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Discovery of optimal cell type classification marker genes from single cell RNA sequencing data.
Published in:
BMC Methods, 2024, v. 1, n. 1, p. 1, doi. 10.1186/s44330-024-00015-2
By:
- Liu, Angela;
- Peng, Beverly;
- Pankajam, Ajith V.;
- Duong, Thu Elizabeth;
- Pryhuber, Gloria;
- Scheuermann, Richard H.;
- Zhang, Yun
Publication type:
Article
Proteomic Analysis of Single Mammalian Cells Enabled by Microfluidic Nanodroplet Sample Preparation and Ultrasensitive NanoLC‐MS.
Published in:
Angewandte Chemie, 2018, v. 130, n. 38, p. 12550, doi. 10.1002/ange.201802843
By:
- Zhu, Ying;
- Clair, Geremy;
- Chrisler, William B.;
- Shen, Yufeng;
- Zhao, Rui;
- Shukla, Anil K.;
- Moore, Ronald J.;
- Misra, Ravi S.;
- Pryhuber, Gloria S.;
- Smith, Richard D.;
- Ansong, Charles;
- Kelly, Ryan T.
Publication type:
Article
Urine gastrin‐releasing peptide in the first week correlates with bronchopulmonary dysplasia and post‐prematurity respiratory disease.
Published in:
Pediatric Pulmonology, 2020, v. 55, n. 4, p. 899, doi. 10.1002/ppul.24665
By:
- Voynow, Judith A.;
- Fisher, Kimberley;
- Sunday, Mary E.;
- Cotten, Charles M.;
- Hamvas, Aaron;
- Hendricks‐Muñoz, Karen D.;
- Poindexter, Brenda B.;
- Pryhuber, Gloria S.;
- Ren, Clement L.;
- Ryan, Rita M.;
- Sharp, Jack K.;
- Young, Sarah P.;
- Zhang, Haoyue;
- Greenberg, Rachel G.;
- Herring, Amy H.;
- Davis, Stephanie D.
Publication type:
Article
Alveolar Airspace Size in Healthy and Diseased Infant Lungs Measured via Hyperpolarized <sup>3</sup>He Gas Diffusion Magnetic Resonance Imaging.
Published in:
Neonatology (16617800), 2020, v. 117, n. 6, p. 704, doi. 10.1159/000511084
By:
- Higano, Nara S.;
- Thomen, Robert P.;
- Quirk, James D.;
- Huyck, Heidie L.;
- Hahn, Andrew D.;
- Fain, Sean B.;
- Pryhuber, Gloria S.;
- Woods, Jason C.
Publication type:
Article
Proteomic Analysis of Single Mammalian Cells Enabled by Microfluidic Nanodroplet Sample Preparation and Ultrasensitive NanoLC‐MS.
Published in:
Angewandte Chemie International Edition, 2018, v. 57, n. 38, p. 12370, doi. 10.1002/anie.201802843
By:
- Zhu, Ying;
- Clair, Geremy;
- Chrisler, William B.;
- Shen, Yufeng;
- Zhao, Rui;
- Shukla, Anil K.;
- Moore, Ronald J.;
- Misra, Ravi S.;
- Pryhuber, Gloria S.;
- Smith, Richard D.;
- Ansong, Charles;
- Kelly, Ryan T.
Publication type:
Article
MicroRNA 219-5p inhibits alveolarization by reducing platelet derived growth factor receptor-alpha.
Published in:
2021
By:
- Freeman, Amelia;
- Qiao, Luhua;
- Olave, Nelida;
- Rezonzew, Gabriel;
- Gentle, Samuel;
- Halloran, Brian;
- Pryhuber, Gloria S.;
- Gaggar, Amit;
- Tipple, Trent E.;
- Ambalavanan, Namasivayam;
- Lal, Charitharth Vivek
Publication type:
journal article
Effect of cumulative oxygen exposure on respiratory symptoms during infancy among VLBW infants without bronchopulmonary dysplasia.
