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Plasma adenosine deaminase-1 and -2 activities are lower at birth in Papua New Guinea than in The Gambia but converge over the first weeks of life.
Published in:
Frontiers in Immunology, 2024, p. 1, doi. 10.3389/fimmu.2024.1425349
By:
- Kouyate, Thomas S.;
- Nguyen, Athena N.;
- Plotkin, Alec L.;
- Ford, Rebeca;
- Idoko, Olubukola T.;
- Odumade, Oludare A.;
- Masiria, Geraldine;
- Jude, Joe;
- Diray-Arce, Joann;
- McEnaney, Kerry;
- Ozonoff, Al;
- Steen, Hanno;
- Kollmann, Tobias R.;
- Richmond, Peter C.;
- van den Biggelaar, Anita H. J.;
- Kampmann, Beate;
- Pomat, William;
- Levy, Ofer;
- Smolen, Kinga K.
Publication type:
Article
The Immune Signatures data resource, a compendium of systems vaccinology datasets.
Published in:
Scientific Data, 2022, v. 9, n. 1, p. 1, doi. 10.1038/s41597-022-01714-7
By:
- Diray-Arce, Joann;
- Miller, Helen E. R.;
- Henrich, Evan;
- Gerritsen, Bram;
- Mulè, Matthew P.;
- Fourati, Slim;
- Gygi, Jeremy;
- Hagan, Thomas;
- Tomalin, Lewis;
- Rychkov, Dmitry;
- Kazmin, Dmitri;
- Chawla, Daniel G.;
- Meng, Hailong;
- Dunn, Patrick;
- Campbell, John;
- The Human Immunology Project Consortium (HIPC);
- Deckhut-Augustine, Alison;
- Gottardo, Raphael;
- Haddad, Elias K.;
- Hafler, David A.
Publication type:
Article
Efficient t RNA degradation and quantification in Escherichia coli cell extract using R Nase-coated magnetic beads: A key step toward codon emancipation.
Published in:
Biotechnology Progress, 2017, v. 33, n. 5, p. 1401, doi. 10.1002/btpr.2511
By:
- Salehi, Amin S. M.;
- Smith, Mark T.;
- Schinn, Song‐Min;
- Hunt, Jeremy M.;
- Muhlestein, Christina;
- Diray‐Arce, Joann;
- Nielsen, Brent L.;
- Bundy, Bradley C.
Publication type:
Article
Reduced Steroid Metabolites Identify Infection-Prone Children in Two Independent Pre-Birth Cohorts.
Published in:
Metabolites (2218-1989), 2022, v. 12, n. 11, p. 1108, doi. 10.3390/metabo12111108
By:
- Prince, Nicole;
- Kim, Min;
- Kelly, Rachel S.;
- Diray-Arce, Joann;
- Bønnelykke, Klaus;
- Chawes, Bo L.;
- Huang, Mengna;
- Levy, Ofer;
- Litonjua, Augusto A.;
- Stokholm, Jakob;
- Wheelock, Craig E.;
- Bisgaard, Hans;
- Weiss, Scott T.;
- Lasky-Su, Jessica A.
Publication type:
Article
Integrative Metabolomics to Identify Molecular Signatures of Responses to Vaccines and Infections.
Published in:
Metabolites (2218-1989), 2020, v. 10, n. 12, p. 492, doi. 10.3390/metabo10120492
By:
- Diray-Arce, Joann;
- Conti, Maria Giulia;
- Petrova, Boryana;
- Kanarek, Naama;
- Angelidou, Asimenia;
- Levy, Ofer
Publication type:
Article
Adjuvant Effect of Bacille Calmette--Guérin on Hepatitis B Vaccine Immunogenicity in the Preterm and Term Newborn.
Published in:
Frontiers in Immunology, 2018, p. 1, doi. 10.3389/fimmu.2018.00029
By:
- Scheid, Annette;
- Borriello, Francesco;
- Pietrasanta, Carlo;
- Christou, Helen;
- Diray-Arce, Joann;
- Pettengill, Matthew A.;
- Joshi, Sweta;
- Li, Ning;
- Bergelson, Ilana;
- Kollmann, Tobias;
- Dowling, David J.;
- Levy, Ofer
Publication type:
Article
The Arabidopsis At1g30680 gene encodes a homologue to the phage T7 gp4 protein that has both DNA primase and DNA helicase activities.
