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The potential of including the microbiome as biomarker in population-based health studies: methods and benefits.
Published in:
Frontiers in Public Health, 2024, p. 1, doi. 10.3389/fpubh.2024.1467121
By:
- Buytaers, Florence E.;
- Berger, Nicolas;
- Van der Heyden, Johan;
- Roosens, Nancy H. C.;
- De Keersmaecker, Sigrid C. J.
Publication type:
Article
Sheeppox virus genome sequences from the European outbreaks in Spain, Bulgaria, and Greece in 2022–2024.
Published in:
Archives of Virology, 2024, v. 169, n. 11, p. 1, doi. 10.1007/s00705-024-06165-6
By:
- Breman, Floris C.;
- Haegeman, Andy;
- Philips, Wannes;
- Krešić, Nina;
- Hoffman, Stefan;
- De Keersmaecker, Sigrid C. J.;
- Roosens, Nancy H. C.;
- Agüero, Montserrat;
- Villalba, Ruben;
- Miteva, Aleksandra;
- Ivanova, Emiliya;
- Tasioudi, Konstantia E.;
- Chaintoutis, Serafeim C.;
- Kirtzalidou, Aikaterini;
- De Regge, Nick
Publication type:
Article
The genetic structure of the Belgian population.
Published in:
Human Genomics, 2018, v. 12, p. 1, doi. 10.1186/s40246-018-0136-8
By:
- Van den Eynden, Jimmy;
- Descamps, Tine;
- Delporte, Els;
- Roosens, Nancy H. C.;
- De Keersmaecker, Sigrid C. J.;
- De Wit, Vanessa;
- Vermeesch, Joris Robert;
- Goetghebeur, Els;
- Tafforeau, Jean;
- Demarest, Stefaan;
- Van den Bulcke, Marc;
- Van Oyen, Herman
Publication type:
Article
Towards facilitated interpretation of shotgun metagenomics long-read sequencing data analyzed with KMA for the detection of bacterial pathogens and their antimicrobial resistance genes.
Published in:
Frontiers in Microbiology, 2024, p. 1, doi. 10.3389/fmicb.2024.1336532
By:
- Gand, Mathieu;
- Navickaite, Indre;
- Bartsch, Lee-Julia;
- Grützke, Josephine;
- Overballe-Petersen, Søren;
- Rasmussen, Astrid;
- Otani, Saria;
- Michelacci, Valeria;
- Rodríguez Matamoros, Bosco;
- González-Zorn, Bruno;
- Brouwer, Michael S. M.;
- Di Marcantonio, Lisa;
- Bloemen, Bram;
- Vanneste, Kevin;
- Roosens, Nancy H. C. J.;
- AbuOun, Manal;
- De Keersmaecker, Sigrid C. J.
Publication type:
Article
Strain-level characterization of foodborne pathogens without culture enrichment for outbreak investigation using shotgun metagenomics facilitated with nanopore adaptive sampling.
Published in:
Frontiers in Microbiology, 2024, p. 01, doi. 10.3389/fmicb.2024.1330814
By:
- Buytaers, Florence E.;
- Verhaegen, Bavo;
- Van Nieuwenhuysen, Tom;
- Roosens, Nancy H. C.;
- Vanneste, Kevin;
- Marchal, Kathleen;
- De Keersmaecker, Sigrid C. J.
Publication type:
Article
Strain-Level Metagenomic Data Analysis of Enriched In Vitro and In Silico Spiked Food Samples: Paving the Way towards a Culture-Free Foodborne Outbreak Investigation Using STEC as a Case Study.
Published in:
International Journal of Molecular Sciences, 2020, v. 21, n. 16, p. 5688, doi. 10.3390/ijms21165688
By:
- Saltykova, Assia;
- Buytaers, Florence E.;
- Denayer, Sarah;
- Verhaegen, Bavo;
- Piérard, Denis;
- Roosens, Nancy H. C.;
- Marchal, Kathleen;
- De Keersmaecker, Sigrid C. J.