Published in:
Pediatric Pulmonology, 2010, v. 45, n. 4, p. 371, doi. 10.1002/ppul.21199
By:
- Stevens, Timothy P.;
- Dylag, Andrew;
- Panthagani, Indira;
- Pryhuber, Gloria;
- Halterman, Jill
Publication type:
Article
Tracheal Aspirate Levels of the Matricellular Protein SPARC Predict Development of Bronchopulmonary Dysplasia.
Published in:
PLoS ONE, 2015, v. 10, n. 12, p. 1, doi. 10.1371/journal.pone.0144122
By:
- Popova, Antonia P.;
- Cui, Tracy X.;
- Kaciroti, Niko;
- Goldsmith, Adam M.;
- Linn, Marisa J.;
- Pryhuber, Gloria S.;
- Hershenson, Marc B.
Publication type:
Article
Correction: Neonatal Periostin Knockout Mice Are Protected from Hyperoxia-Induced Alveolar Simplication.
Published in:
PLoS ONE, 2015, v. 10, n. 6, p. 1, doi. 10.1371/journal.pone.0130369
By:
- Bozyk, Paul D.;
- Bentley, J. Kelley;
- Popova, Antonia P.;
- Anyanwu, Anuli C.;
- Linn, Marisa D.;
- Goldsmith, Adam M.;
- Pryhuber, Gloria S.;
- Moore, Bethany B.;
- Hershenson, Marc B.
Publication type:
Article
Neonatal Periostin Knockout Mice Are Protected from Hyperoxia-Induced Alveolar Simplication.
Published in:
PLoS ONE, 2012, v. 7, n. 2, p. 1, doi. 10.1371/journal.pone.0031336
By:
- Bozyk, Paul D.;
- Bentley, J. Kelley;
- Popova, Antonia P.;
- Anyanwu, Anuli C.;
- Linn, Marisa D.;
- Goldsmith, Adam M.;
- Pryhuber, Gloria S.;
- Moore, Bethany B.;
- Hershenson, Marc B.
Publication type:
Article
Tumor Necrosis Factor-α--Induced Lung Cell Expression of Antiapoptotic Genes TRAF1 and cIAP2.
Published in:
American Journal of Respiratory Cell & Molecular Biology, 2000, v. 22, n. 2, p. 150, doi. 10.1165/ajrcmb.22.2.3783
By:
- Pryhuber, Gloria S.;
- Huyck, Heidie L.;
- Staversky, Rhonda J.;
- Finkelstein, Jacob N.;
- O'Reilly, Michael A.
Publication type:
Article
Proteomic Analysis of Human Lung Development.
Published in:
2022
By:
- Clair, Geremy;
- Bramer, Lisa M.;
- Misra, Ravi;
- McGraw, Matthew D.;
- Bhattacharya, Soumyaroop;
- Kitzmiller, Joseph A.;
- Song Feng;
- Danna, Vincent G.;
- Bandyopadhyay, Gautam;
- Bhotika, Harsh;
- Huyck, Heidie L.;
- Deutsch, Gail H.;
- Mariani, Thomas J.;
- Carson, James P.;
- Whitsett, Jeffrey A.;
- Pryhuber, Gloria S.;
- Adkins, Joshua N.;
- Ansong, Charles;
- Feng, Song
Publication type:
journal article
Proteomic analysis of human lung development.
Published in:
American Journal of Respiratory & Critical Care Medicine, 2022, v. 205, n. 2, p. E1, doi. 10.1164/rccm.202008-3303oc
By:
- Clair, Geremy;
- Bramer, Lisa M.;
- Misra, Ravi;
- McGraw, Matthew D.;
- Bhattacharya, Soumyaroop;
- Kitzmiller, Joseph A.;
- Song Feng;
- Danna, Vincent G.;
- Bandyopadhyay, Gautam;
- Bhotika, Harsh;
- Huyck, Heidie L.;
- Deutsch, Gail H.;
- Mariani, Thomas J.;
- Carson, James;
- Whitsett, Jeffrey A.;
- Pryhuber, Gloria S.;
- Adkins, Joshua N.;
- Ansong, Charles
Publication type:
Article
Renewed Promise of Nonionizing Radiation Imaging for Chronic Lung Disease in Preterm Infants.
