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A global lipid map reveals host dependency factors conserved across SARS-CoV-2 variants.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-31097-7
By:
- Farley, Scotland E.;
- Kyle, Jennifer E.;
- Leier, Hans C.;
- Bramer, Lisa M.;
- Weinstein, Jules B.;
- Bates, Timothy A.;
- Lee, Joon-Yong;
- Metz, Thomas O.;
- Schultz, Carsten;
- Tafesse, Fikadu G.
Publication type:
Article
Integration of Infant Metabolite, Genetic, and Islet Autoimmunity Signatures to Predict Type 1 Diabetes by Age 6 Years.
Published in:
Journal of Clinical Endocrinology & Metabolism, 2022, v. 107, n. 8, p. 2329, doi. 10.1210/clinem/dgac225
By:
- Webb-Robertson, Bobbie-Jo M.;
- Nakayasu, Ernesto S.;
- Frohnert, Brigitte I.;
- Bramer, Lisa M.;
- Akers, Sarah M.;
- Norris, Jill M.;
- Vehik, Kendra;
- Ziegler, Anette-G.;
- Metz, Thomas O.;
- Rich, Stephen S.;
- Rewers, Marian J.
Publication type:
Article
Genomes and secretomes of Ascomycota fungi reveal diverse functions in plant biomass decomposition and pathogenesis.
Published in:
BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6358-x
By:
- Challacombe, Jean F.;
- Hesse, Cedar N.;
- Bramer, Lisa M.;
- McCue, Lee Ann;
- Lipton, Mary;
- Purvine, Samuel;
- Nicora, Carrie;
- Gallegos-Graves, La Verne;
- Porras-Alfaro, Andrea;
- Kuske, Cheryl R.
Publication type:
Article
Characterizing Families of Spectral Similarity Scores and Their Use Cases for Gas Chromatography–Mass Spectrometry Small Molecule Identification.
Published in:
Metabolites (2218-1989), 2023, v. 13, n. 10, p. 1101, doi. 10.3390/metabo13101101
By:
- Degnan, David J.;
- Flores, Javier E.;
- Brayfindley, Eva R.;
- Paurus, Vanessa L.;
- Webb-Robertson, Bobbie-Jo M.;
- Clendinen, Chaevien S.;
- Bramer, Lisa M.
Publication type:
Article
Simulated Night-Shift Schedule Disrupts the Plasma Lipidome and Reveals Early Markers of Cardiovascular Disease Risk [Corrigendum].
Published in:
Nature & Science of Sleep, 2023, v. 15, p. 477, doi. 10.2147/NSS.S427012
By:
- Kyle, Jennifer E;
- Bramer, Lisa M;
- Claborne, Daniel;
- Stratton, Kelly G;
- Bloodsworth, Kent J;
- Teeguarden, Justin G;
- Gaddameedhi, Shobhan;
- Metz, Thomas O;
- Van Dongen, Hans PA
Publication type:
Article
Simulated Night-Shift Schedule Disrupts the Plasma Lipidome and Reveals Early Markers of Cardiovascular Disease Risk.
Published in:
Nature & Science of Sleep, 2022, v. 14, p. 981, doi. 10.2147/NSS.S363437
By:
- Kyle, Jennifer E;
- Bramer, Lisa M;
- Claborne, Daniel;
- Stratton, Kelly G;
- Bloodsworth, Kent J;
- Teeguarden, Justin G;
- Gaddameedhi, Shobhan;
- Metz, Thomas O;
- Van Dongen, Hans PA
Publication type:
Article
Quantitative Mapping of Nanoscale Chemical Dynamics in Sub‐Sampled Operando (S)TEM Images using Spatio‐Temporal Analytics.
Published in:
ChemCatChem, 2018, v. 10, n. 14, p. 3115, doi. 10.1002/cctc.201800333
By:
- Stanfill, Bryan A.;
- Reehl, Sarah M.;
- Johnson, Margaret C.;
- Browning, Nigel D.;
- Mehdi, B. Layla;
- Caragea, Petruta C.;
- Bramer, Lisa M.
Publication type:
Article
Fine-tuning TrailMap: The utility of transfer learning to improve the performance of deep learning in axon segmentation of light-sheet microscopy images.
