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Host genetic factors related to innate immunity, environmental sensing and cellular functions are associated with human skin microbiota.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-33906-5
By:
- Moitinho-Silva, Lucas;
- Degenhardt, Frauke;
- Rodriguez, Elke;
- Emmert, Hila;
- Juzenas, Simonas;
- Möbus, Lena;
- Uellendahl-Werth, Florian;
- Sander, Nicole;
- Baurecht, Hansjörg;
- Tittmann, Lukas;
- Lieb, Wolfgang;
- Gieger, Christian;
- Peters, Annette;
- Ellinghaus, David;
- Bang, Corinna;
- Franke, Andre;
- Weidinger, Stephan;
- Rühlemann, Malte Christoph
Publication type:
Article
genome-wide association study in autoimmune neurological syndromes with anti-GAD65 autoantibodies.
Published in:
Brain: A Journal of Neurology, 2023, v. 146, n. 3, p. 977, doi. 10.1093/brain/awac119
By:
- Strippel, Christine;
- Herrera-Rivero, Marisol;
- Wendorff, Mareike;
- Tietz, Anja K;
- Degenhardt, Frauke;
- Witten, Anika;
- Schroeter, Christina;
- Nelke, Christopher;
- Golombeck, Kristin S;
- Madlener, Marie;
- Rüber, Theodor;
- Ernst, Leon;
- Racz, Attila;
- Baumgartner, Tobias;
- Widman, Guido;
- Doppler, Kathrin;
- Thaler, Franziska;
- Siebenbrodt, Kai;
- Dik, Andre;
- Kerin, Constanze
Publication type:
Article
Genome-wide epistasis study highlights genetic interactions influencing severity of COVID-19.
Published in:
European Journal of Epidemiology, 2023, v. 38, n. 8, p. 883, doi. 10.1007/s10654-023-01020-5
By:
- Lin, Shiqi;
- Gao, Xingjian;
- Degenhardt, Frauke;
- Qian, Yu;
- Liu, Tianzi;
- Ramon, Xavier Farre;
- Hadi, Syed Sibte;
- Romero-Gómez, Manuel;
- Fernández, Javier;
- Albillos, Agustín;
- Ferret, Maria Buti;
- Bujanda, Luis;
- Julià, Antonio;
- de Cid, Rafael;
- Asselta, Rosanna;
- Franke, Andre;
- Liu, Fan
Publication type:
Article
Sparse Modeling Reveals miRNA Signatures for Diagnostics of Inflammatory Bowel Disease.
Published in:
PLoS ONE, 2015, v. 10, n. 10, p. 1, doi. 10.1371/journal.pone.0140155
By:
- Hübenthal, Matthias;
- Hemmrich-Stanisak, Georg;
- Degenhardt, Frauke;
- Szymczak, Silke;
- Du, Zhipei;
- Elsharawy, Abdou;
- Keller, Andreas;
- Schreiber, Stefan;
- Franke, Andre
Publication type:
Article
Unbiased Characterization of Peptide-HLA Class II Interactions Based on Large-Scale Peptide Microarrays; Assessment of the Impact on HLA Class II Ligand and Epitope Prediction.
Published in:
Frontiers in Immunology, 2020, v. 11, p. N.PAG, doi. 10.3389/fimmu.2020.01705
By:
- Wendorff, Mareike;
- Garcia Alvarez, Heli M.;
- Østerbye, Thomas;
- ElAbd, Hesham;
- Rosati, Elisa;
- Degenhardt, Frauke;
- Buus, Søren;
- Franke, Andre;
- Nielsen, Morten
Publication type:
Article
Low-Frequency Blood Group Antigens in Switzerland.
Published in:
Transfusion Medicine & Hemotherapy, 2018, v. 45, n. 4, p. 239, doi. 10.1159/000490714
By:
- Gassner, Christoph;
- Degenhardt, Frauke;
- Meyer, Stefan;
- Vollmert, Caren;
- Trost, Nadine;
- Neuenschwander, Kathrin;
- Merki, Yvonne;
- Portmann, Claudia;
- Sigurdardottir, Sonja;
- Zorbas, antigoni;
- Engström, Charlotte;
- Gottschalk, Jochen;
- amar el Dusouqui, Soraya;
- Waldvogel-abramovski, Sophie;
- Rigal, Emmanuel;
- Tissot, Jean-Daniel;
- Tinguely, Caroline;
- Mauvais, Simon M.;
- Sarraj, amira;
- Bessero, Daniel
Publication type:
Article
A cross-disease meta-GWAS identifies four new susceptibility loci shared between systemic sclerosis and Crohn's disease.