Published in:
2018
By:
- Pryhuber, Gloria S
Publication type:
Editorial
Eight practices for data management to enable team data science.
Published in:
Journal of Clinical & Translational Science, 2021, v. 5, n. 1, p. 1, doi. 10.1017/cts.2020.501
By:
- McDavid, Andrew;
- Corbett, Anthony M.;
- Dutra, Jennifer L.;
- Straw, Andrew G.;
- Topham, David J.;
- Pryhuber, Gloria S.;
- Caserta, Mary T.;
- Gill, Steven R.;
- Scheible, Kristin M.;
- Holden-Wiltse, Jeanne
Publication type:
Article
Stability of T Cell Phenotype and Functional Assays Following Heparinized Umbilical Cord Blood Collection.
Published in:
Cytometry. Part A, 2012, v. 81, n. 11, p. 1, doi. 10.1002/cyto.a.22203
By:
- Scheible, Kristin;
- Secor-Socha, Shelley;
- Wightman, Terry;
- Hongyue Wang;
- Mariani, Thomas J.;
- Topham, David J.;
- Pryhuber, Gloria;
- Quataert, Sally
Publication type:
Article
Neonatal hyperoxia activates ATF4 to stimulate folate metabolism and AT2 cell proliferation.
Published in:
American Journal of Respiratory Cell & Molecular Biology, 2022, v. 66, n. 4, p. E1
By:
- Min Yee;
- McDavid, Andrew N.;
- Cohen, Ethan David;
- Huyck, Heidie L.;
- Poole, Cory;
- Altman, Brian J.;
- Maniscalco, William M.;
- Deutsch, Gail H.;
- Pryhuber, Gloria S.;
- O’Reilly, Michael A.
Publication type:
Article
Neonatal Hyperoxia Activates Activating Transcription Factor 4 to Stimulate Folate Metabolism and Alveolar Epithelial Type 2 Cell Proliferation.
Published in:
American Journal of Respiratory Cell & Molecular Biology, 2022, v. 66, n. 4, p. 402, doi. 10.1165/rcmb.2021-0363OC
By:
- Min Yee;
- McDavid, Andrew N.;
- Cohen, Ethan David;
- Huyck, Heidie L.;
- Poole, Cory;
- Altman, Brian J.;
- Maniscalco, William M.;
- Deutsch, Gail H.;
- Pryhuber, Gloria S.;
- O’Reilly, Michael A.
Publication type:
Article
Inhibition of Regulatory-Associated Protein of Mechanistic Target of Rapamycin Prevents Hyperoxia-Induced Lung Injury by Enhancing Autophagy and Reducing Apoptosis in Neonatal Mice.
Published in:
American Journal of Respiratory Cell & Molecular Biology, 2016, v. 55, n. 5, p. 722, doi. 10.1165/rcmb.2015-0349OC
By:
- Sureshbabu, Angara;
- Syed, Mansoor;
- Das, Pragnya;
- Janér, Cecilia;
- Pryhuber, Gloria;
- Rahman, Arshad;
- Andersson, Sture;
- Homer, Robert J.;
- Bhandari, Vineet
Publication type:
Article
Hyperoxia and Interferon-γ-Induced Injury in Developing Lungs Occur via Cyclooxygenase-2 and the Endoplasmic Reticulum Stress-Dependent Pathway.
Published in:
American Journal of Respiratory Cell & Molecular Biology, 2013, v. 48, n. 6, p. 749, doi. 10.1165/rcmb.2012-0381OC
By:
- Rayman Choo-Wing;
- Syed, Mansoor A.;
- Harijith, Anantha;
- Bowen, Brianne;
- Pryhuber, Gloria;
- Janér, Cecilia;
- Andersson, Sture;
- Homer, Robert J.;
- Bhandari, Vineet
Publication type:
Article
Alterations in VASP phosphorylation and profilin1 and cofilin1 expression in hyperoxic lung injury and BPD.
Published in:
2018
By:
- Ali, Mehboob;
- Heyob, Kathryn;
- Tipple, Trent E.;
- Pryhuber, Gloria S.;
- Rogers, Lynette K.
