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- Title
Genomic characterization of soybean blotchy mosaic virus, a cytorhabdovirus from South Africa.
- Authors
Read, David A.; Strydom, Elrea; Slippers, Bernard; Steenkamp, Emma; Pietersen, Gerhard
- Abstract
Samples showing blotchy mottle symptoms were collected from soybeans in North-West province, South Africa. The assembly of high-throughput sequencing data from three samples yielded contigs of 13,426 to 13,435nt, which represent the first complete genome sequences of soybean blotchy mosaic virus (SbBMV). SbBMV shows a typical cytorhabdovirus gene organization (3′-N-P-P3-M-G-L-5'), with each putative gene product being most similar, but with only 49.1-71.1% sequence identity, to those of cucurbit cytorhabdovirus 1. Given the species demarcation thresholds for rhabdoviruses, SbBMV is thus a distinct member of the genus Cytorhabdovirus.
- Subjects
SOUTH Africa; NORTH-West (South Africa); SOYBEAN mosaic virus; WHOLE genome sequencing; NUCLEOTIDE sequencing; RHABDOVIRUSES
- Publication
Archives of Virology, 2022, Vol 167, Issue 11, p2359
- ISSN
0304-8608
- Publication type
Article
- DOI
10.1007/s00705-022-05526-3