Publication type:
Article
Use of Whole Genome Sequencing Data for a First in Silico Specificity Evaluation of the RT-qPCR Assays Used for SARS-CoV-2 Detection.
Published in:
International Journal of Molecular Sciences, 2020, v. 21, n. 15, p. 5585, doi. 10.3390/ijms21155585
By:
- Gand, Mathieu;
- Vanneste, Kevin;
- Thomas, Isabelle;
- Van Gucht, Steven;
- Capron, Arnaud;
- Herman, Philippe;
- Roosens, Nancy H. C.;
- De Keersmaecker, Sigrid C. J.
Publication type:
Article
Development of an NGS-Based Workflow for Improved Monitoring of Circulating Plasmids in Support of Risk Assessment of Antimicrobial Resistance Gene Dissemination.
Published in:
Antibiotics (2079-6382), 2020, v. 9, n. 8, p. 503, doi. 10.3390/antibiotics9080503
By:
- Berbers, Bas;
- Ceyssens, Pieter-Jan;
- Bogaerts, Pierre;
- Vanneste, Kevin;
- Roosens, Nancy H. C.;
- Marchal, Kathleen;
- De Keersmaecker, Sigrid C. J.
Publication type:
Article
Metagenomic Characterization of Multiple Genetically Modified Bacillus Contaminations in Commercial Microbial Fermentation Products.
Published in:
Life (2075-1729), 2022, v. 12, n. 12, p. 1971, doi. 10.3390/life12121971
By:
- D'aes, Jolien;
- Fraiture, Marie-Alice;
- Bogaerts, Bert;
- De Keersmaecker, Sigrid C. J.;
- Roosens, Nancy H. C. J.;
- Vanneste, Kevin
Publication type:
Article
Population Analysis of O26 Shiga Toxin-Producing Escherichia coli Causing Hemolytic Uremic Syndrome in Italy, 1989–2020, Through Whole Genome Sequencing.
Published in:
Frontiers in Cellular & Infection Microbiology, 2022, v. 12, p. 1, doi. 10.3389/fcimb.2022.842508
By:
- Michelacci, Valeria;
- Montalbano Di Filippo, Margherita;
- Gigliucci, Federica;
- Arancia, Silvia;
- Chiani, Paola;
- Minelli, Fabio;
- Roosens, Nancy H. C.;
- De Keersmaecker, Sigrid C. J.;
- Bogaerts, Bert;
- Vanneste, Kevin;
- Morabito, Stefano
Publication type:
Article
A systematic review and meta-analysis of host genetic factors associated with influenza severity.
Published in:
BMC Genomics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12864-021-08240-7
By:
- Van Goethem, Nina;
- Danwang, Célestin;
- Bossuyt, Nathalie;
- Van Oyen, Herman;
- Roosens, Nancy H. C.;
- Robert, Annie
Publication type:
Article
Whole-Genome Sequence Approach and Phylogenomic Stratification Improve the Association Analysis of Mutations With Patient Data in Influenza Surveillance.
Published in:
Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.809887
By:
- Van Poelvoorde, Laura;
- Vanneste, Kevin;
- De Keersmaecker, Sigrid C. J.;
- Thomas, Isabelle;
- Van Goethem, Nina;
- Van Gucht, Steven;
- Saelens, Xavier;
- Roosens, Nancy H. C.
Publication type:
Article
Whole-Genome Sequencing-Based Antimicrobial Resistance Characterization and Phylogenomic Investigation of 19 Multidrug-Resistant and Extended-Spectrum Beta-Lactamase-Positive Escherichia coli Strains Collected From Hospital Patients in Benin in 2019.
