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Tree species identity and diversity drive fungal richness and community composition along an elevational gradient in a Mediterranean ecosystem.
Published in:
Mycorrhiza, 2018, v. 28, n. 1, p. 39, doi. 10.1007/s00572-017-0806-8
By:
- Saitta, Alessandro;
- Anslan, Sten;
- Bahram, Mohammad;
- Brocca, Luca;
- Tedersoo, Leho
Publication type:
Article
Forewarned is forearmed: harmonized approaches for early detection of potentially invasive pests and pathogens in sentinel plantings.
Published in:
NeoBiota, 2019, n. 47, p. 95, doi. 10.3897/neobiota.47.34276
By:
- Morales-Rodríguez, Carmen;
- Anslan, Sten;
- Auger-Rozenberg, Marie-Anne;
- Augustin, Sylvie;
- Baranchikov, Yuri;
- Bellahirech, Amani;
- Burokienė, Daiva;
- Čepukoit, Dovilė;
- Çota, Ejup;
- Davydenko, Kateryna;
- Doğmuş Lehtijärvi, H. Tuğba;
- Drenkhan, Rein;
- Drenkhan, Tiia;
- Eschen, René;
- Franić, Iva;
- Glavendekić, Milka;
- de Groot, Maarten;
- Kacprzyk, Magdalena;
- Kenis, Marc;
- Kirichenko, Natalia
Publication type:
Article
The influence of tree genus, phylogeny, and richness on the specificity, rarity, and diversity of ectomycorrhizal fungi.
Published in:
Environmental Microbiology Reports, 2024, v. 16, n. 2, p. 1, doi. 10.1111/1758-2229.13253
By:
- Tedersoo, Leho;
- Drenkhan, Rein;
- Abarenkov, Kessy;
- Anslan, Sten;
- Bahram, Mohammad;
- Bitenieks, Kriss;
- Buegger, Franz;
- Gohar, Daniyal;
- Hagh‐Doust, Niloufar;
- Klavina, Darta;
- Makovskis, Kristaps;
- Zusevica, Austra;
- Pritsch, Karin;
- Padari, Allar;
- Põlme, Sergei;
- Rahimlou, Saleh;
- Rungis, Dainis;
- Mikryukov, Vladimir
Publication type:
Article
Towards PacBio‐based pan‐eukaryote metabarcoding using full‐length ITS sequences.
Published in:
Environmental Microbiology Reports, 2019, v. 11, n. 5, p. 659, doi. 10.1111/1758-2229.12776
By:
- Tedersoo, Leho;
- Anslan, Sten
Publication type:
Article
Newly designed 16S rRNA metabarcoding primers amplify diverse and novel archaeal taxa from the environment.
Published in:
Environmental Microbiology Reports, 2019, v. 11, n. 4, p. 487, doi. 10.1111/1758-2229.12684
By:
- Bahram, Mohammad;
- Anslan, Sten;
- Hildebrand, Falk;
- Bork, Peer;
- Tedersoo, Leho
Publication type:
Article
Global soil microbiomes: A new frontline of biome‐ecology research.
Published in:
Global Ecology & Biogeography, 2022, v. 31, n. 6, p. 1120, doi. 10.1111/geb.13487
By:
- Vasar, Martti;
- Davison, John;
- Sepp, Siim‐Kaarel;
- Mucina, Ladislav;
- Oja, Jane;
- Al‐Quraishy, Saleh;
- Anslan, Sten;
- Bahram, Mohammad;
- Bueno, C. Guillermo;
- Cantero, Juan José;
- Decocq, Guillaume;
- Fraser, Lauchlan;
- Hiiesalu, Inga;
- Hozzein, Wael N.;
- Koorem, Kadri;
- Meng, Yiming;
- Moora, Mari;
- Onipchenko, Vladimir;
- Öpik, Maarja;
- Pärtel, Meelis
Publication type:
Article
Structure and function of the soil microbiome underlying N<sub>2</sub>O emissions from global wetlands.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-29161-3
By:
- Bahram, Mohammad;
- Espenberg, Mikk;
- Pärn, Jaan;
- Lehtovirta-Morley, Laura;
- Anslan, Sten;
- Kasak, Kuno;
- Kõljalg, Urmas;
- Liira, Jaan;
- Maddison, Martin;
- Moora, Mari;
- Niinemets, Ülo;
- Öpik, Maarja;
- Pärtel, Meelis;
- Soosaar, Kaido;
- Zobel, Martin;
- Hildebrand, Falk;
- Tedersoo, Leho;
- Mander, Ülo
Publication type:
Article
The endangered northern bettong, Bettongia tropica, performs a unique and potentially irreplaceable dispersal function for ectomycorrhizal truffle fungi.
