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- Title
A Search Tool for Identification and Analysis of Conserved Sequence Patterns in Saccharomyces spp. Orthologous Promoters.
- Authors
Kohli, Davinder K.; Srikanth, Chittur V.; Bachhawat, Anand K.
- Abstract
We describe a web-based resource to identify, search and analyze sequence patterns conserved in the multiple sequence alignments of orthologous promoters from closely related/distant Saccharomyces spp. The webtool interfaces with a database where conserved sequence patterns (greater than 4 bp) have been previously extracted from genome-wide promoter alignments, allowing one to carry out user-defined genome-wide searches for conserved sequences to assist in the discovery of novel promoter elements based on comparative genomics. The web-based server can be accessed at http://www2.imtech.res.in/anand/sacch_prom_pat.html.
- Subjects
NUCLEOTIDE sequence; SACCHAROMYCES; DATABASES; GENOMES; GENOMICS; MOLECULAR genetics
- Publication
In Silico Biology, 2004, Vol 4, Issue 4, p411
- ISSN
1386-6338
- Publication type
Article