Published in:
Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.752883
By:
- Yehouenou, Carine Laurence;
- Bogaerts, Bert;
- De Keersmaecker, Sigrid C. J.;
- Roosens, Nancy H. C.;
- Marchal, Kathleen;
- Tchiakpe, Edmond;
- Affolabi, Dissou;
- Simon, Anne;
- Dossou, Francis Moise;
- Vanneste, Kevin;
- Dalleur, Olivia
Publication type:
Article
Towards Real-Time and Affordable Strain-Level Metagenomics-Based Foodborne Outbreak Investigations Using Oxford Nanopore Sequencing Technologies.
Published in:
Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.738284
By:
- Buytaers, Florence E.;
- Saltykova, Assia;
- Denayer, Sarah;
- Verhaegen, Bavo;
- Vanneste, Kevin;
- Roosens, Nancy H. C.;
- Piérard, Denis;
- Marchal, Kathleen;
- De Keersmaecker, Sigrid C. J.
Publication type:
Article
Whole Genome Sequencing Provides an Added Value to the Investigation of Staphylococcal Food Poisoning Outbreaks.
Published in:
Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.750278
By:
- Nouws, Stéphanie;
- Bogaerts, Bert;
- Verhaegen, Bavo;
- Denayer, Sarah;
- Laeremans, Lasse;
- Marchal, Kathleen;
- Roosens, Nancy H. C.;
- Vanneste, Kevin;
- De Keersmaecker, Sigrid C. J.
Publication type:
Article
Strategy and Performance Evaluation of Low-Frequency Variant Calling for SARS-CoV-2 Using Targeted Deep Illumina Sequencing.
Published in:
Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.747458
By:
- Van Poelvoorde, Laura A. E.;
- Delcourt, Thomas;
- Coucke, Wim;
- Herman, Philippe;
- De Keersmaecker, Sigrid C. J.;
- Saelens, Xavier;
- Roosens, Nancy H. C.;
- Vanneste, Kevin
Publication type:
Article
MLVA as a Tool for Public Health Surveillance of Human Salmonella Typhimurium: Prospective Study in Belgium and Evaluation of MLVA Loci Stability.
Published in:
PLoS ONE, 2013, v. 8, n. 12, p. 1, doi. 10.1371/journal.pone.0084055
By:
- Wuyts, Véronique;
- Mattheus, Wesley;
- De Laminne de Bex, Guillaume;
- Wildemauwe, Christa;
- Roosens, Nancy H. C.;
- Marchal, Kathleen;
- De Keersmaecker, Sigrid C. J.;
- Bertrand, Sophie
Publication type:
Article
Assessment of the Feasibility of a Future Integrated Larger-Scale Epidemiological Study to Evaluate Health Risks of Air Pollution Episodes in Children.
Published in:
International Journal of Environmental Research & Public Health, 2022, v. 19, n. 14, p. 8531, doi. 10.3390/ijerph19148531
By:
- Nauwelaerts, Sarah J. D.;
- De Cremer, Koen;
- Bustos Sierra, Natalia;
- Gand, Mathieu;
- Van Geel, Dirk;
- Delvoye, Maud;
- Vandermassen, Els;
- Vercauteren, Jordy;
- Stroobants, Christophe;
- Bernard, Alfred;
- Saenen, Nelly D.;
- Nawrot, Tim S.;
- Roosens, Nancy H. C.;
- De Keersmaecker, Sigrid C. J.
Publication type:
Article
Benchmarking bacterial taxonomic classification using nanopore metagenomics data of several mock communities.
Published in:
Scientific Data, 2024, v. 11, n. 1, p. 1, doi. 10.1038/s41597-024-03672-8
By:
- Van Uffelen, Alexander;
- Posadas, Andrés;
- Roosens, Nancy H. C.;
- Marchal, Kathleen;
- De Keersmaecker, Sigrid C. J.;
- Vanneste, Kevin
Publication type:
Article
Transforming Shiga toxin-producing Escherichia coli surveillance through whole genome sequencing in food safety practices.
