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A physical map with yeast artificial chromosome (YAC) clones covering 63% of the 12 rice chromosomes.
Published in:
Genome, 2001, v. 44, n. 1, p. 32, doi. 10.1139/g00-076
By:
- Saji, Shoko;
- Umehara, Yosuke;
- Antonio, Baltazar A;
- Yamane, Hiroko;
- Tanoue, Hiroshi;
- Baba, Tomoya;
- Aoki, Hiroyoshi;
- Ishige, Naoko;
- Wu, Jianzhong;
- Koike, Kazuhiro;
- Matsumoto, Takashi;
- Sasaki, Takuji
Publication type:
Article
Identification of Likely Genes on Chromosome VI of Saccharomyces cerevisiae by Correlating Transcripts and Nucleotide Sequence Data.
Published in:
DNA Research, 1997, v. 4, n. 3, p. 205, doi. 10.1093/dnares/4.3.205
By:
- Baba, Tomoya;
- Isono, Katsumi
Publication type:
Article
Construction of a Contiguous 874-kb Sequence of the Escherichia coli-K12 Genome Corresponding to 50.0–68.8 min on the Linkage Map and Analysis of Its Sequence Features*.
Published in:
DNA Research, 1997, v. 4, n. 2, p. 91, doi. 10.1093/dnares/4.2.91
By:
- Yamamoto, Yoshihiro;
- Aiba, Hiroji;
- Baba, Tomoya;
- Hayashi, Kouji;
- Inada, Toshifumi;
- Isono, Katumi;
- Itoh, Takeshi;
- Kimura, Sigenobu;
- Kitagawa, Masanari;
- Makino, Kozo;
- Miki, Takeyoshi;
- Mitsuhashi, Nobutaka;
- Mizobuchi, Kiyoshi;
- Mori, Hirotada;
- Nakade, Shinsuke;
- Nakamura, Yoshikazu;
- Nashimoto, Hiroko;
- Oshima, Taku;
- Oyama, Satoshi;
- Saito, Noriko
Publication type:
Article
Construction of a Contiguous 874-kb Sequence of the Escherichia coli K-12 Genome Corresponding to the 50.0–68.8 min on the Linkage Map and Analysis of Its Sequence Features (Supplement).
Published in:
DNA Research, 1997, v. 4, n. 2, p. 169, doi. 10.1093/dnares/4.2.169
By:
- Yamamoto, Yoshihiro;
- Aiba, Hiroji;
- Baba, Tomoya;
- Hayashi, Kouji;
- Inada, Toshifumi;
- Isono, Katumi;
- Itoh, Takeshi;
- Kimura, Sigenobu;
- Kitagawa, Masanari;
- Makino, Kozo;
- Miki, Takeyoshi;
- Mitsuhashi, Nobutaka;
- Mizobuchi, Kiyoshi;
- Mori, Hirotada;
- Nakade, Shinsuke;
- Nakamura, Yoshikazu;
- Nashimoto, Hiroko;
- Oshima, Taku;
- Oyama, Satoshi;
- Saito, Noriko
Publication type:
Article
A 460-kb DNA Sequence of the Escherichia coli K-12 Genome Corresponding to the 40.1–50.0 min Region on the Linkage Map (Supplement).
Published in:
DNA Research, 1996, v. 3, n. 6, p. 441, doi. 10.1093/dnares/3.6.441
By:
- Itoh, Takeshi;
- Aiba, Hiroji;
- Baba, Tomoya;
- Hayashi, Kouji;
- Inada, Toshifumi;
- Isono, Katumi;
- Kasai, Hiroaki;
- Kimura, Shigenobu;
- Kitakawa, Madoka;
- Kitagawa, Masanari;
- Makino, Kozo;
- Miki, Takeyoshi;
- Mizobuchi, Kiyoshi;
- Mori, Hirotada;
- Mori, Tomoko;
- Motomura, Kouji;
- Nakade, Shinsuke;
- Nakamura, Yoshikazu;
- Nashimoto, Hiroko;
- Nishio, Yoshitaka
Publication type:
Article
A 570-kb DNA Sequence of the Escherichia coli K-12 Genome Corresponding to the 28.0–40.1 min Region on the Linkage Map (Supplement).
