1, doi. 10.1371/journal.pone.0079195
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- Publication type:
- Article
Steady-State Metabolite Concentrations Reflect a Balance between Maximizing Enzyme Efficiency and Minimizing Total Metabolite Load.
- Published in:
- PLoS ONE, 2013, v. 8, n. 9, p. 1, doi. 10.1371/journal.pone.0075370
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- Publication type:
- Article
A Quantitative Study of the Hog1 MAPK Response to Fluctuating Osmotic Stress in Saccharomyces cerevisiae.
- Published in:
- PLoS ONE, 2010, v. 5, n. 3, p. 1, doi. 10.1371/journal.pone.0009522
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- Publication type:
- Article
Mathematical modeling of intracellular signaling pathways.
- Published in:
- BMC Neuroscience, 2006, v. 7, p. S10, doi. 10.1186/1471-2202-7-S1-S10
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- Publication type:
- Article
Retrieval, alignment, and clustering of computational models based on semantic annotations.
- Published in:
- Molecular Systems Biology, 2011, v. 7, n. 1, p. 1, doi. 10.1038/msb.2011.41
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- Publication type:
- Article
Pathway Thermodynamics Highlights Kinetic Obstacles in Central Metabolism.
- Published in:
- PLoS Computational Biology, 2014, v. 10, n. 2, p. 1, doi. 10.1371/journal.pcbi.1003483
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- Publication type:
- Article
Notions of similarity for systems biology models.
- Published in:
- Briefings in Bioinformatics, 2018, v. 19, n. 1, p. 77, doi. 10.1093/bib/bbw090
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- Publication type:
- Article
Mathematical properties of optimal fluxes in cellular reaction networks at balanced growth.
- Published in:
- PLoS Computational Biology, 2023, v. 19, n. 6, p. 1, doi. 10.1371/journal.pcbi.1011156
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- Publication type:
- Article
The Protein Cost of Metabolic Fluxes: Prediction from Enzymatic Rate Laws and Cost Minimization.
- Published in:
- PLoS Computational Biology, 2016, v. 12, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005167
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- Publication type:
- Article
Linear modes of gene expression determined by independent component analysis.
- Published in:
- Bioinformatics, 2002, v. 18, n. 1, p. 51, doi. 10.1093/bioinformatics/18.1.51
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- Publication type:
- Article
Integration of Enzyme Kinetic Data from Various Sources.
- Published in:
- In Silico Biology, 2007, v. 7, p. S73
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- Publication type:
- Article
A note on the kinetics of enzyme action: A decomposition that highlights thermodynamic effects.
- Published in:
- FEBS Letters, 2013, v. 587, n. 17, p. 2772, doi. 10.1016/j.febslet.2013.07.028
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- Publication type:
- Article
RBAtools: a programming interface for Resource Balance Analysis models.
- Published in:
- Bioinformatics Advances, 2023, v. 3, n. 1, p. 1, doi. 10.1093/bioadv/vbad056
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- Publication type:
- Article
Parameter balancing: consistent parameter sets for kinetic metabolic models.
- Published in:
- Bioinformatics, 2019, v. 35, n. 19, p. 3857, doi. 10.1093/bioinformatics/btz129
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- Publication type:
- Article
SBtab: a flexible table format for data exchange in systems biology.
- Published in:
- Bioinformatics, 2016, v. 32, n. 16, p. 2559, doi. 10.1093/bioinformatics/btw179
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- Publication type:
- Article
Modular rate laws for enzymatic reactions: thermodynamics, elasticities and implementation.
- Published in:
- Bioinformatics, 2010, v. 26, n. 12, p. 1528, doi. 10.1093/bioinformatics/btq141
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- Publication type:
- Article
Integrating quantitative proteomics and metabolomics with a genome-scale metabolic network model.
- Published in:
- Bioinformatics, 2010, v. 26, n. 12, p. i255, doi. 10.1093/bioinformatics/btq183
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- Publication type:
- Article
Annotation and merging of SBML models with semanticSBML.
- Published in:
- Bioinformatics, 2010, v. 26, n. 3, p. 421, doi. 10.1093/bioinformatics/btp642
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- Publication type:
- Article
Clb3-centered regulations are recurrent across distinct parameter regions in minimal autonomous cell cycle oscillator designs.
- Published in:
- NPJ Systems Biology & Applications, 2020, v. 6, n. 1, p. 1, doi. 10.1038/s41540-020-0125-0
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- Publication type:
- Article
Metabolic enzyme cost explains variable trade-offs between microbial growth rate and yield.
- Published in:
- PLoS Computational Biology, 2018, v. 14, n. 2, p. 1, doi. 10.1371/journal.pcbi.1006010
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- Publication type:
- Article