Publication type:
journal article
Epithelial-mesenchymal interactions in the alteration of gene expression and morphology following lung injury.
Published in:
Microscopy Research & Technique, 1997, v. 38, n. 5, p. 473, doi. 10.1002/(SICI)1097-0029(19970901)38:5<473::AID-JEMT3>3.0.CO;2-J
By:
- O'Reilly, Michael A.;
- Stripp, Barry R.;
- Pryhuber, Gloria S.
Publication type:
Article
Genome-Wide Transcriptional Profiling Reveals Connective Tissue Mast Cell Accumulation in Bronchopulmonary Dysplasia.
Published in:
American Journal of Respiratory & Critical Care Medicine, 2012, v. 186, n. 4, p. 349, doi. 10.1164/rccm.201203-0406OC
By:
- Bhattacharya, Soumyaroop;
- Go, Diana;
- Krenitsky, Daria L.;
- Huyck, Heidi L.;
- Solleti, Siva Kumar;
- Lunger, Valerie A.;
- Metlay, Leon;
- Srisuma, Sorachai;
- Wert, Susan E.;
- Mariani, Thomas J.;
- Pryhuber, Gloria S.
Publication type:
Article
Developmental regulation of p66Shc is altered by bronchopulmonary dysplasia in baboons and humans.
Published in:
2005
By:
- Lee, Matt K.;
- Pryhuber, Gloria S.;
- Schwarz, Margaret A.;
- Smith, Susan M.;
- Pavlova, Zdena;
- Sunday, Mary E.
Publication type:
journal article
Prematurity and respiratory outcomes program (PROP): study protocol of a prospective multicenter study of respiratory outcomes of preterm infants in the United States.
Published in:
2015
By:
- Pryhuber, Gloria S;
- Maitre, Nathalie L;
- Ballard, Roberta A;
- Cifelli, Denise;
- Davis, Stephanie D;
- Ellenberg, Jonas H;
- Greenberg, James M;
- Kemp, James;
- Mariani, Thomas J;
- Panitch, Howard;
- Ren, Clement;
- Shaw, Pamela;
- Taussig, Lynn M;
- Hamvas, Aaron;
- Prematurity and Respiratory Outcomes Program Investigators
Publication type:
journal article
Prematurity and respiratory outcomes program (PROP): study protocol of a prospective multicenter study of respiratory outcomes of preterm infants in the United States.
Published in:
BMC Pediatrics, 2015, v. 15, n. 1, p. 1, doi. 10.1186/s12887-015-0346-3
By:
- Pryhuber, Gloria S.;
- Maitre, Nathalie L.;
- Ballard, Roberta A.;
- Cifelli, Denise;
- Davis, Stephanie D.;
- Ellenberg, Jonas H.;
- Greenberg, James M.;
- Kemp, James;
- Mariani, Thomas J.;
- Panitch, Howard;
- Ren, Clement;
- Shaw, Pamela;
- Taussig, Lynn M.;
- Hamvas, Aaron
Publication type:
Article
Induction of Chemokines by Low-Dose Intratracheal Silica Is Reduced in TNFR I (p55) Null Mice.
Published in:
Toxicological Sciences, 2003, v. 72, n. 1, p. 150, doi. 10.1093/toxsci/kfg018
By:
- Pryhuber, Gloria S.;
- Huyck, Heidie L.;
- Baggs, Raymond;
- Oberdörster, Günter;
- Finkelstein, Jacob N.
Publication type:
Article
CXCL10 deficiency limits macrophage infiltration, preserves lung matrix, and enables lung growth in bronchopulmonary dysplasia.