Published in:
PLoS ONE, 2024, v. 19, n. 3, p. 1, doi. 10.1371/journal.pone.0293856
By:
- Oostrom, Marjolein;
- Muniak, Michael A.;
- Eichler West, Rogene M.;
- Akers, Sarah;
- Pande, Paritosh;
- Obiri, Moses;
- Wang, Wei;
- Bowyer, Kasey;
- Wu, Zhuhao;
- Bramer, Lisa M.;
- Mao, Tianyi;
- Webb-Robertson, Bobbie Jo M.
Publication type:
Article
Proteomic Analysis of Human Lung Development.
Published in:
2022
By:
- Clair, Geremy;
- Bramer, Lisa M.;
- Misra, Ravi;
- McGraw, Matthew D.;
- Bhattacharya, Soumyaroop;
- Kitzmiller, Joseph A.;
- Song Feng;
- Danna, Vincent G.;
- Bandyopadhyay, Gautam;
- Bhotika, Harsh;
- Huyck, Heidie L.;
- Deutsch, Gail H.;
- Mariani, Thomas J.;
- Carson, James P.;
- Whitsett, Jeffrey A.;
- Pryhuber, Gloria S.;
- Adkins, Joshua N.;
- Ansong, Charles;
- Feng, Song
Publication type:
journal article
Proteomic analysis of human lung development.
Published in:
American Journal of Respiratory & Critical Care Medicine, 2022, v. 205, n. 2, p. E1, doi. 10.1164/rccm.202008-3303oc
By:
- Clair, Geremy;
- Bramer, Lisa M.;
- Misra, Ravi;
- McGraw, Matthew D.;
- Bhattacharya, Soumyaroop;
- Kitzmiller, Joseph A.;
- Song Feng;
- Danna, Vincent G.;
- Bandyopadhyay, Gautam;
- Bhotika, Harsh;
- Huyck, Heidie L.;
- Deutsch, Gail H.;
- Mariani, Thomas J.;
- Carson, James;
- Whitsett, Jeffrey A.;
- Pryhuber, Gloria S.;
- Adkins, Joshua N.;
- Ansong, Charles
Publication type:
Article
From Prevention to Disease Perturbations: A Multi-Omic Assessment of Exercise and Myocardial Infarctions.
Published in:
Biomolecules (2218-273X), 2021, v. 11, n. 1, p. 40, doi. 10.3390/biom11010040
By:
- Odenkirk, Melanie T.;
- Stratton, Kelly G.;
- Bramer, Lisa M.;
- Webb-Robertson, Bobbie-Jo M.;
- Bloodsworth, Kent J.;
- Monroe, Matthew E.;
- Burnum-Johnson, Kristin E.;
- Baker, Erin S.
Publication type:
Article
Fourier transform ion cyclotron resonance mass spectrometry (FT‐ICR‐MS) peak intensity normalization for complex mixture analyses.
Published in:
Rapid Communications in Mass Spectrometry: RCM, 2021, v. 35, n. 9, p. 1, doi. 10.1002/rcm.9068
By:
- Thompson, Allison M.;
- Stratton, Kelly G.;
- Bramer, Lisa M.;
- Zavoshy, Nicole S.;
- McCue, Lee Ann
Publication type:
Article
Soil Metabolomics Predict Microbial Taxa as Biomarkers of Moisture Status in Soils from a Tidal Wetland.
Published in:
Microorganisms, 2022, v. 10, n. 8, p. 1653, doi. 10.3390/microorganisms10081653
By:
- RoyChowdhury, Taniya;
- Bramer, Lisa M.;
- Brown, Joseph;
- Kim, Young-Mo;
- Zink, Erika;
- Metz, Thomas O.;
- McCue, Lee Ann;
- Diefenderfer, Heida L.;
- Bailey, Vanessa
Publication type:
Article
Factors that influence environmental health literacy from returning polycyclic aromatic hydrocarbon exposure results.
Published in:
International Public Health Journal, 2023, v. 15, n. 3, p. 317
By:
- Riley, Kylie W.;
- Burke, Kimberly;
- Cole, Anabel;
- Ureno, Maricela;
- Dixon, Holly M.;
- Calero, Lehyla;
- Bramer, Lisa M.;
- Waters, Katrina M.;
- Anderson, Kim A.;
- Herbstman, Julie B.;
- Rohlman, Diana
Publication type:
Article
Discovery top-down proteomics in symbiotic soybean root nodules.