Published in:
Molecular Ecology, 2018, v. 27, n. 23, p. 4960, doi. 10.1111/mec.14916
By:
- Nuske, Susan J.;
- Anslan, Sten;
- Tedersoo, Leho;
- Bonner, Mark T. L.;
- Congdon, Brad C.;
- Abell, Sandra E.
Publication type:
Article
Reviews and syntheses: How do abiotic and biotic processes respond to climatic variations in the Nam Co catchment (Tibetan Plateau)?
Published in:
Biogeosciences, 2020, v. 17, n. 5, p. 1261, doi. 10.5194/bg-17-1261-2020
By:
- Anslan, Sten;
- Azizi Rad, Mina;
- Buckel, Johannes;
- Echeverria Galindo, Paula;
- Kai, Jinlei;
- Kang, Wengang;
- Keys, Laura;
- Maurischat, Philipp;
- Nieberding, Felix;
- Reinosch, Eike;
- Tang, Handuo;
- Tran, Tuong Vi;
- Wang, Yuyang;
- Schwalb, Antje
Publication type:
Article
Global patterns in endemicity and vulnerability of soil fungi.
Published in:
Global Change Biology, 2022, v. 28, n. 22, p. 6696, doi. 10.1111/gcb.16398
By:
- Tedersoo, Leho;
- Mikryukov, Vladimir;
- Zizka, Alexander;
- Bahram, Mohammad;
- Hagh‐Doust, Niloufar;
- Anslan, Sten;
- Prylutskyi, Oleh;
- Delgado‐Baquerizo, Manuel;
- Maestre, Fernando T.;
- Pärn, Jaan;
- Öpik, Maarja;
- Moora, Mari;
- Zobel, Martin;
- Espenberg, Mikk;
- Mander, Ülo;
- Khalid, Abdul Nasir;
- Corrales, Adriana;
- Agan, Ahto;
- Vasco‐Palacios, Aída‐M.;
- Saitta, Alessandro
Publication type:
Article
How, not if, is the question mycologists should be asking about DNA-based typification.
Published in:
MycoKeys, 2023, n. 96, p. 143, doi. 10.3897/mycokeys.96.102669
By:
- Nilsson, R. Henrik;
- Ryberg, Martin;
- Wurzbacher, Christian;
- Tedersoo, Leho;
- Anslan, Sten;
- Põlme, Sergei;
- Spirin, Viacheslav;
- Mikryukov, Vladimir;
- Svantesson, Sten;
- Hartmann, Martin;
- Lennartsdotter, Charlotte;
- Belford, Pauline;
- Khomich, Maryia;
- Retter, Alice;
- Corcoll, Natàlia;
- Gómez Martinez, Daniela;
- Jansson, Tobias;
- Ghobad-Nejhad, Masoomeh;
- Duong Vu;
- Sanchez-Garcia, Marisol
Publication type:
Article
Great differences in performance and outcome of high-throughput sequencing data analysis platforms for fungal metabarcoding.
Published in:
MycoKeys, 2018, n. 39, p. 29, doi. 10.3897/mycokeys.39.28109
By:
- Anslan, Sten;
- Nilsson, R. Henrik;
- Wurzbacher, Christian;
- Baldrian, Petr;
- Tedersoo, Leho;
- Bahram, Mohammad
Publication type:
Article
Genomics and metagenomics technologies to recover ribosomal DNA and single-copy genes from old fruit-body and ectomycorrhiza specimens.
Published in:
MycoKeys, 2016, n. 13, p. 1, doi. 10.3897/mycokeys.13.8140
By:
- Tedersoo, Leho;
- Liiv, Ingrid;
- Kivistik, Paula Ann;
- Anslan, Sten;
- Kõljalg, Urmas;
- Bahram, Mohammad
Publication type:
Article
High- throughput identification of non- marine Ostracoda from the Tibetan Plateau: Evaluating the success of various primers on sedimentary DNA samples.
Published in:
Environmental DNA, 2021, v. 3, n. 5, p. 982, doi. 10.1002/edn3.222
By:
- Galindo, Paula Echeverría;
- Anslan, Sten;
- Frenzel, Peter;
- Künzel, Sven;
- Vences, Miguel;
- Pérez, Liseth;
- Börner, Nicole;
- Kang, Wengang;
- Schwarz, Anja;
- Wang, Junbo;
- Peng, Ping;
- Zhu, Liping;
- Schwalb, Antje
Publication type:
Article
Metabarcoding of soil environmental DNA to estimate plant diversity globally.