Published in:
Inflammation & Regeneration, 2023, v. 43, n. 1, p. 1, doi. 10.1186/s41232-023-00301-6
By:
- Hirani, Dharmesh V.;
- Thielen, Florian;
- Mansouri, Siavash;
- Danopoulos, Soula;
- Vohlen, Christina;
- Haznedar-Karakaya, Pinar;
- Mohr, Jasmine;
- Wilke, Rebecca;
- Selle, Jaco;
- Grosch, Thomas;
- Mizik, Ivana;
- Odenthal, Margarete;
- Alvira, Cristina M.;
- Kuiper-Makris, Celien;
- Pryhuber, Gloria S.;
- Pallasch, Christian;
- van Koningsbruggen-Rietschel, S.;
- Al-Alam, Denise;
- Seeger, Werner;
- Savai, Rajkumar
Publication type:
Article
The Effects of Interleukin-1β in Tumor Necrosis Factor-α-Induced Acute Pulmonary Inflammation in Mice.
Published in:
Mediators of Inflammation, 2009, v. 2009, p. 1, doi. 10.1155/2009/958658
By:
- Saperstein, Sara;
- Huyck, Heidie;
- Kimball, Elizabeth;
- Johnston, Carl;
- Finkelstein, Jacob;
- Pryhuber, Gloria
Publication type:
Article
Neonatal gut and respiratory microbiota: coordinated development through time and space.
Published in:
Microbiome, 2018, v. 6, n. 1, p. N.PAG, doi. 10.1186/s40168-018-0566-5
By:
- Grier, Alex;
- McDavid, Andrew;
- Wang, Bokai;
- Qiu, Xing;
- Java, James;
- Bandyopadhyay, Sanjukta;
- Yang, Hongmei;
- Holden-Wiltse, Jeanne;
- Kessler, Haeja A;
- Gill, Ann L;
- Huyck, Heidie;
- Falsey, Ann R;
- Topham, David J;
- Scheible, Kristin M;
- Caserta, Mary T;
- Pryhuber, Gloria S;
- Gill, Steven R
Publication type:
Article
Impact of prematurity and nutrition on the developing gut microbiome and preterm infant growth.
Published in:
Microbiome, 2017, v. 5, p. 1, doi. 10.1186/s40168-017-0377-0
By:
- Grier, Alex;
- Xing Qiu;
- Bandyopadhyay, Sanjukta;
- Holden-Wiltse, Jeanne;
- Kessler, Haeja A.;
- Gill, Ann L.;
- Hamilton, Brooke;
- Huyck, Heidie;
- Misra, Sara;
- Mariani, Thomas J.;
- Ryan, Rita M.;
- Scholer, Lori;
- Scheible, Kristin M.;
- Yi-Horng Lee;
- Caserta, Mary T.;
- Pryhuber, Gloria S.;
- Gill, Steven R.
Publication type:
Article
WNT5a-ROR Signaling Is Essential for Alveologenesis.
Published in:
Cells (2073-4409), 2020, v. 9, n. 2, p. 384, doi. 10.3390/cells9020384
By:
- Li, Changgong;
- Smith, Susan M;
- Peinado, Neil;
- Gao, Feng;
- Li, Wei;
- Lee, Matt K;
- Zhou, Beiyun;
- Bellusci, Saverio;
- Pryhuber, Gloria S;
- Ho, Hsin-Yi Henry;
- Borok, Zea;
- Minoo, Parviz
Publication type:
Article
Hyperoxia causes miR-34a-mediated injury via angiopoietin-1 in neonatal lungs.
Published in:
Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-01349-y
By:
- Syed, Mansoor;
- Das, Pragnya;
- Pawar, Aishwarya;
- Aghai, Zubair H.;
- Kaskinen, Anu;
- Zhuang, Zhen W.;
- Ambalavanan, Namasivayam;
- Pryhuber, Gloria;
- Andersson, Sture;
- Bhandari, Vineet
Publication type:
Article
Preparation of noninfectious scRNAseq samples from SARS-CoV-2-infected epithelial cells.
Published in:
PLoS ONE, 2023, v. 17, n. 2, p. 1, doi. 10.1371/journal.pone.0281898
By:
- Osborn, Raven M.;
- Leach, Justin;
- Zanche, Michelle;
- Ashton, John M.;
- Chu, ChinYi;
- Thakar, Juilee;
- Dewhurst, Stephen;
- Rosenberger, Sonia;
- Pavelka, Martin;
- Pryhuber, Gloria S.;
- Mariani, Thomas J.;
- Anderson, Christopher S.
