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Activation of α7 Nicotinic Acetylcholine Receptors Prevents Monosodium Iodoacetate-Induced Osteoarthritis in Rats.
Published in:
Cellular Physiology & Biochemistry (Karger AG), 2015, v. 35, n. 2, p. 627, doi. 10.1159/000369724
By:
- Liu, Yuan;
- Wu, Dongying;
- Song, Fanglong;
- Zhu, Chenlei;
- Hui, Yujian;
- Zhu, Qingcheng;
- Wu, Jie;
- Fan, Weimin;
- Hu, Jun
Publication type:
Article
OPN Polymorphism is Associated with the Susceptibility to Cervical Spondylotic Myelopathy and its Outcome After Anterior Cervical Corpectomy and Fusion.
Published in:
Cellular Physiology & Biochemistry (Karger AG), 2014, v. 34, n. 2, p. 565, doi. 10.1159/000363023
By:
- Wu, Jibin;
- Wu, Dongying;
- Guo, Kaijin;
- Yuan, Feng;
- Ran, Bo
Publication type:
Article
Author Correction: A genomic catalog of Earth's microbiomes.
Published in:
2021
By:
- Nayfach, Stephen;
- Roux, Simon;
- Seshadri, Rekha;
- Udwary, Daniel;
- Varghese, Neha;
- Schulz, Frederik;
- Wu, Dongying;
- Paez-Espino, David;
- Chen, I-Min;
- Huntemann, Marcel;
- Palaniappan, Krishna;
- Ladau, Joshua;
- Mukherjee, Supratim;
- Reddy, T. B. K.;
- Nielsen, Torben;
- Kirton, Edward;
- Faria, José P.;
- Edirisinghe, Janaka N.;
- Henry, Christopher S.;
- Jungbluth, Sean P.
Publication type:
Correction Notice
Publisher Correction: A genomic catalog of Earth's microbiomes.
Published in:
2021
By:
- Nayfach, Stephen;
- Roux, Simon;
- Seshadri, Rekha;
- Udwary, Daniel;
- Varghese, Neha;
- Schulz, Frederik;
- Wu, Dongying;
- Paez-Espino, David;
- Chen, I-Min;
- Huntemann, Marcel;
- Palaniappan, Krishna;
- Ladau, Joshua;
- Mukherjee, Supratim;
- Reddy, T. B. K.;
- Nielsen, Torben;
- Kirton, Edward;
- Faria, José P.;
- Edirisinghe, Janaka N.;
- Henry, Christopher S.;
- Jungbluth, Sean P.
Publication type:
Correction Notice
A genomic catalog of Earth's microbiomes.
Published in:
Nature Biotechnology, 2021, v. 39, n. 4, p. 499, doi. 10.1038/s41587-020-0718-6
By:
- Nayfach, Stephen;
- Roux, Simon;
- Seshadri, Rekha;
- Udwary, Daniel;
- Varghese, Neha;
- Schulz, Frederik;
- Wu, Dongying;
- Paez-Espino, David;
- Chen, I-Min;
- Huntemann, Marcel;
- Palaniappan, Krishna;
- Ladau, Joshua;
- Mukherjee, Supratim;
- Reddy, T. B. K.;
- Nielsen, Torben;
- Kirton, Edward;
- Faria, José P.;
- Edirisinghe, Janaka N.;
- Henry, Christopher S.;
- Jungbluth, Sean P.
Publication type:
Article
The effect of large channel-based foraminoplasty on lumbar biomechanics in percutaneous endoscopic discectomy: a finite element analysis.
Published in:
Journal of Orthopaedic Surgery & Research, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13018-024-04870-1
By:
- Sun, Wei;
- Li, Duohua;
- Zhao, Sicong;
- Fu, Hao;
- Tian, Jiayu;
- Zhang, Feng;
- Feng, Hu;
- Wu, Dongying
Publication type:
Article
CD49f Acts as an Inflammation Sensor to Regulate Differentiation, Adhesion, and Migration of Human Mesenchymal Stem Cells.
Published in:
Stem Cells, 2015, v. 33, n. 9, p. 2798, doi. 10.1002/stem.2063
By:
- Yang, Zhigang;
- Dong, Ping;
- Fu, Xin;
- Li, Qiuchen;
- Ma, Shize;
- Wu, Dongying;
- Kang, Ning;
- Liu, Xia;
- Yan, Li;
- Xiao, Ran
Publication type:
Article
Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups.