Published in:
Frontiers in Plant Science, 2023, p. 1, doi. 10.3389/fpls.2023.1106617
By:
- Vasar, Martti;
- Davison, John;
- Moora, Mari;
- Sepp, Siim-Kaarel;
- Anslan, Sten;
- Al-Quraishy, Saleh;
- Bahram, Mohammad;
- Bueno, C. Guillermo;
- José Cantero, Juan;
- Chimbioputo Fabiano, Ezequiel;
- Decocq, Guillaume;
- Drenkhan, Rein;
- Fraser, Lauchlan;
- Oja, Jane;
- Garibay-Orijel, Roberto;
- Hiiesalu, Inga;
- Koorem, Kadri;
- Mucina, Ladislav;
- Öpik, Maarja;
- Põlme, Sergei
Publication type:
Article
Global diversity and distribution of nitrogen-fixing bacteria in the soil.
Published in:
Frontiers in Plant Science, 2023, v. 13, p. 01, doi. 10.3389/fpls.2023.1100235
By:
- Sepp, Siim-Kaarel;
- Vasar, Martti;
- Davison, John;
- Oja, Jane;
- Anslan, Sten;
- Al-Quraishy, Saleh;
- Bahram, Mohammad;
- Bueno, C. Guillermo;
- Cantero, Juan José;
- Chimbioputo Fabiano, Ezequiel;
- Decocq, Guillaume;
- Drenkhan, Rein;
- Fraser, Lauchlan;
- Garibay Oriel, Roberto;
- Hiiesalu, Inga;
- Koorem, Kadri;
- Kõljalg, Urmas;
- Moora, Mari;
- Mucina, Ladislav;
- Öpik, Maarja
Publication type:
Article
Effects of nitrogen deposition on carbon and nutrient cycling along a natural soil acidity gradient as revealed by metagenomics.
Published in:
New Phytologist, 2023, v. 238, n. 6, p. 2607, doi. 10.1111/nph.18897
By:
- Hagh‐Doust, Niloufar;
- Mikryukov, Vladimir;
- Anslan, Sten;
- Bahram, Mohammad;
- Puusepp, Rasmus;
- Dulya, Olesya;
- Tedersoo, Leho
Publication type:
Article
Temperature and pH define the realised niche space of arbuscular mycorrhizal fungi.
Published in:
New Phytologist, 2021, v. 231, n. 2, p. 763, doi. 10.1111/nph.17240
By:
- Davison, John;
- Moora, Mari;
- Semchenko, Marina;
- Adenan, Sakeenah Binte;
- Ahmed, Talaat;
- Akhmetzhanova, Asem A.;
- Alatalo, Juha M.;
- Al‐Quraishy, Saleh;
- Andriyanova, Elena;
- Anslan, Sten;
- Bahram, Mohammad;
- Batbaatar, Amgaa;
- Brown, Charlotte;
- Bueno, C. Guillermo;
- Cahill, James;
- Cantero, Juan José;
- Casper, Brenda B.;
- Cherosov, Mikhail;
- Chideh, Saida;
- Coelho, Ana P.
Publication type:
Article
Plant nutrient‐acquisition strategies drive topsoil microbiome structure and function.
Published in:
New Phytologist, 2020, v. 227, n. 4, p. 1189, doi. 10.1111/nph.16598
By:
- Bahram, Mohammad;
- Netherway, Tarquin;
- Hildebrand, Falk;
- Pritsch, Karin;
- Drenkhan, Rein;
- Loit, Kaire;
- Anslan, Sten;
- Bork, Peer;
- Tedersoo, Leho
Publication type:
Article
Highly comparable metabarcoding results from MGI-Tech and Illumina sequencing platforms.
Published in:
PeerJ, 2021, p. 1, doi. 10.7717/peerj.12254
By:
- Anslan, Sten;
- Mikryukov, Vladimir;
- Armolaitis, Kęstutis;
- Ankuda, Jelena;
- Lazdina, Dagnija;
- Makovskis, Kristaps;
- Vesterdal, Lars;
- Schmidt, Inger Kappel;
- Tedersoo, Leho
Publication type:
Article
Tree Species Richness and Neighborhood Effects on Ectomycorrhizal Fungal Richness and Community Structure in Boreal Forest.
Published in:
Frontiers in Microbiology, 2021, v. 11, p. N.PAG, doi. 10.3389/fmicb.2021.567961
By:
- Otsing, Eveli;
- Anslan, Sten;
- Ambrosio, Elia;
- Koricheva, Julia;
- Tedersoo, Leho
Publication type:
Article
Regional-Scale In-Depth Analysis of Soil Fungal Diversity Reveals Strong pH and Plant Species Effects in Northern Europe.