Published in:
Frontiers in Analytical Science, 2022, p. 1, doi. 10.3389/frans.2022.1012707
By:
- Mowei Zhou;
- Fulcher, James M.;
- Zemaitis, Kevin J.;
- Degnan, David J.;
- Yen-Chen Liao;
- Veličković, Marija;
- Veličković, Dušan;
- Bramer, Lisa M.;
- Kew, William R.;
- Stacey, Gary;
- Paša-Tolić, Ljiljana
Publication type:
Article
Rapid remodeling of the soil lipidome in response to a drying-rewetting event.
Published in:
Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-022-01427-4
By:
- Couvillion, Sneha P.;
- Danczak, Robert E.;
- Naylor, Dan;
- Smith, Montana L.;
- Stratton, Kelly G.;
- Paurus, Vanessa L.;
- Bloodsworth, Kent J.;
- Farris, Yuliya;
- Schmidt, Darren J.;
- Richardson, Rachel E.;
- Bramer, Lisa M.;
- Fansler, Sarah J.;
- Nakayasu, Ernesto S.;
- McDermott, Jason E.;
- Metz, Thomas O.;
- Lipton, Mary S.;
- Jansson, Janet K.;
- Hofmockel, Kirsten S.
Publication type:
Article
Carbon Inputs From Riparian Vegetation Limit Oxidation of Physically Bound Organic Carbon Via Biochemical and Thermodynamic Processes.
Published in:
Journal of Geophysical Research. Biogeosciences, 2017, v. 122, n. 12, p. 3188, doi. 10.1002/2017JG003967
By:
- Graham, Emily B.;
- Tfaily, Malak M.;
- Crump, Alex R.;
- Goldman, Amy E.;
- Bramer, Lisa M.;
- Arntzen, Evan;
- Romero, Elvira;
- Resch, C. Tom;
- Kennedy, David W.;
- Stegen, James C.
Publication type:
Article
Development and Outcomes of Returning Polycyclic Aromatic Hydrocarbon Exposure Results in the Washington Heights, NYC Community.
Published in:
Environmental Health Insights, 2024, p. 1, doi. 10.1177/11786302241262604
By:
- Riley, Kylie W;
- Burke, Kimberly;
- Dixon, Holly;
- Holmes, Darrell;
- Calero, Lehyla;
- Barton, Michael;
- Miller, Rachel L;
- Bramer, Lisa M;
- Waters, Katrina M;
- Anderson, Kim A;
- Herbstman, Julie;
- Rohlman, Diana
Publication type:
Article
Prediction of the development of islet autoantibodies through integration of environmental, genetic, and metabolic markers.
Published in:
Journal of Diabetes, 2021, v. 13, n. 2, p. 143, doi. 10.1111/1753-0407.13093
By:
- Webb‐Robertson, Bobbie‐Jo M.;
- Bramer, Lisa M.;
- Stanfill, Bryan A.;
- Reehl, Sarah M.;
- Nakayasu, Ernesto S.;
- Metz, Thomas O.;
- Frohnert, Brigitte I.;
- Norris, Jill M.;
- Johnson, Randi K.;
- Rich, Stephen S.;
- Rewers, Marian J.
Publication type:
Article
Elucidating regulatory processes of intense physical activity by multi-omics analysis.
Published in:
Military Medical Research, 2023, v. 10, n. 1, p. 1, doi. 10.1186/s40779-023-00477-5
By:
- Nakayasu, Ernesto S.;
- Gritsenko, Marina A.;
- Kim, Young-Mo;
- Kyle, Jennifer E.;
- Stratton, Kelly G.;
- Nicora, Carrie D.;
- Munoz, Nathalie;
- Navarro, Kathleen M.;
- Claborne, Daniel;
- Gao, Yuqian;
- Weitz, Karl K.;
- Paurus, Vanessa L.;
- Bloodsworth, Kent J.;
- Allen, Kelsey A.;
- Bramer, Lisa M.;
- Montes, Fernando;
- Clark, Kathleen A.;
- Tietje, Grant;
- Teeguarden, Justin;
- Burnum-Johnson, Kristin E.
Publication type:
Article
Impact of acute temperature and air pollution exposures on adult lung function: A panel study of asthmatics.
Published in:
PLoS ONE, 2022, v. 17, n. 6, p. 1, doi. 10.1371/journal.pone.0270412
By:
- Evoy, Richard;
- Kincl, Laurel;
- Rohlman, Diana;
- Bramer, Lisa M.;
- Dixon, Holly M.;
- Hystad, Perry;
- Bae, Harold;
- Barton, Michael;
- Phillips, Aaron;
- Miller, Rachel L.;
- Waters, Katrina M.;
- Herbstman, Julie B.;
- Anderson, Kim A.