Published in:
PLoS ONE, 2013, v. 8, n. 10, p. 1, doi. 10.1371/journal.pone.0077033
By:
- Wu, Dongying;
- Jospin, Guillaume;
- Eisen, Jonathan A.
Publication type:
Article
Stalking the Fourth Domain in Metagenomic Data: Searching for, Discovering, and Interpreting Novel, Deep Branches in Marker Gene Phylogenetic Trees.
Published in:
PLoS ONE, 2011, v. 6, n. 3, p. 1, doi. 10.1371/journal.pone.0018011
By:
- Wu, Dongying;
- Wu, Martin;
- Halpern, Aaron;
- Rusch, Douglas B.;
- Yooseph, Shibu;
- Frazier, Marvin;
- Venter, J. Craig;
- Eisen, Jonathan A.
Publication type:
Article
One Bacterial Cell, One Complete Genome.
Published in:
PLoS ONE, 2010, v. 5, n. 4, p. 1, doi. 10.1371/journal.pone.0010314
By:
- Woyke, Tanja;
- Tighe, Damon;
- Mavromatis, Konstantinos;
- Clum, Alicia;
- Copeland, Alex;
- Schackwitz, Wendy;
- Lapidus, Alla;
- Dongying Wu;
- McCutcheon, John P.;
- McDonald, Bradon R.;
- Moran, Nancy A.;
- Bristow, James;
- Jan-Fang Cheng
Publication type:
Article
Complete Genome Sequence of the Aerobic CO-Oxidizing Thermophile Thermomicrobium roseum.
Published in:
PLoS ONE, 2009, v. 4, n. 1, p. 1, doi. 10.1371/journal.pone.0004207
By:
- Dongying Wu;
- Raymond, Jason;
- Wu, Martin;
- Chatterji, Sourav;
- Qinghu Ren;
- Graham, Joel E.;
- Bryant, Donald A.;
- Robb, Frank;
- Colman, Albert;
- Tallon, Luke J.;
- Badger, Jonathan H.;
- Madupu, Ramana;
- Ward, Naomi L.;
- Eisen, Jonathan A.
Publication type:
Article
An Automated Phylogenetic Tree-Based Small Subunit rRNA Taxonomy and Alignment Pipeline (STAP).
Published in:
PLoS ONE, 2008, v. 3, n. 7, p. 1, doi. 10.1371/journal.pone.0002566
By:
- Dongying Wu;
- Hartman, Amber;
- Ward, Naomi;
- Eisen, Jonathan A.
Publication type:
Article
A map of WW domain family interactions.
Published in:
Proteomics, 2004, v. 4, n. 3, p. 643, doi. 10.1002/pmic.200300632
By:
- Hai Hu;
- John Columbus;
- Yi Zhang;
- Dongying Wu;
- Lubing Lian;
- Song Yang;
- Jennifer Goodwin;
- Christine Luczak;
- Mark Carter;
- Lin Chen;
- Michael James;
- Roger Davis;
- Marius Sudol;
- John Rodwell;
- Juan J. Herrero
Publication type:
Article
Sifting through genomes with iterative-sequence clustering produces a large, phylogenetically diverse protein-family resource.
Published in:
BMC Bioinformatics, 2012, v. 13, n. 1, p. 264, doi. 10.1186/1471-2105-13-264
By:
- Sharpton, Thomas J.;
- Jospin, Guillaume;
- Dongying Wu;
- I. Langille, Morgan G.;
- Pollard, Katherine S.;
- Eisen, Jonathan A.
Publication type:
Article
Ginsenoside Rb1 prevents interleukin-1 beta induced inflammation and apoptosis in human articular chondrocytes.
Published in:
International Orthopaedics, 2013, v. 37, n. 10, p. 2065, doi. 10.1007/s00264-013-1990-6
By:
- Cheng, Wendan;
- Wu, Dongying;
- Zuo, Qiang;
- Wang, Zhen;
- Fan, Weimin
Publication type:
Article
A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea.
Published in:
Nature, 2009, v. 462, n. 7276, p. 1056, doi. 10.1038/nature08656
By:
- Dongying Wu;
- Hugenholtz, Philip;
- Mavromatis, Konstantinos;
- Pukall, Rüdiger;
- Dalin, Eileen;
- Ivanova, Natalia N.;
- Kunin, Victor;
- Goodwin, Lynne;
- Wu, Martin;
- Tindall, Brian J.;
- Hooper, Sean D.;
- Pati, Amrita;
- Lykidis, Athanasios;
- Spring, Stefan;
- Anderson, Iain J.;
- D'haeseleer, Patrik;
- Zemla, Adam;
- Singer, Mitchell;
- Lapidus, Alla;
- Nolan, Matt
Publication type:
Article
Failure analysis of thin‐film four‐junction inverted metamorphic solar cells.