Published in:
BMC Plant Biology, 2013, v. 13, n. 1, p. 1, doi. 10.1186/1471-2229-13-36
By:
- Diray-Arce, Joann;
- Bin Liu;
- Cupp, John D.;
- Hunt, Travis;
- Nielsen, Brent L.
Publication type:
Article
A cloud-based bioinformatic analytic infrastructure and Data Management Core for the Expanded Program on Immunization Consortium.
Published in:
Journal of Clinical & Translational Science, 2021, v. 5, n. 1, p. 1, doi. 10.1017/cts.2020.546
By:
- Vignolo, Sofia M.;
- Diray-Arce, Joann;
- McEnaney, Kerry;
- Rao, Shun;
- Shannon, Casey P.;
- Idoko, Olubukola T.;
- Cole, Fatoumata;
- Darboe, Alansana;
- Cessay, Fatoumatta;
- Ben-Othman, Rym;
- Tebbutt, Scott J.;
- Kampmann, Beate;
- Levy, Ofer;
- Ozonoff, Al
Publication type:
Article
Dynamic molecular changes during the first week of human life follow a robust developmental trajectory.
Published in:
Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-019-08794-x
By:
- Lee, Amy H.;
- Shannon, Casey P.;
- Amenyogbe, Nelly;
- Bennike, Tue B.;
- Diray-Arce, Joann;
- Idoko, Olubukola T.;
- Gill, Erin E.;
- Ben-Othman, Rym;
- Pomat, William S.;
- van Haren, Simon D.;
- Cao, Kim-Anh Lê;
- Cox, Momoudou;
- Darboe, Alansana;
- Falsafi, Reza;
- Ferrari, Davide;
- Harbeson, Daniel J.;
- He, Daniel;
- Bing, Cai;
- Hinshaw, Samuel J.;
- Ndure, Jorjoh
Publication type:
Article
Carbohydrate fatty acid monosulphate: oil-in-water adjuvant enhances SARS-CoV-2 RBD nanoparticle-induced immunogenicity and protection in mice.
Published in:
NPJ Vaccines, 2023, v. 8, n. 1, p. 1, doi. 10.1038/s41541-023-00610-4
By:
- Nanishi, Etsuro;
- Borriello, Francesco;
- Seo, Hyuk-Soo;
- O'Meara, Timothy R.;
- McGrath, Marisa E.;
- Saito, Yoshine;
- Chen, Jing;
- Diray-Arce, Joann;
- Song, Kijun;
- Xu, Andrew Z.;
- Barman, Soumik;
- Menon, Manisha;
- Dong, Danica;
- Caradonna, Timothy M.;
- Feldman, Jared;
- Hauser, Blake M.;
- Schmidt, Aaron G.;
- Baden, Lindsey R.;
- Ernst, Robert K.;
- Dillen, Carly
Publication type:
Article
Publisher Correction: Carbohydrate fatty acid monosulphate: oil-in-water adjuvant enhances SARS-CoV-2 RBD nanoparticle-induced immunogenicity and protection in mice.
Published in:
2023
By:
- Nanishi, Etsuro;
- Borriello, Francesco;
- Seo, Hyuk-Soo;
- O'Meara, Timothy R.;
- McGrath, Marisa E.;
- Saito, Yoshine;
- Chen, Jing;
- Diray-Arce, Joann;
- Song, Kijun;
- Xu, Andrew Z.;
- Barman, Soumik;
- Menon, Manisha;
- Dong, Danica;
- Caradonna, Timothy M.;
- Feldman, Jared;
- Hauser, Blake M.;
- Schmidt, Aaron G.;
- Baden, Lindsey R.;
- Ernst, Robert K.;
- Dillen, Carly
Publication type:
Correction Notice
Carbohydrate fatty acid monosulphate: oil-in-water adjuvant enhances SARS-CoV-2 RBD nanoparticle-induced immunogenicity and protection in mice.
Published in:
NPJ Vaccines, 2023, v. 8, n. 1, p. 1, doi. 10.1038/s41541-023-00610-4
By:
- Nanishi, Etsuro;
- Borriello, Francesco;
- Seo, Hyuk-Soo;
- O'Meara, Timothy R.;
- McGrath, Marisa E.;
- Saito, Yoshine;
- Chen, Jing;
- Diray-Arce, Joann;
- Song, Kijun;
- Xu, Andrew Z.;
- Barman, Soumik;
- Menon, Manisha;
- Dong, Danica;
- Caradonna, Timothy M.;
- Feldman, Jared;
- Hauser, Blake M.;
- Schmidt, Aaron G.;
- Baden, Lindsey R.;
- Ernst, Robert K.;
- Dillen, Carly
Publication type:
Article
Identification and evolutionary characterization of salt-responsive transcription factors in the succulent halophyte Suaeda fruticosa.