Published in:
Frontiers in Microbiology, 2023, p. 1, doi. 10.3389/fmicb.2023.1204630
By:
- Nouws, Stéphanie;
- Verhaegen, Bavo;
- Denayer, Sarah;
- Crombé, Florence;
- Piérard, Denis;
- Bogaerts, Bert;
- Vanneste, Kevin;
- Marchal, Kathleen;
- Roosens, Nancy H. C.;
- De Keersmaecker, Sigrid C. J.
Publication type:
Article
Retrospective surveillance of viable Bacillus cereus group contaminations in commercial food and feed vitamin B2 products sold on the Belgian market using whole-genome sequencing.
Published in:
Frontiers in Microbiology, 2023, p. 1, doi. 10.3389/fmicb.2023.1173594
By:
- Bogaerts, Bert;
- Fraiture, Marie-Alice;
- Huwaert, Astrid;
- Van Nieuwenhuysen, Tom;
- Jacobs, Bram;
- Van Hoorde, Koenraad;
- De Keersmaecker, Sigrid C. J.;
- Roosens, Nancy H. C.;
- Vanneste, Kevin
Publication type:
Article
Correction to: FEDA (Food Enzyme Database): a web application gathering information about food enzyme preparations available on the European market.
Published in:
2022
By:
- Deckers, Marie;
- Braekel, Julien Van;
- Vanneste, Kevin;
- Deforce, Dieter;
- Fraiture, Marie-Alice;
- Roosens, Nancy H C
Publication type:
Correction Notice
Coverage of the national surveillance system for human Salmonella infections, Belgium, 2016-2020.
Published in:
PLoS ONE, 2021, v. 16, n. 8, p. 1, doi. 10.1371/journal.pone.0256820
By:
- Van Goethem, Nina;
- Van Den Bossche, An;
- Ceyssens, Pieter-Jan;
- Lajot, Adrien;
- Coucke, Wim;
- Vernelen, Kris;
- Roosens, Nancy H. C.;
- De Keersmaecker, Sigrid C. J.;
- Van Cauteren, Dieter;
- Mattheus, Wesley
Publication type:
Article
Genomic comparison between Mycobacterium bovis and Mycobacterium microti and in silico analysis of peptide-based biomarkers for serodiagnosis.
Published in:
Frontiers in Veterinary Science, 2024, p. 1, doi. 10.3389/fvets.2024.1446930
By:
- Moens, Charlotte;
- Bogaerts, Bert;
- Lorente-Leal, Victor;
- Vanneste, Kevin;
- De Keersmaecker, Sigrid C. J.;
- Roosens, Nancy H. C.;
- Mostin, Laurent;
- Fretin, David;
- Marché, Sylvie
Publication type:
Article
Whole-Genome Sequencing-Based Screening of MRSA in Patients and Healthcare Workers in Public Hospitals in Benin.
Published in:
Microorganisms, 2023, v. 11, n. 8, p. 1954, doi. 10.3390/microorganisms11081954
By:
- Laurence Yehouenou, Carine;
- Bogaerts, Bert;
- Vanneste, Kevin;
- De Keersmaecker, Sigrid C. J.;
- Roosens, Nancy H. C.;
- Kpangon, Arsène A.;
- Affolabi, Dissou;
- Simon, Anne;
- Dossou, Francis Moise;
- Dalleur, Olivia
Publication type:
Article
Development of a Droplet Digital PCR to Monitor SARS-CoV-2 Omicron Variant BA.2 in Wastewater Samples.
Published in:
Microorganisms, 2023, v. 11, n. 3, p. 729, doi. 10.3390/microorganisms11030729
By:
- Van Poelvoorde, Laura A. E.;
- Picalausa, Corinne;
- Gobbo, Andrea;
- Verhaegen, Bavo;
- Lesenfants, Marie;
- Herman, Philippe;
- Van Hoorde, Koenraad;
- Roosens, Nancy H. C.
Publication type:
Article
Non-Invasive versus Invasive Samples for Zika Virus Surveillance: A Comparative Study in New Caledonia and French Guiana in 2015–2016.
