Found: 33
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KinImmerse: Macromolecular VR for NMR ensembles.
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- Source Code for Biology & Medicine, 2009, v. 4, p. 1, doi. 10.1186/1751-0473-4-3
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- Article
The RNA Ontology Consortium: An open invitation to the RNA community.
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- Journal of Nuclear Medicine Technology, 2006, v. 34, n. 1, p. 1
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- Article
New insights into Hoogsteen base pairs in DNA duplexes from a structure-based survey.
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- Nucleic Acids Research, 2015, v. 43, n. 7, p. 3420, doi. 10.1093/nar/gkv241
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- Article
New tools provide a second look at HDV ribozyme structure, dynamics and cleavage.
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- Nucleic Acids Research, 2014, v. 42, n. 20, p. 12833, doi. 10.1093/nar/gku992
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- Article
MolProbity: all-atom contacts and structure validation for proteins and nucleic acids.
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- Nucleic Acids Research, 2007, v. 35, n. suppl_2, p. W375, doi. 10.1093/nar/gkm216
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- Article
Molprobity's ultimate rotamer-library distributions for model validation.
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- Proteins, 2016, v. 84, n. 9, p. 1177, doi. 10.1002/prot.25039
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- Article
The other 90% of the protein: Assessment beyond the Cαs for CASP8 template-based and high-accuracy models.
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- Proteins, 2009, v. 77, n. S9, p. 29, doi. 10.1002/prot.22551
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- Article
Target domain definition and classification in CASP8.
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- Proteins, 2009, v. 77, n. S9, p. 10, doi. 10.1002/prot.22497
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- Article
Structural genomics of Pyrococcus furiosus: X-ray crystallography reveals 3D domain swapping in rubrerythrin.
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- Proteins, 2004, v. 57, n. 4, p. 878, doi. 10.1002/prot.20280
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- Article
The cis-pro touch-turn: A rare motif preferred at functional sites.
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- Proteins, 2004, v. 56, n. 2, p. 298, doi. 10.1002/prot.20101
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- Article
Structure validation by Cα geometry: ϕ,ψ and Cβ deviation.
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- Proteins, 2003, v. 50, n. 3, p. 437, doi. 10.1002/prot.10286
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- Article
The penultimate rotamer library.
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- Proteins, 2000, v. 40, n. 3, p. 389, doi. 10.1002/1097-0134(20000815)40:3<389::AID-PROT50>3.0.CO;2-2
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- Article
Protein structure: A new twist for hairpin turns.
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- Nature, 1985, v. 316, n. 6024, p. 102, doi. 10.1038/316102b0
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- Article
Protein design and folding: template trapping of self-assembled helical bundles.
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- Journal of Peptide Science, 2001, v. 7, n. 3, p. 146, doi. 10.1002/psc.308
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- Article
MolProbity: structure validation and all-atom contact analysis for nucleic acids and their complexes.
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- Nucleic Acids Research, 2004, v. 32, n. suppl 2, p. w615, doi. 10.1093/nar/gkh398
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- Article
Helix lap-joints as ion-binding sites: DNA-binding motifs and Ca-binding 'EF hands' are related by charge and sequence reversal.
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- Proteins, 1988, v. 4, n. 4, p. 229, doi. 10.1002/prot.340040402
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- Article
The Role of Local Backrub Motions in Evolved and Designed Mutations.
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- PLoS Computational Biology, 2012, v. 8, n. 8, p. 1, doi. 10.1371/journal.pcbi.1002629
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- Article
The simple construction of protein alpha-Carbon models.
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- Biopolymers, 1972, v. 11, n. 11, p. 2381, doi. 10.1002/bip.1972.360111116
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- Article
The bad and the good of trends in model building and refinement for sparse‐data regions: pernicious forms of overfitting versus good new tools and predictions.
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- Acta Crystallographica: Section D, Structural Biology, 2023, v. 79, n. 12, p. 1071, doi. 10.1107/S2059798323008847
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- Article
Accelerating crystal structure determination with iterative AlphaFold prediction.
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- Acta Crystallographica: Section D, Structural Biology, 2023, v. 79, n. 3, p. 234, doi. 10.1107/S205979832300102X
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- Article
Improved chemistry restraints for crystallographic refinement by integrating the Amber force field into Phenix.
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- Acta Crystallographica: Section D, Structural Biology, 2020, v. 76, n. 1, p. 51, doi. 10.1107/S2059798319015134
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- Article
Macromolecular structure determination using X‐rays, neutrons and electrons: recent developments in Phenix.
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- Acta Crystallographica: Section D, Structural Biology, 2019, v. 75, n. 10, p. 861, doi. 10.1107/S2059798319011471
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- Article
Model validation: local diagnosis, correction and when to quit.
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- Acta Crystallographica: Section D, Structural Biology, 2018, v. 74, n. 2, p. 132, doi. 10.1107/S2059798317009834
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- Article
Mismodeled purines: implicit alternates and hidden Hoogsteens.
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- Acta Crystallographica: Section D, Structural Biology, 2017, v. 73, n. 10, p. 852, doi. 10.1107/S2059798317013729
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- Article
Graphical tools for macromolecular crystallography in PHENIX.
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- Journal of Applied Crystallography, 2012, v. 45, n. 3, p. 581, doi. 10.1107/S0021889812017293
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- Article
Early ribbon drawings of proteins.
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- Nature Structural Biology, 2000, v. 7, n. 8, p. 624, doi. 10.1038/77912
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- Article
Algorithm for backrub motions in protein design.
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- Bioinformatics, 2008, v. 24, n. 13, p. i196, doi. 10.1093/bioinformatics/btn169
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- Article
Teaching molecular 3-D literacy.
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- Biochemistry & Molecular Biology Education, 2002, v. 30, n. 1, p. 21, doi. 10.1002/bmb.2002.494030010005
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- Article
Facile chemical synthesis and equilibrium unfolding properties of CopG.
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- Protein Science: A Publication of the Protein Society, 2004, v. 13, n. 7, p. 1918, doi. 10.1110/ps.04671804
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- Article
Studying and polishing the PDB's macromolecules.
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- Biopolymers, 2013, v. 99, n. 3, p. 170, doi. 10.1002/bip.22108
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- Article
The importance of residue‐level filtering and the Top2018 best‐parts dataset of high‐quality protein residues.
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- Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 1, p. 290, doi. 10.1002/pro.4239
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- Article
New tools in MolProbity validation: CaBLAM for CryoEM backbone, UnDowser to rethink "waters," and NGL Viewer to recapture online 3D graphics.
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- Protein Science: A Publication of the Protein Society, 2020, v. 29, n. 1, p. 315, doi. 10.1002/pro.3786
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- Article
MolProbity: More and better reference data for improved all-atom structure validation.
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- Protein Science: A Publication of the Protein Society, 2018, v. 27, n. 1, p. 293, doi. 10.1002/pro.3330
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- Article