Published in:
Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-58741-w
By:
- González-Serna, David;
- Ochoa, Eguzkine;
- López-Isac, Elena;
- Julià, Antonio;
- Degenhardt, Frauke;
- Ortego-Centeno, Norberto;
- Radstake, Timothy R. D. J.;
- Franke, Andre;
- Marsal, Sara;
- Mayes, Maureen D.;
- Martín, Javier;
- Márquez, Ana;
- Scleroderma Genetic Consortium;
- Assassi, Shervin;
- Zhou, Xiaodong;
- Tan, Filemon K.;
- Arnett, Frank C.;
- Reveille, John D.;
- Gorlova, Olga;
- Chen, Wei V.
Publication type:
Article
Mechanisms by which the cystic fibrosis transmembrane conductance regulator may influence SARS‐CoV‐2 infection and COVID‐19 disease severity.
Published in:
FASEB Journal, 2023, v. 37, n. 11, p. 1, doi. 10.1096/fj.202300077R
By:
- Tedbury, Philip R.;
- Manfredi, Candela;
- Degenhardt, Frauke;
- Conway, Joseph;
- Horwath, Michael C.;
- McCracken, Courtney;
- Sorscher, Adam J.;
- Moreau, Sandy;
- Wright, Christine;
- Edwards, Carolina;
- Brewer, Jo;
- Guarner, Jeannette;
- de Wit, Emmie;
- Williamson, Brandi N.;
- Suthar, Mehul S.;
- Ong, Yee T.;
- Roback, John D.;
- Alter, David N.;
- Holter, Jan C.;
- Karlsen, Tom H.
Publication type:
Article
Evaluation of variable selection methods for random forests and omics data sets.
Published in:
Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 492, doi. 10.1093/bib/bbx124
By:
- Degenhardt, Frauke;
- Seifert, Stephan;
- Szymczak, Silke
Publication type:
Article
Erratum: A protein-truncating R179X variant in RNF186 confers protection against ulcerative colitis.
Published in:
Nature Communications, 2016, v. 7, n. 9, p. 12869, doi. 10.1038/ncomms12869
By:
- Rivas, Manuel A.;
- Graham, Daniel;
- Sulem, Patrick;
- Stevens, Christine;
- Desch, A. Nicole;
- Goyette, Philippe;
- Gudbjartsson, Daniel;
- Jonsdottir, Ingileif;
- Thorsteinsdottir, Unnur;
- Degenhardt, Frauke;
- Mucha, Sören;
- Kurki, Mitja I.;
- Li, Dalin;
- D'Amato, Mauro;
- Annese, Vito;
- Vermeire, Severine;
- Weersma, Rinse K.;
- Halfvarson, Jonas;
- Paavola-Sakki, Paulina;
- Lappalainen, Maarit
Publication type:
Article
A protein-truncating R179X variant in RNF186 confers protection against ulcerative colitis.
Published in:
Nature Communications, 2016, v. 7, n. 8, p. 12342, doi. 10.1038/ncomms12342
By:
- Rivas, Manuel A.;
- Graham, Daniel;
- Sulem, Patrick;
- Stevens, Christine;
- Desch, A. Nicole;
- Goyette, Philippe;
- Gudbjartsson, Daniel;
- Jonsdottir, Ingileif;
- Thorsteinsdottir, Unnur;
- Degenhardt, Frauke;
- Mucha, Sören;
- Kurki, Mitja I.;
- Li, Dalin;
- D'Amato, Mauro;
- Annese, Vito;
- Vermeire, Severine;
- Weersma, Rinse K.;
- Halfvarson, Jonas;
- Paavola-Sakki, Paulina;
- Lappalainen, Maarit
Publication type:
Article
Detailed stratified GWAS analysis for severe COVID-19 in four European populations.
Published in:
Human Molecular Genetics, 2022, v. 31, n. 23, p. 3945, doi. 10.1093/hmg/ddac158
By:
- Degenhardt, Frauke;
- Ellinghaus, David;
- Juzenas, Simonas;
- Lerga-Jaso, Jon;
- Wendorff, Mareike;
- Maya-Miles, Douglas;
- Uellendahl-Werth, Florian;
- ElAbd, Hesham;
- Rühlemann, Malte C;
- Arora, Jatin;
- Özer, Onur;
- Lenning, Ole Bernt;
- Myhre, Ronny;
- Vadla, May Sissel;
- Wacker, Eike M;
- Wienbrandt, Lars;
- Ortiz, Aaron Blandino;
- Salazar, Adolfo de;
- Chercoles, Adolfo Garrido;
- Palom, Adriana
Publication type:
Article
Construction and benchmarking of a multi-ethnic reference panel for the imputation of HLA class I and II alleles.
Published in:
Human Molecular Genetics, 2019, v. 28, n. 12, p. 2078, doi. 10.1093/hmg/ddy443
By:
- Degenhardt, Frauke;
- Wendorff, Mareike;
- Wittig, Michael;
- Ellinghaus, Eva;
- Datta, Lisa W;
- Schembri, John;
- Ng, Siew C;
- Rosati, Elisa;
- Hübenthal, Matthias;
- Ellinghaus, David;
- Jung, Eun Suk;
- Lieb, Wolfgang;
- Abedian, Shifteh;
- Malekzadeh, Reza;
- Cheon, Jae Hee;
- Ellul, Pierre;
- Sood, Ajit;
- Midha, Vandana;
- Thelma, B K;
- Wong, Sunny H
Publication type:
Article
Genome-wide association study of serum coenzyme Q<sub>10</sub> levels identifies susceptibility loci linked to neuronal diseases.