Published in:
DNA Research, 1996, v. 3, n. 6, p. 435, doi. 10.1093/dnares/3.6.435
By:
- Aiba, Hiroji;
- Baba, Tomoya;
- Hayashi, Kouji;
- Inada, Toshifumi;
- Isono, Katumi;
- Itoh, Takeshi;
- Kasai, Hiroaki;
- Kashimoto, Kaoru;
- Kimura, Shigenobu;
- Kitakawa, Madoka;
- Kitagawa, Masanari;
- Makino, Kozo;
- Miki, Takeyoshi;
- Mizobuchi, Kiyoshi;
- Mori, Hirotada;
- Mori, Tomoko;
- Motomura, Kouji;
- Nakade, Shinsuke;
- Nakamura, Yoshikazu;
- Nashimoto, Hiroko
Publication type:
Article
A 460-kb DNA Sequence of the Escherichia coli K-12 Genome Corresponding to the 40.1–50.0 min Region on the Linkage Map.
Published in:
DNA Research, 1996, v. 3, n. 6, p. 379, doi. 10.1093/dnares/3.6.379
By:
- Itoh, Takeshi;
- Aiba, Hiroji;
- Baba, Tomoya;
- Hayashi, Kouji;
- Inada, Toshifumi;
- Isono, Katumi;
- Kasai, Hiroaki;
- Kimura, Shigenobu;
- Kitakawa, Madoka;
- Kitagawa, Masanari;
- Makino, Kozo;
- Miki, Takeyoshi;
- Mizobuchi, Kiyoshi;
- Mori, Hirotada;
- Mori, Tomoko;
- Motomura, Kouji;
- Nakade, Shinsuke;
- Nakamura, Yoshikazu;
- Nashimoto, Hiroko;
- Nishio, Yoshitaka
Publication type:
Article
A 570-kb DNA Sequence of the Escherichia coli K-12 Genome Corresponding to the 28.0–40.1 min Region on the Linkage Map.
Published in:
DNA Research, 1996, v. 3, n. 6, p. 363, doi. 10.1093/dnares/3.6.363
By:
- Aiba, Hiroji;
- Baba, Tomoya;
- Hayashi, Kouji;
- Inada, Toshifumi;
- Isono, Katumi;
- Itoh, Takeshi;
- Kasai, Hiroaki;
- Kashimoto, Kaoru;
- Kimura, Shigenobu;
- Kitakawa, Madoka;
- Kitagawa, Masanari;
- Makino, Kozo;
- Miki, Takeyoshi;
- Mizobuchi, Kiyoshi;
- Mori, Hirotada;
- Mori, Tomoko;
- Motomura, Kouji;
- Nakade, Shinsuke;
- Nakamura, Yoshikazu;
- Nashimoto, Hiroko
Publication type:
Article
A 718-kb DNA Sequence of the Escherichia coli K-12 Genome Corresponding to the 12.7–28.0 min Region on the Linkage Map (Supplement).
Published in:
DNA Research, 1996, v. 3, n. 3, p. 211, doi. 10.1093/dnares/3.3.211
By:
- Oshima, Taku;
- Aiba, Hiroji;
- Baba, Tomoya;
- Fujita, Katsutoshi;
- Hayashi, Kouji;
- Honjo, Atsuko;
- Ikemoto, Keiichi;
- Inada, Toshifumi;
- Itoh, Takeshi;
- Kajihara, Miwako;
- Kanai, Kiyotaka;
- Kashimoto, Kaoru;
- Kimura, Shigenobu;
- Kitagawa, Masanari;
- Makino, Kouzou;
- Masuda, Shinji;
- Miki, Takeyoshi;
- Mizobuchi, Kiyoshi;
- Mori, Hirotada;
- Motomura, Kouji
Publication type:
Article
A 718-kb DNA Sequence of the Escherichia coli K-12 Genome Corresponding to the 12.7–28.0 min Region on the Linkage Map.