Published in:
Microorganisms, 2021, v. 9, n. 6, p. 1312, doi. 10.3390/microorganisms9061312
By:
- Fraiture, Marie-Alice;
- Coucke, Wim;
- Pol, Morgane;
- Rousset, Dominique;
- Gourinat, Ann-Claire;
- Biron, Antoine;
- Broeders, Sylvia;
- Vandermassen, Els;
- Dupont-Rouzeyrol, Myrielle;
- Roosens, Nancy H. C.
Publication type:
Article
Phylogenomic Investigation of Increasing Fluoroquinolone Resistance among Belgian Cases of Shigellosis between 2013 and 2018 Indicates Both Travel-Related Imports and Domestic Circulation.
Published in:
Microorganisms, 2021, v. 9, n. 4, p. 767, doi. 10.3390/microorganisms9040767
By:
- Bogaerts, Bert;
- Winand, Raf;
- Van Braekel, Julien;
- Mattheus, Wesley;
- De Keersmaecker, Sigrid C. J.;
- Roosens, Nancy H. C.;
- Marchal, Kathleen;
- Vanneste, Kevin;
- Ceyssens, Pieter-Jan
Publication type:
Article
A Practical Method to Implement Strain-Level Metagenomics-Based Foodborne Outbreak Investigation and Source Tracking in Routine.
Published in:
Microorganisms, 2020, v. 8, n. 8, p. 1191, doi. 10.3390/microorganisms8081191
By:
- Buytaers, Florence E.;
- Saltykova, Assia;
- Denayer, Sarah;
- Verhaegen, Bavo;
- Vanneste, Kevin;
- Roosens, Nancy H. C.;
- Piérard, Denis;
- Marchal, Kathleen;
- De Keersmaecker, Sigrid C. J.
Publication type:
Article
Identification of an unauthorized genetically modified bacteria in food enzyme through whole-genome sequencing.
Published in:
Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-63987-5
By:
- Fraiture, Marie-Alice;
- Bogaerts, Bert;
- Winand, Raf;
- Deckers, Marie;
- Papazova, Nina;
- Vanneste, Kevin;
- De Keersmaecker, Sigrid C. J.;
- Roosens, Nancy H. C.
Publication type:
Article
Combining short and long read sequencing to characterize antimicrobial resistance genes on plasmids applied to an unauthorized genetically modified Bacillus.
Published in:
Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-61158-0
By:
- Berbers, Bas;
- Saltykova, Assia;
- Garcia-Graells, Cristina;
- Philipp, Patrick;
- Arella, Fabrice;
- Marchal, Kathleen;
- Winand, Raf;
- Vanneste, Kevin;
- Roosens, Nancy H. C.;
- De Keersmaecker, Sigrid C. J.
Publication type:
Article
Comparison of 6 DNA extraction methods for isolation of high yield of high molecular weight DNA suitable for shotgun metagenomics Nanopore sequencing to detect bacteria.
Published in:
BMC Genomics, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s12864-023-09537-5
By:
- Gand, Mathieu;
- Bloemen, Bram;
- Vanneste, Kevin;
- Roosens, Nancy H. C.;
- De Keersmaecker, Sigrid C. J.
Publication type:
Article
Development and validation of an integrated DNA walking strategy to detect GMO expressing cry genes.
Published in:
BMC Biotechnology, 2018, v. 18, n. 1, p. N.PAG, doi. 10.1186/s12896-018-0446-x
By:
- Fraiture, Marie-Alice;
- Vandamme, Julie;
- Herman, Philippe;
- Roosens, Nancy H. C.
Publication type:
Article
Development of a Taxon-Specific Real-Time Polymerase Chain Reaction Method to Detect Trichoderma reesei Contaminations in Fermentation Products.