Published in:
PLoS ONE, 2019, v. 14, n. 9, p. 1, doi. 10.1371/journal.pone.0222940
By:
- Diray-Arce, Joann;
- Knowles, Alisa;
- Suvorov, Anton;
- O’Brien, Jacob;
- Hansen, Collin;
- Bybee, Seth M.;
- Gul, Bilquees;
- Khan, M. Ajmal;
- Nielsen, Brent L.
Publication type:
Article
Immunophenotyping assessment in a COVID-19 cohort (IMPACC): A prospective longitudinal study.
Published in:
Science Immunology, 2021, v. 6, n. 62, p. 1, doi. 10.1126/sciimmunol.abf3733
By:
- Rouphael, Nadine;
- Maecker, Holden;
- Montgomery, Ruth R.;
- Diray-Arce, Joann;
- Kleinstein, Steven H.;
- Altman, Matthew C.;
- Bosinger, Steven E.;
- Eckalbar, Walter;
- Guan, Leying;
- Hough, Catherine L.;
- Krammer, Florian;
- Langelier, Charles;
- Levy, Ofer;
- McEnaney, Kerry;
- Peters, Bjoern;
- Rahman, Adeeb;
- Rajan, Jayant V.;
- Sigelman, Steven;
- Steen, Hanno;
- van Bakel, Harm
Publication type:
Article
Human Newborn Monocytes Demonstrate Distinct BCG-Induced Primary and Trained Innate Cytokine Production and Metabolic Activation In Vitro.
Published in:
Frontiers in Immunology, 2021, v. 12, p. 1, doi. 10.3389/fimmu.2021.674334
By:
- Angelidou, Asimenia;
- Diray-Arce, Joann;
- Conti, Maria-Giulia;
- Netea, Mihai G.;
- Blok, Bastiaan A.;
- Liu, Mark;
- Sanchez-Schmitz, Guzman;
- Ozonoff, Al;
- van Haren, Simon D.;
- Levy, Ofer
Publication type:
Article
Respiratory infection- and asthma-prone, low vaccine responder children demonstrate distinct mononuclear cell DNA methylation pathways.
Published in:
Clinical Epigenetics, 2024, v. 16, n. 1, p. 1, doi. 10.1186/s13148-024-01703-0
By:
- Martino, David;
- Schultz, Nikki;
- Kaur, Ravinder;
- van Haren, Simon D.;
- Kresoje, Nina;
- Hoch, Annmarie;
- Diray-Arce, Joann;
- Su, Jessica Lasky;
- Levy, Ofer;
- Pichichero, Michael
Publication type:
Article
Breastfeeding and Neonatal Age Influence Neutrophil‐Driven Ontogeny of Blood Cell Populations in the First Week of Human Life.
Published in:
Journal of Immunology Research, 2024, v. 2024, p. 1, doi. 10.1155/2024/1117796
By:
- Montante, Sebastiano;
- Ben-Othman, Rym;
- Amenyogbe, Nelly;
- Angelidou, Asimenia;
- van den Biggelaar, Anita;
- Cai, Bing;
- Chen, Yixuan;
- Darboe, Alansana;
- Diray-Arce, Joann;
- Ford, Rebecca;
- Idoko, Olubukola;
- Lee, Amy;
- Lo, Mandy;
- McEnaney, Kerry;
- Malek, Mehrnoush;
- Martino, David;
- Masiria, Geraldine;
- Odumade, Oludare A.;
- Pomat, William;
- Shannon, Casey
Publication type:
Article
Plasma adenosine deaminase-1 and -2 activities are lower at birth in Papua New Guinea than in The Gambia but converge over the first weeks of life.