Published in:
Frontiers in Microbiology, 2020, v. 11, p. N.PAG, doi. 10.3389/fmicb.2020.01953
By:
- Tedersoo, Leho;
- Anslan, Sten;
- Bahram, Mohammad;
- Drenkhan, Rein;
- Pritsch, Karin;
- Buegger, Franz;
- Padari, Allar;
- Hagh-Doust, Niloufar;
- Mikryukov, Vladimir;
- Gohar, Daniyal;
- Amiri, Rasekh;
- Hiiesalu, Indrek;
- Lutter, Reimo;
- Rosenvald, Raul;
- Rähn, Elisabeth;
- Adamson, Kalev;
- Drenkhan, Tiia;
- Tullus, Hardi;
- Jürimaa, Katrin;
- Sibul, Ivar
Publication type:
Article
Best practices in metabarcoding of fungi: From experimental design to results.
Published in:
Molecular Ecology, 2022, v. 31, n. 10, p. 2769, doi. 10.1111/mec.16460
By:
- Tedersoo, Leho;
- Bahram, Mohammad;
- Zinger, Lucie;
- Nilsson, R. Henrik;
- Kennedy, Peter G.;
- Yang, Teng;
- Anslan, Sten;
- Mikryukov, Vladimir
Publication type:
Article
Microbiomes from feces vs. gut in tadpoles: distinct community compositions between substrates and preservation methods.
Published in:
Salamandra, 2021, v. 57, n. 1, p. 96
By:
- ANSLAN, STEN;
- HUAN LI;
- KÜNZEL, SVEN;
- VENCES, MIGUEL
Publication type:
Article
Reviews and syntheses: How do abiotic and biotic processes respond to climatic variations at the Nam Co catchment (Tibetan Plateau)?
Published in:
Biogeosciences Discussions, 2019, p. 1, doi. 10.5194/bg-2019-50
By:
- Anslan, Sten;
- Rad, Mina Azizi;
- Buckel, Johannes;
- Echeverria Galindo, Paula;
- Jinlei Kai;
- Wengang Kang;
- Keys, Laura;
- Maurischat, Philipp;
- Nieberding, Felix;
- Reinosch, Eike;
- Handuo Tang;
- Tuong Vi Tran;
- Yuyang Wang;
- Schwalb, Antje
Publication type:
Article
PacBio metabarcoding of Fungi and other eukaryotes: errors, biases and perspectives.
Published in:
New Phytologist, 2018, v. 217, n. 3, p. 1370, doi. 10.1111/nph.14776
By:
- Tedersoo, Leho;
- Tooming‐Klunderud, Ave;
- Anslan, Sten
Publication type:
Article
High‐throughput identification and diagnostics of pathogens and pests: Overview and practical recommendations.
Published in:
Molecular Ecology Resources, 2019, v. 19, n. 1, p. 47, doi. 10.1111/1755-0998.12959
By:
- Tedersoo, Leho;
- Anslan, Sten;
- Drenkhan, Rein;
- Morales‐Rodriguez, Carmen;
- Cleary, Michelle
Publication type:
Article
PipeCraft: Flexible open-source toolkit for bioinformatics analysis of custom high-throughput amplicon sequencing data.
Published in:
Molecular Ecology Resources, 2017, v. 17, n. 6, p. e234, doi. 10.1111/1755-0998.12692
By:
- Anslan, Sten;
- Bahram, Mohammad;
- Hiiesalu, Indrek;
- Tedersoo, Leho
Publication type:
Article
DNA‐metabarcoding supports trophic flexibility and reveals new prey species for the Galapagos sea lion.
Published in:
Ecology & Evolution (20457758), 2024, v. 14, n. 3, p. 1, doi. 10.1002/ece3.10921
By:
- Urquía, Diego O.;
- Anslan, Sten;
- Asadobay, Pacarina;
- Moreira‐Mendieta, Andrés;
- Vences, Miguel;
- Chaves, Jaime A.;
- Páez‐Rosas, Diego
Publication type:
Article
Advancing biodiversity assessments with environmental DNA: Long‐read technologies help reveal the drivers of Amazonian fungal diversity.
Published in:
Ecology & Evolution (20457758), 2020, v. 10, n. 14, p. 7509, doi. 10.1002/ece3.6477
By:
- Ritter, Camila D.;
- Dunthorn, Micah;
- Anslan, Sten;
- Lima, Vitor Xavier;
- Tedersoo, Leho;
- Nilsson, Rolf Henrik;
- Antonelli, Alexandre
Publication type:
Article
New records of fungal pathogens of invertebrates from endemic pine forests in Mexico.
Published in:
Check List, 2022, v. 18, n. 1, p. 67, doi. 10.15560/18.1.67
By:
- Casique-Valdés, Rebeca;
- Anslan, Sten;
- Galindo-García, Fernando;
- Sanchez-Peña, Sergio R.
Publication type:
Article

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