Published in:
DNA Research, 1996, v. 3, n. 3, p. 137, doi. 10.1093/dnares/3.3.137
By:
- Oshima, Taku;
- Aiba, Hiroji;
- Baba, Tomoya;
- Fujita, Katsutoshi;
- Hayashi, Kouji;
- Honjo, Atsuko;
- Ikemoto, Keiichi;
- Inada, Toshifumi;
- Itoh, Takeshi;
- Kajihara, Miwako;
- Kanai, Kiyotaka;
- Kashimoto, Kaoru;
- Kimura, Shigenobu;
- Kitagawa, Masanari;
- Makino, Kouzou;
- Masuda, Shinji;
- Miki, Takeyoshi;
- Mizobuchi, Kiyoshi;
- Mori, Hirotada;
- Motomura, Kouji
Publication type:
Article
Analysis of Escherichia coli anaplerotic metabolism and its regulation mechanisms from the metabolic responses to altered dilution rates and phosphoenolpyruvate carboxykinase knockout.
Published in:
Biotechnology & Bioengineering, 2003, v. 84, n. 2, p. 129, doi. 10.1002/bit.10692
By:
- Chen Yang;
- Qiang Hua;
- Tomoya Baba;
- Hirotada Mori
Publication type:
Article
Alkaline and Thermophilic Amylases of Industrial Use.
Published in:
Annals of the New York Academy of Sciences, 1996, v. 799, n. 1, p. 332, doi. 10.1111/j.1749-6632.1996.tb33222.x
By:
- SHINKE, RYU;
- AOKI, KENJI;
- MURAKAMI, SHUICHIRO;
- INOUE, TAKATO;
- BABA, TOMOYA
Publication type:
Article
Escherichia coli proteome chips for detecting protein-protein interactions.
Published in:
Proteomics, 2006, v. 6, n. 24, p. 6433, doi. 10.1002/pmic.200600341
By:
- Oishi, Yo;
- Yunomura, Shuichi;
- Kawahashi, Yuko;
- Doi, Nobuhide;
- Takashima, Hideaki;
- Baba, Tomoya;
- Mori, Hirotada;
- Yanagawa, Hiroshi
Publication type:
Article
Eukaryotic phylotypes in aquatic moss pillars inhabiting a freshwater lake in East Antarctica, based on 18S rRNA gene analysis.
Published in:
Polar Biology, 2012, v. 35, n. 10, p. 1495, doi. 10.1007/s00300-012-1188-1
By:
- Nakai, Ryosuke;
- Abe, Takashi;
- Baba, Tomoya;
- Imura, Satoshi;
- Kagoshima, Hiroshi;
- Kanda, Hiroshi;
- Kohara, Yuji;
- Koi, Akiko;
- Niki, Hironori;
- Yanagihara, Katsuhiko;
- Naganuma, Takeshi
Publication type:
Article
Diversity of RuBisCO gene responsible for CO fixation in an Antarctic moss pillar.
Published in:
Polar Biology, 2012, v. 35, n. 11, p. 1641, doi. 10.1007/s00300-012-1204-5
By:
- Nakai, Ryosuke;
- Abe, Takashi;
- Baba, Tomoya;
- Imura, Satoshi;
- Kagoshima, Hiroshi;
- Kanda, Hiroshi;
- Kohara, Yuji;
- Koi, Akiko;
- Niki, Hironori;
- Yanagihara, Katsuhiko;
- Naganuma, Takeshi
Publication type:
Article
Microflorae of aquatic moss pillars in a freshwater lake, East Antarctica, based on fatty acid and 16S rRNA gene analyses.
