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- Title
Research on comprehensive visualization method of molecular structure and gene sequence data.
- Authors
SONG Cheng-long; ZOU Chen; WANG Wen-ke; LI Si-kun
- Abstract
With the rise and the rapid development of system biology, in order to explore the relationship between different levels of Bioinformatics relevance, the need of comprehensive visualization of biological scientific computing data at different levels is increasingly urgent. A method of constructing an integration framework to realize the comprehensive visualization of molecular structure data and genomic sequence data is proposed. The visualization integration framework can achieve the unified management and unified GUI for different levels of visualization tools. By defining the method of describing the associated data, the framework realizes the integration of exiting molecular structure data and genomic sequence data and effectively supports the development of integrated function for visual molecular structure data and genomic sequence data. The method is used to develop a comprehensive visualization prototype system of molecular structure data and gene sequence data, realizing comprehensive visualization functions such as the synchronous display of both molecular structure data and genomic sequence data, and the display of the gene fragments and the local space structure of related molecular, and so on. Preliminary application and analysis show that the comprehensive visualization method is proposed with good scalability. The realized comprehensive visualization functions have good application prospects for studying the incidence relationship between molecular structure data and genomic sequence data.
- Publication
Computer Engineering & Science / Jisuanji Gongcheng yu Kexue, 2013, Vol 35, Issue 12, p26
- ISSN
1007-130X
- Publication type
Article
- DOI
10.3969/j.issn.1007-130X.2013.12.005