Published in:
Progress in Photovoltaics, 2021, v. 29, n. 2, p. 181, doi. 10.1002/pip.3355
By:
- Long, Junhua;
- Wu, Dongying;
- Huang, Xinping;
- Ye, Sai;
- Li, Xuefei;
- Ji, Lian;
- Sun, Qiangjian;
- Song, Minghui;
- Xing, Zhiwei;
- Lu, Shulong
Publication type:
Article
Extraordinary phylogenetic diversity and metabolic versatility in aquifer sediment.
Published in:
Nature Communications, 2013, v. 4, n. 8, p. 2120, doi. 10.1038/ncomms3120
By:
- Castelle, Cindy J.;
- Hug, Laura A.;
- Wrighton, Kelly C.;
- Thomas, Brian C.;
- Williams, Kenneth H.;
- Wu, Dongying;
- Tringe, Susannah G.;
- Singer, Steven W.;
- Eisen, Jonathan A.;
- Banfield, Jillian F.
Publication type:
Article
Complete reannotation of the Arabidopsis genome: methods, tools, protocols and the final release.
Published in:
BMC Biology, 2005, v. 3, p. 1, doi. 10.1186/1741-7007-3-7
By:
- Haas, Brian J.;
- Wortman, Jennifer R.;
- Ronning, Catherine M.;
- Hannick, Linda I.;
- Smith Jr., Roger K.;
- Maiti, Rama;
- Chan, Agnes P.;
- Chunhui Yu;
- Farzad, Maryam;
- Dongying Wu;
- White, Owen;
- Town, Christopher D.
Publication type:
Article
Protection of ginsenoside Rg1 on chondrocyte from IL-1β-induced mitochondria-activated apoptosis through PI3K/Akt signaling.
Published in:
Molecular & Cellular Biochemistry, 2014, v. 392, n. 1/2, p. 249, doi. 10.1007/s11010-014-2035-1
By:
- Huang, Yumin;
- Wu, Dongying;
- Fan, Weimin
Publication type:
Article
Macronuclear Genome Sequence of the Ciliate Tetrahymena thermophila, a Model Eukaryote.
Published in:
PLoS Biology, 2006, v. 4, n. 9, p. 1620, doi. 10.1371/journal.pbio.0040286
By:
- Eisen, Jonathan A.;
- Coyne, Robert S.;
- Wu, Martin;
- Wu, Dongying;
- Thiagarajan, Mathangi;
- Wortman, Jennifer R.;
- Badger, Jonathan H.;
- Ren, Qinghu;
- Amedeo, Paolo;
- Jones, Kristie M.;
- Tallon, Luke J.;
- Delcher, Arthur L.;
- Salzberg, Steven L.;
- Silva, Joana C.;
- Haas, Brian J.;
- Majoros, William H.;
- Farzad, Maryam;
- Carlton, Jane M.;
- Smith, Jr., Roger K.;
- Garg, Jyoti
Publication type:
Article
Metabolic Complementarity and Genomics of the Dual Bacterial Symbiosis of Sharpshooters.
Published in:
PLoS Biology, 2006, v. 4, n. 6, p. e188, doi. 10.1371/journal.pbio.0040188
By:
- Wu, Dongying;
- Daugherty, Sean C.;
- van Aken, Susan E.;
- Pai, Grace H.;
- Watkins, Kisha L.;
- Khouri, Hoda;
- Tallon, Luke J.;
- Zaborsky, Jennifer M.;
- Dunbar, Helen E.;
- Tran, Phat L.;
- Moran, Nancy A.;
- Eisen, Jonathan A.
Publication type:
Article
IMG/M data management and analysis system v.7: content updates and new features.