Published in:
Fermentation (Basel), 2023, v. 9, n. 11, p. 926, doi. 10.3390/fermentation9110926
By:
- Fraiture, Marie-Alice;
- Gobbo, Andrea;
- Papazova, Nina;
- Roosens, Nancy H. C.
Publication type:
Article
Development of a Taxon-Specific Real-Time PCR Method Targeting the Bacillus subtilis Group to Strengthen the Control of Genetically Modified Bacteria in Fermentation Products.
Published in:
Fermentation (Basel), 2022, v. 8, n. 6, p. 78, doi. 10.3390/fermentation8020078
By:
- Fraiture, Marie-Alice;
- Gobbo, Andrea;
- Papazova, Nina;
- Roosens, Nancy H. C.
Publication type:
Article
Development of a Taxon-Specific Real-Time PCR Method Targeting the Bacillus subtilis Group to Strengthen the Control of Genetically Modified Bacteria in Fermentation Products.
Published in:
Fermentation (Basel), 2022, v. 8, n. 2, p. 78, doi. 10.3390/fermentation8020078
By:
- Fraiture, Marie-Alice;
- Gobbo, Andrea;
- Papazova, Nina;
- Roosens, Nancy H. C.
Publication type:
Article
The use of comparative genome analysis and syntenic relationships allows extrapolating the position of Zn tolerance QTL regions from Arabidopsis halleri into Arabidopsis thaliana.
Published in:
Plant & Soil, 2008, v. 306, n. 1/2, p. 105, doi. 10.1007/s11104-007-9383-5
By:
- Roosens, Nancy H. C. J.;
- Willems, Glenda;
- Godé, Cécile;
- Courseaux, Adeline;
- Saumitou-Laprade, Pierre
Publication type:
Article
Optimization and Application of a Multiplex Digital PCR Assay for the Detection of SARS-CoV-2 Variants of Concern in Belgian Influent Wastewater.
Published in:
Viruses (1999-4915), 2022, v. 14, n. 3, p. 610, doi. 10.3390/v14030610
By:
- Boogaerts, Tim;
- Van den Bogaert, Siel;
- Van Poelvoorde, Laura A. E.;
- El Masri, Diala;
- De Roeck, Naomi;
- Roosens, Nancy H. C.;
- Lesenfants, Marie;
- Lahousse, Lies;
- Van Hoorde, Koenraad;
- van Nuijs, Alexander L. N.;
- Delputte, Peter
Publication type:
Article
Gender‐dependent association between exhaled nitric oxide and the CC16 38AA genotype in young school children.
Published in:
Immunity, Inflammation & Disease, 2020, v. 8, n. 4, p. 497, doi. 10.1002/iid3.332
By:
- Nauwelaerts, Sarah J. D.;
- Roosens, Nancy H. C.;
- De Cremer, Koen;
- Bernard, Alfred;
- De Keersmaecker, Sigrid C. J.
Publication type:
Article
Shifting national surveillance of Shigella infections toward geno‐serotyping by the development of a tailored Luminex assay and NGS workflow.
Published in:
MicrobiologyOpen, 2019, v. 8, n. 8, p. N.PAG, doi. 10.1002/mbo3.807
By:
- Ventola, Eleonora;
- Bogaerts, Bert;
- De Keersmaecker, Sigrid C. J.;
- Vanneste, Kevin;
- Roosens, Nancy H. C.;
- Mattheus, Wesley;
- Ceyssens, Pieter‐Jan
Publication type:
Article
Development of a multiplex mass spectrometry method for simultaneous quantification of urinary proteins related to respiratory health.
Published in:
Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-89068-9
By:
- Nauwelaerts, Sarah J. D.;
- Roosens, Nancy H. C.;
- Bernard, Alfred;
- De Keersmaecker, Sigrid C. J.;
- De Cremer, Koen
Publication type:
Article
Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates.