Published in:
Polar Biology, 2012, v. 35, n. 3, p. 425, doi. 10.1007/s00300-011-1090-2
By:
- Nakai, Ryosuke;
- Abe, Takashi;
- Baba, Tomoya;
- Imura, Satoshi;
- Kagoshima, Hiroshi;
- Kanda, Hiroshi;
- Kanekiyo, Atsuko;
- Kohara, Yuji;
- Koi, Akiko;
- Nakamura, Keiko;
- Narita, Takanori;
- Niki, Hironori;
- Yanagihara, Katsuhiko;
- Naganuma, Takeshi
Publication type:
Article
Ribosome binding proteins YhbH and YfiA have opposite functions during 100S formation in the stationary phase of Escherichia coli.
Published in:
Genes to Cells, 2005, v. 10, n. 12, p. 1103, doi. 10.1111/j.1365-2443.2005.00903.x
By:
- Ueta, Masami;
- Yoshida, Hideji;
- Wada, Chieko;
- Baba, Tomoya;
- Mori, Hirotada;
- Wada, Akira
Publication type:
Article
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection.
Published in:
Molecular Systems Biology, 2006, v. 2, n. 1, p. E1, doi. 10.1038/msb4100050
By:
- Baba, Tomoya;
- Ara, Takeshi;
- Hasegawa, Miki;
- Takai, Yuki;
- Okumura, Yoshiko;
- Baba, Miki;
- Datsenko, Kirill A;
- Tomita, Masaru;
- Wanner, Barry L;
- Mori, Hirotada
Publication type:
Article
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.
Published in:
Molecular Systems Biology, 2006, v. 2, n. 1, p. E1, doi. 10.1038/msb4100049
By:
- Hayashi, Koji;
- Morooka, Naoki;
- Yamamoto, Yoshihiro;
- Fujita, Katsutoshi;
- Isono, Katsumi;
- Choi, Sunju;
- Ohtsubo, Eiichi;
- Baba, Tomoya;
- Wanner, Barry L;
- Mori, Hirotada;
- Horiuchi, Takashi
Publication type:
Article
Antisense Expression of a Rice Sucrose Transporter OsSUT1 in Rice (Oryza sativa L.).
Published in:
Plant & Cell Physiology, 2001, v. 42, n. 10, p. 1181, doi. 10.1093/pcp/pce148
By:
- Ishimaru, Ken;
- Hirose, Tatsurou;
- Aoki, Naohiro;
- Takahashi, Sakiko;
- Ono, Kiyomi;
- Yamamoto, Shinichi;
- Wu, Jiangzhong;
- Saji, Shoko;
- Baba, Tomoya;
- Ugaki, Masashi;
- Matsumoto, Takashi;
- Ohsugi, Ryu
Publication type:
Article
High-throughput Fluorescence Labelling of Full-length cDNA Products Based on a Reconstituted Translation System.
Published in:
Journal of Biochemistry, 2007, v. 141, n. 1, p. 19, doi. 10.1093/jb/mvm003
By:
- Kawahashi, Yuko;
- Doi, Nobuhide;
- Oishi, Yo;
- Tsuda, Chizuru;
- Takashima, Hideaki;
- Baba, Tomoya;
- Mori, Hirotada;
- Ito, Takashi;
- Yanagawa, Hiroshi
Publication type:
Article
The genome sequence and structure of rice chromosome 1.
Published in:
Nature, 2002, v. 420, n. 6913, p. 312, doi. 10.1038/nature01184
By:
- Sasaki, Takuji;
- Matsumoto, Takashi;
- Yamamoto, Kimiko;
- Sakata, Katsumi;
- Baba, Tomoya;
- Katayose, Yuichi;
- Wu, Jianzhong;
- Niimura, Yoshihito;
- Cheng, Zhukuan;
- Nagamura, Yoshiaki;
- Antonio, Baltazar A.;
- Kanamori, Hiroyuki;
- Hosokawa, Satomi;
- Masukawa, Masatoshi;
- Arikawa, Koji;
- Chiden, Yoshino;
- Hayashi, Mika;
- Okamoto, Masako;
- Ando, Tsuyu;
- Aoki, Hiroyoshi
Publication type:
Article
Bronchial occlusion with endobronchial Watanabe spigots using a two‐scope technique for massive haemoptysis.