Published in:
Frontiers in Immunology, 2024, p. 1, doi. 10.3389/fimmu.2024.1425349
By:
- Kouyate, Thomas S.;
- Nguyen, Athena N.;
- Plotkin, Alec L.;
- Ford, Rebeca;
- Idoko, Olubukola T.;
- Odumade, Oludare A.;
- Masiria, Geraldine;
- Jude, Joe;
- Diray-Arce, Joann;
- McEnaney, Kerry;
- Ozonoff, Al;
- Steen, Hanno;
- Kollmann, Tobias R.;
- Richmond, Peter C.;
- van den Biggelaar, Anita H. J.;
- Kampmann, Beate;
- Pomat, William;
- Levy, Ofer;
- Smolen, Kinga K.
Publication type:
Article
Plasma adenosine deaminase-1 and -2 activities are lower at birth in Papua New Guinea than in The Gambia but converge over the first weeks of life.
Published in:
Frontiers in Immunology, 2024, p. 1, doi. 10.3389/fimmu.2024.1425349
By:
- Kouyate, Thomas S.;
- Nguyen, Athena N.;
- Plotkin, Alec L.;
- Ford, Rebeca;
- Idoko, Olubukola T.;
- Odumade, Oludare A.;
- Masiria, Geraldine;
- Jude, Joe;
- Diray-Arce, Joann;
- McEnaney, Kerry;
- Ozonoff, Al;
- Steen, Hanno;
- Kollmann, Tobias R.;
- Richmond, Peter C.;
- van den Biggelaar, Anita H. J.;
- Kampmann, Beate;
- Pomat, William;
- Levy, Ofer;
- Smolen, Kinga K.
Publication type:
Article
An aluminum hydroxide:CpG adjuvant enhances protection elicited by a SARS-CoV-2 receptor binding domain vaccine in aged mice.
Published in:
Science Translational Medicine, 2022, v. 14, n. 629, p. 1, doi. 10.1126/scitranslmed.abj5305
By:
- Nanishi, Etsuro;
- Borriello, Francesco;
- O'Meara, Timothy R.;
- McGrath, Marisa E.;
- Saito, Yoshine;
- Haupt, Robert E.;
- Seo, Hyuk-Soo;
- van Haren, Simon D.;
- Cavazzoni, Cecilia B.;
- Brook, Byron;
- Barman, Soumik;
- Chen, Jing;
- Diray-Arce, Joann;
- Doss-Gollin, Simon;
- De Leon, Maria;
- Prevost-Reilly, Alejandra;
- Chew, Katherine;
- Menon, Manisha;
- Song, Kijun;
- Xu, Andrew Z.
Publication type:
Article
Nucleotide, Phospholipid, and Kynurenine Metabolites Are Robustly Associated with COVID-19 Severity and Time of Plasma Sample Collection in a Prospective Cohort Study.
Published in:
International Journal of Molecular Sciences, 2024, v. 25, n. 1, p. 346, doi. 10.3390/ijms25010346
By:
- Chatelaine, Haley A. S.;
- Chen, Yulu;
- Braisted, John;
- Chu, Su H.;
- Chen, Qingwen;
- Stav, Meryl;
- Begum, Sofina;
- Diray-Arce, Joann;
- Sanjak, Jaleal;
- Huang, Mengna;
- Lasky-Su, Jessica;
- Mathé, Ewy A.
Publication type:
Article
The Implication of Sphingolipids in Viral Infections.
Published in:
International Journal of Molecular Sciences, 2023, v. 24, n. 24, p. 17303, doi. 10.3390/ijms242417303
By:
- Thomas, Sanya;
- Samuel, Stephen Varghese;
- Hoch, Annmarie;
- Syphurs, Caitlin;
- Diray-Arce, Joann
Publication type:
Article
Transcriptome assembly, profiling and differential gene expression analysis of the halophyte Suaeda fruticosa provides insights into salt tolerance.
Published in:
BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1553-x
By:
- Diray-Arce, Joann;
- Clement, Mark;
- Gul, Bilquees;
- Khan, M. Ajmal;
- Nielsen, Brent L.
Publication type:
Article
BCG as a Case Study for Precision Vaccine Development: Lessons From Vaccine Heterogeneity, Trained Immunity, and Immune Ontogeny.
Published in:
Frontiers in Microbiology, 2020, p. 1, doi. 10.3389/fmicb.2020.00332
By:
- Angelidou, Asimenia;
- Diray-Arce, Joann;
- Conti, Maria Giulia;
- Smolen, Kinga K.;
- van Haren, Simon Daniël;
- Dowling, David J.;
- Husson, Robert N.;
- Levy, Ofer
Publication type:
Article

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