Published in:
Nucleic Acids Research, 2023, v. 51, n. D1, p. D723, doi. 10.1093/nar/gkac976
By:
- Chen, I-Min A;
- Chu, Ken;
- Palaniappan, Krishnaveni;
- Ratner, Anna;
- Huang, Jinghua;
- Huntemann, Marcel;
- Hajek, Patrick;
- Ritter, Stephan J;
- Webb, Cody;
- Wu, Dongying;
- Varghese, Neha J;
- Reddy, T B K;
- Mukherjee, Supratim;
- Ovchinnikova, Galina;
- Nolan, Matt;
- Seshadri, Rekha;
- Roux, Simon;
- Visel, Axel;
- Woyke, Tanja;
- Eloe-Fadrosh, Emiley A
Publication type:
Article
Phylogenetically Driven Sequencing of Extremely Halophilic Archaea Reveals Strategies for Static and Dynamic Osmo-response.
Published in:
PLoS Genetics, 2014, v. 10, n. 11, p. 1, doi. 10.1371/journal.pgen.1004784
By:
- Becker, Erin A.;
- Seitzer, Phillip M.;
- Tritt, Andrew;
- Larsen, David;
- Krusor, Megan;
- Yao, Andrew I.;
- Wu, Dongying;
- Madern, Dominique;
- Eisen, Jonathan A.;
- Darling, Aaron E.;
- Facciotti, Marc T.
Publication type:
Article
Adaptations to Submarine Hydrothermal Environments Exemplified by the Genome of Nautilia profundicola.
Published in:
PLoS Genetics, 2009, v. 5, n. 2, p. 1, doi. 10.1371/journal.pgen.1000362
By:
- Campbell, Barbara J.;
- Smith, Julie L.;
- Hanson, Thomas E.;
- Klotz, Martin G.;
- Stein, Lisa Y.;
- Lee, Charles K.;
- Dongying Wu;
- Robinson, Jeffrey M.;
- Khouri, Hoda M.;
- Eisen, Jonathan A.;
- Cary, S. Craig
Publication type:
Article
Reproductive toxicity in adult male rats following intra-articular injection of cobalt-chromium nanoparticles.
Published in:
2013
By:
- Wang, Zhen;
- Chen, Zhefeng;
- Zuo, Qiang;
- Song, Fanglong;
- Wu, Dongying;
- Cheng, Wendan;
- Fan, Weimin
Publication type:
Journal Article
Reproductive toxicity in adult male rats following intra-articular injection of cobalt–chromium nanoparticles.
Published in:
Journal of Orthopaedic Science, 2013, v. 18, n. 6, p. 1020, doi. 10.1007/s00776-013-0458-2
By:
- Wang, Zhen;
- Chen, Zhefeng;
- Zuo, Qiang;
- Song, Fanglong;
- Wu, Dongying;
- Cheng, Wendan;
- Fan, Weimin
Publication type:
Article
The genome of the intracellular bacterium of the coastal bivalve, Solemya velum: a blueprint for thriving in and out of symbiosis.
Published in:
BMC Genomics, 2014, v. 15, n. 1, p. 924, doi. 10.1186/1471-2164-15-924
By:
- Dmytrenko, Oleg;
- Russell, Shelbi L.;
- Loo, Wesley T.;
- Fontanez, Kristina M.;
- Li Liao;
- Roeselers, Guus;
- Sharma, Raghav;
- Stewart, Frank J.;
- Newton, Irene L. G.;
- Woyke, Tanja;
- Dongying Wu;
- Lang, Jenna Morgan;
- Eisen, Jonathan A.;
- Cavanaugh, Colleen M.
Publication type:
Article
Fosmid library end sequencing reveals a rarely known genome structure of marine shrimp Penaeus monodon.
Published in:
BMC Genomics, 2011, v. 12, n. 1, p. 242, doi. 10.1186/1471-2164-12-242
By:
- Shiao-Wei Huang;
- You-Yu Lin;
- En-Min You;
- Tze-Tze Liu;
- Hung-Yu Shu;
- Keh-Ming Wu;
- Shih-Feng Tsai;
- Chu-Fang Lo;
- Guang-Hsiung Kou;
- Gwo-Chin Ma;
- Ming Chen;
- Dongying Wu;
- Takashi Aoki;
- Ikuo Hirono;
- Hon-Tsen Yu
Publication type:
Article
Chondroprotective Effects of Ginsenoside Rg1 in Human Osteoarthritis Chondrocytes and a Rat Model of Anterior Cruciate Ligament Transection.
Published in:
Nutrients, 2017, v. 9, n. 3, p. 263, doi. 10.3390/nu9030263
By:
- Wendan Cheng;
- Juehua Jing;
- Zhen Wang;
- Dongying Wu;
- Yumin Huang
Publication type:
Article

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