Published in:
2024
By:
- Baba, Tomoya;
- Ito, Takayasu;
- Sato, Yoshiki;
- Hayai, Shunsaku;
- Koyama, Junji;
- Nakamura, Shota;
- Tokuda, Yoshiyuki;
- Chen‐Yoshikawa, Toyofumi Fengshi;
- Ishii, Makoto
Publication type:
Case Study
Epidermal growth factor receptor mutation‐positive advanced lung adenocarcinoma presenting with acute respiratory failure diagnosed by thin bronchoscope through transnasal route under high‐concentration oxygen mask.
Published in:
2022
By:
- Ito, Takayasu;
- Makino, Yasushi;
- Mashimo, Shuko;
- Baba, Tomoya;
- Otsuki, Ryo;
- Yasui, Hirotoshi;
- Fukui, Yasutaka;
- Odate, Mitsuru;
- Arai, Yoshifumi;
- Okachi, Shotaro;
- Wakahara, Keiko;
- Hashimoto, Naozumi
Publication type:
Case Study
Evaluation of rRNA depletion methods for capturing the RNA virome from environmental surfaces.
Published in:
BMC Research Notes, 2023, v. 16, n. 1, p. 1, doi. 10.1186/s13104-023-06417-9
By:
- Shiwa, Yuh;
- Baba, Tomoya;
- Sierra, Maria A.;
- Kim, JangKeun;
- Mason, Christopher E.;
- Suzuki, Haruo
Publication type:
Article
Batch-Learning Self-Organizing Map Identifies Horizontal Gene Transfer Candidates and Their Origins in Entire Genomes.
Published in:
Frontiers in Microbiology, 2020, v. 11, p. 1, doi. 10.3389/fmicb.2020.01486
By:
- Abe, Takashi;
- Akazawa, Yu;
- Toyoda, Atsushi;
- Niki, Hironori;
- Baba, Tomoya
Publication type:
Article
Genome sequence and overview of Oligoflexus tunisiensis Shr3<sup>T</sup> in the eighth class Oligoflexia of the phylum Proteobacteria.
Published in:
Standards in Genomic Sciences, 2016, v. 11, p. 1, doi. 10.1186/s40793-016-0210-6
By:
- Ryosuke Nakai;
- Takatomo Fujisawa;
- Yasukazu Nakamura;
- Tomoya Baba;
- Miyuki Nishijima;
- Karray, Fatma;
- Sayadi, Sami;
- Hiroko Isoda;
- Takeshi Naganuma;
- Hironori Niki
Publication type:
Article
ENVIRONMENTAL DEPENDENCY OF GENE KNOCKOUTS ON PHENOTYPE MICROARRAY ANALYSIS IN ESCHERICHIA COLI.
Published in:
Journal of Bioinformatics & Computational Biology, 2010, v. 8, p. 83, doi. 10.1142/S021972001000521X
By:
- TOHSATO, YUKAKO;
- BABA, TOMOYA;
- MAZAKI, YUSAKU;
- ITO, MASAHIRO;
- WANNER, BARRY L.;
- MORI, HIROTADA
Publication type:
Article
Comparative Analysis of argK-tox Clusters and Their Flanking Regions in Phaseolotoxin-Producing Pseudomonas syringae Pathovars.
Published in:
Journal of Molecular Evolution, 2006, v. 63, n. 3, p. 401, doi. 10.1007/s00239-005-0271-4
By:
- Genka, Hiroyuki;
- Baba, Tomoya;
- Tsuda, Masataka;
- Kanaya, Shigehiko;
- Mori, Hirotada;
- Yoshida, Takanobu;
- Noguchi, Masako Tsujimoto;
- Tsuchiya, Kenichi;
- Sawada, Hiroyuki
Publication type:
Article

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