Published in:
Human Molecular Genetics, 2016, v. 25, n. 13, p. 2881, doi. 10.1093/hmg/ddw134
By:
- Degenhardt, Frauke;
- Niklowitz, Petra;
- Szymczak, Silke;
- Jacobs, Gunnar;
- Lieb, Wolfgang;
- Menke, Thomas;
- Laudes, Matthias;
- Esko, Tõnu;
- Weidinger, Stephan;
- Franke, Andre;
- Döring, Frank;
- Onur, Simone
Publication type:
Article
18th International HLA and Immunogenetics Workshop: Report on the SNP‐HLA Reference Consortium (SHLARC) component.
Published in:
HLA: Immune Response Genetics, 2024, v. 103, n. 1, p. 1, doi. 10.1111/tan.15293
By:
- Silva, Nayane S. B.;
- Bourguiba‐Hachemi, Sonia;
- Douillard, Venceslas;
- Koskela, Satu;
- Degenhardt, Frauke;
- Clancy, Jonna;
- Limou, Sophie;
- Meyer, Diogo;
- Masotti, Cibele;
- Knorst, Stefan;
- Naslavsky, Michel Satya;
- Franke, Andre;
- Castelli, Erick C.;
- Gourraud, Pierre‐Antoine;
- Vince, Nicolas
Publication type:
Article
Correction: Serum anti-glycan-antibodies in relatives of patients with inflammatory bowel disease.
Published in:
2018
By:
- Kamm, Florian;
- Strauch, Ulrike;
- Degenhardt, Frauke;
- Lopez, Rocio;
- Kunst, Claudia;
- Rogler, Gerhard;
- Franke, Andre;
- Klebl, Frank;
- Rieder, Florian
Publication type:
Correction Notice
Detailed Transcriptional Landscape of Peripheral Blood Points to Increased Neutrophil Activation in Treatment-Naïve Inflammatory Bowel Disease.
Published in:
Journal of Crohn's & Colitis, 2022, v. 16, n. 7, p. 1097, doi. 10.1093/ecco-jcc/jjac003
By:
- Juzenas, Simonas;
- Hübenthal, Matthias;
- Lindqvist, Carl Mårten;
- Kruse, Robert;
- Steiert, Tim Alexander;
- Degenhardt, Frauke;
- Schulte, Dominik;
- Nikolaus, Susanna;
- Zeissig, Sebastian;
- Bergemalm, Daniel;
- Almer, Sven;
- Hjortswang, Henrik;
- Bresso, Francesca;
- Group, SIC IBD Working;
- Strüning, Nina;
- Kupcinskas, Juozas;
- Keller, Andreas;
- Lieb, Wolfgang;
- Rosenstiel, Philip;
- Schreiber, Stefan
Publication type:
Article
Serum anti-glycan-antibodies in relatives of patients with inflammatory bowel disease.
Published in:
PLoS ONE, 2018, v. 13, n. 3, p. 1, doi. 10.1371/journal.pone.0194222
By:
- Kamm, Florian;
- Strauch, Ulrike;
- Degenhardt, Frauke;
- Lopez, Rocio;
- Kunst, Claudia;
- Rogler, Gerhard;
- Franke, Andre;
- Klebl, Frank;
- Rieders, Florian
Publication type:
Article
Hypothalamic Inflammation in Human Obesity Is Mediated by Environmental and Genetic Factors.
Published in:
2017
By:
- Kreutzer, Carina;
- Peters, Sönke;
- Schulte, Dominik M.;
- Fangmann, Daniela;
- Türk, Kathrin;
- Wolff, Stephan;
- van Eimeren, Thilo;
- Ahrens, Markus;
- Beckmann, Jan;
- Schafmayer, Clemens;
- Becker, Thomas;
- Kerby, Tina;
- Rohr, Axel;
- Riedel, Christian;
- Heinsen, Femke-Anouska;
- Degenhardt, Frauke;
- Franke, Andre;
- Rosenstiel, Philip;
- Zubek, Nana;
- Henning, Christian
Publication type:
journal article
Immunopeptidomics toolkit library (IPTK): a python-based modular toolbox for analyzing immunopeptidomics data.
Published in:
BMC Bioinformatics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12859-021-04315-0
By:
- ElAbd, Hesham;
- Degenhardt, Frauke;
- Koudelka, Tomas;
- Kamps, Ann-Kristin;
- Tholey, Andreas;
- Bacher, Petra;
- Lenz, Tobias L.;
- Franke, Andre;
- Wendorff, Mareike
Publication type:
Article

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