Publication type:
Article
How Many Measurements of Soil Moisture within the Footprint of a Ground-Based Microwave Radiometer Are Required to Account for Meter-Scale Spatial Variability?
Published in:
2013
By:
- Bramer, Lisa M.;
- Hornbuckle, Brian K.;
- Caragea, Petruța C.
Publication type:
Abstract
Modeling PAH Mixture Interactions in a Human In Vitro Organotypic Respiratory Model.
Published in:
International Journal of Molecular Sciences, 2024, v. 25, n. 8, p. 4326, doi. 10.3390/ijms25084326
By:
- Colvin, Victoria C.;
- Bramer, Lisa M.;
- Rivera, Brianna N.;
- Pennington, Jamie M.;
- Waters, Katrina M.;
- Tilton, Susan C.
Publication type:
Article
ftmsRanalysis: An R package for exploratory data analysis and interactive visualization of FT-MS data.
Published in:
PLoS Computational Biology, 2020, v. 16, n. 3, p. 1, doi. 10.1371/journal.pcbi.1007654
By:
- Bramer, Lisa M.;
- White, Amanda M.;
- Stratton, Kelly G.;
- Thompson, Allison M.;
- Claborne, Daniel;
- Hofmockel, Kirsten;
- McCue, Lee Ann
Publication type:
Article
Preserved and variable spatial‐chemical changes of lipids across tomato leaves in response to central vein wounding reveals potential origin of linolenic acid in signal transduction cascade.
Published in:
Plant-Environment Interactions, 2021, v. 2, n. 1, p. 28, doi. 10.1002/pei3.10038
By:
- Veličković, Dušan;
- Chu, Rosalie K.;
- Henkel, Corinna;
- Nyhuis, Annika;
- Tao, Nannan;
- Kyle, Jennifer E.;
- Adkins, Joshua N.;
- Anderton, Christopher R.;
- Paurus, Vanessa;
- Bloodsworth, Kent;
- Bramer, Lisa M.;
- Cornett, Dale S.;
- Curtis, Wayne R.;
- Burnum‐Johnson, Kristin E.
Publication type:
Article
PM<sub>2.5</sub> Is Insufficient to Explain Personal PAH Exposure.
Published in:
Geohealth, 2024, v. 8, n. 2, p. 1, doi. 10.1029/2023GH000937
By:
- Bramer, Lisa M.;
- Dixon, Holly M.;
- Rohlman, Diana;
- Scott, Richard P.;
- Miller, Rachel L.;
- Kincl, Laurel;
- Herbstman, Julie B.;
- Waters, Katrina M.;
- Anderson, Kim A.
Publication type:
Article
A global lipid map defines a network essential for Zika virus replication.
Published in:
Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-17433-9
By:
- Leier, Hans C.;
- Weinstein, Jules B.;
- Kyle, Jennifer E.;
- Lee, Joon-Yong;
- Bramer, Lisa M.;
- Stratton, Kelly G.;
- Kempthorne, Douglas;
- Navratil, Aaron R.;
- Tafesse, Endale G.;
- Hornemann, Thorsten;
- Messer, William B.;
- Dennis, Edward A.;
- Metz, Thomas O.;
- Barklis, Eric;
- Tafesse, Fikadu G.
Publication type:
Article
Automated mass spectrometry imaging of over 2000 proteins from tissue sections at 100-μm spatial resolution.
Published in:
Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-019-13858-z
By:
- Piehowski, Paul D.;
- Zhu, Ying;
- Bramer, Lisa M.;
- Stratton, Kelly G.;
- Zhao, Rui;
- Orton, Daniel J.;
- Moore, Ronald J.;
- Yuan, Jia;
- Mitchell, Hugh D.;
- Gao, Yuqian;
- Webb-Robertson, Bobbie-Jo M.;
- Dey, Sudhansu K.;
- Kelly, Ryan T.;
- Burnum-Johnson, Kristin E.
Publication type:
Article
Predictive Modeling of Type 1 Diabetes Stages Using Disparate Data Sources.
Published in:
2020
By:
- Frohnert, Brigitte I.;
- Webb-Robertson, Bobbie-Jo;
- Bramer, Lisa M.;
- Reehl, Sara M.;
- Waugh, Kathy;
- Steck, Andrea K.;
- Norris, Jill M.;
- Rewers, Marian
Publication type:
journal article

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