Publication type:
Article
Attenuation of miR-17∼92 Cluster in Bronchopulmonary Dysplasia.
Published in:
2015
By:
- Rogers, Lynette K.;
- Robbins, Mary;
- Dakhlallah, Duaa;
- Zhaogang Yang;
- Lee, L. James;
- Mikhail, Madison;
- Nuovo, Gerard;
- Pryhuber, Gloria S.;
- McGwin, Gerald;
- Marsh, Clay B.;
- Tipple, Trent E.;
- Yang, Zhaogang
Publication type:
journal article
Cell type-resolved human lung lipidome reveals cellular cooperation in lung function.
Published in:
Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-31640-x
By:
- Kyle, Jennifer E.;
- Clair, Geremy;
- Bandyopadhyay, Gautam;
- Misra, Ravi S.;
- Zink, Erika M.;
- Bloodsworth, Kent J.;
- Shukla, Anil K.;
- Du, Yina;
- Lillis, Jacquelyn;
- Myers, Jason R.;
- Ashton, John;
- Bushnell, Timothy;
- Cochran, Matthew;
- Deutsch, Gail;
- Baker, Erin S.;
- Carson, James P.;
- Mariani, Thomas J.;
- Xu, Yan;
- Whitsett, Jeffrey A.;
- Pryhuber, Gloria
Publication type:
Article
Single-Cell Transcriptomic Profiling Identifies Molecular Phenotypes of Newborn Human Lung Cells.
Published in:
Genes, 2024, v. 15, n. 3, p. 298, doi. 10.3390/genes15030298
By:
- Bhattacharya, Soumyaroop;
- Myers, Jacquelyn A.;
- Baker, Cameron;
- Guo, Minzhe;
- Danopoulos, Soula;
- Myers, Jason R.;
- Bandyopadhyay, Gautam;
- Romas, Stephen T.;
- Huyck, Heidie L.;
- Misra, Ravi S.;
- Dutra, Jennifer;
- Holden-Wiltse, Jeanne;
- McDavid, Andrew N.;
- Ashton, John M.;
- Al Alam, Denise;
- Potter, S. Steven;
- Whitsett, Jeffrey A.;
- Xu, Yan;
- Pryhuber, Gloria S.;
- Mariani, Thomas J.
Publication type:
Article
Type VI collagen promotes lung epithelial cell spreading and wound-closure.
Published in:
PLoS ONE, 2018, v. 13, n. 12, p. 1, doi. 10.1371/journal.pone.0209095
By:
- Mereness, Jared A.;
- Bhattacharya, Soumyaroop;
- Wang, Qian;
- Ren, Yue;
- Pryhuber, Gloria S.;
- Mariani, Thomas J.
Publication type:
Article
Airway Gene Expression Correlates of Respiratory Syncytial Virus Disease Severity and Microbiome Composition in Infants.
Published in:
2021
By:
- Chu, Chin-Yi;
- Qiu, Xing;
- McCall, Matthew N;
- Wang, Lu;
- Corbett, Anthony;
- Holden-Wiltse, Jeanne;
- Slaunwhite, Christopher;
- Grier, Alex;
- Gill, Steven R;
- Pryhuber, Gloria S;
- Falsey, Ann R;
- Topham, David J;
- Caserta, Mary T;
- Walsh, Edward E;
- Mariani, Thomas J
Publication type:
journal article
TNF is required for the induction but not the maintenance of compression-induced BME signals in murine tail vertebrae: Limitations of anti-TNF therapy for degenerative disc disease.
Published in:
Journal of Orthopaedic Research, 2011, v. 29, n. 9, p. 1367, doi. 10.1002/jor.21370
By:
- Papuga, M. Owen;
- Kwok, Edmund;
- You, Zhigang;
- Rubery, Paul T.;
- Dougherty, Paul E.;
- Pryhuber, Gloria;
- Beck, Christopher A.;
- Hilton, Matthew J.;
- Awad, Hani A.;
- Schwarz, Edward M.
Publication type:
Article

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