Published in:
Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-71207-3
By:
- Nouws, Stéphanie;
- Bogaerts, Bert;
- Verhaegen, Bavo;
- Denayer, Sarah;
- Piérard, Denis;
- Marchal, Kathleen;
- Roosens, Nancy H. C.;
- Vanneste, Kevin;
- De Keersmaecker, Sigrid C. J.
Publication type:
Article
Selection of a Noninvasive Source of Human DNA Envisaging Genotyping Assays in Epidemiological Studies: Urine or Saliva?
Published in:
Journal of Biomolecular Techniques, 2020, v. 31, n. 1, p. 27, doi. 10.7171/jbt.20-3101-004
By:
- Nauwelaerts, Sarah J. D.;
- Van Geel, Dirk;
- Delvoye, Maud;
- De Cremer, Koen;
- Bernard, Alfred;
- Roosens, Nancy H. C.;
- De Keersmaecker, Sigrid C. J.
Publication type:
Article
Comparative Study of Seven Commercial Kits for Human DNA Extraction from Urine Samples Suitable for DNA Biomarker-Based Public Health Studies.
Published in:
Journal of Biomolecular Techniques, 2014, v. 25, n. 4, p. 96, doi. 10.7171/jbt.14-2504-002
By:
- El Bali, Latifa;
- Diman, Aurélie;
- Bernard, Alfred;
- Roosens, Nancy H. C.;
- De Keersmaecker, Sigrid C. J.
Publication type:
Article
Status and potential of bacterial genomics for public health practice: a scoping review.
Published in:
2019
By:
- Van Goethem, Nina;
- Descamps, Tine;
- Devleesschauwer, Brecht;
- Roosens, Nancy H. C.;
- Boon, Nele A. M.;
- Van Oyen, Herman;
- Robert, Annie
Publication type:
journal article
A novel genotoxin-specific qPCR array based on the metabolically competent human HepaRG™ cell line as a rapid and reliable tool for improved in vitro hazard assessment.
Published in:
Archives of Toxicology, 2018, v. 92, n. 4, p. 1593, doi. 10.1007/s00204-018-2172-5
By:
- Ates, Gamze;
- Mertens, Birgit;
- Heymans, Anja;
- Verschaeve, Luc;
- Milushev, Dimiter;
- Vanparys, Philippe;
- Roosens, Nancy H. C.;
- De Keersmaecker, Sigrid C. J.;
- Rogiers, Vera;
- Doktorova, Tatyana Y.
Publication type:
Article
Evaluation of the added value of viral genomic information for predicting severity of influenza infection.
Published in:
2021
By:
- Van Goethem, Nina;
- Robert, Annie;
- Bossuyt, Nathalie;
- Van Poelvoorde, Laura A. E.;
- Quoilin, Sophie;
- De Keersmaecker, Sigrid C. J.;
- Devleesschauwer, Brecht;
- Thomas, Isabelle;
- Vanneste, Kevin;
- Roosens, Nancy H. C.;
- Van Oyen, Herman
Publication type:
journal article
First detection of a plasmid-encoded New-Delhi metallo-beta-lactamase-1 (NDM-1) producing Acinetobacter baumannii using whole genome sequencing, isolated in a clinical setting in Benin.
Published in:
Annals of Clinical Microbiology & Antimicrobials, 2021, v. 20, n. 1, p. 1, doi. 10.1186/s12941-020-00411-w
By:
- Yehouenou, Carine;
- Bogaerts, Bert;
- Vanneste, Kevin;
- Roosens, Nancy H. C.;
- De Keersmaecker, Sigrid C. J.;
- Marchal, Kathleen;
- Affolabi, Dissou;
- Soleimani, Reza;
- Rodriguez-Villalobos, Hector;
- Van Bambeke, Françoise;
- Dalleur, Olivia;
- Simon, Anne
Publication type:
Article
Deepening of In Silico Evaluation of SARS-CoV-2 Detection RT-qPCR Assays in the Context of New Variants.
Published in:
Genes, 2021, v. 12, n. 4, p. 565, doi. 10.3390/genes12040565
By:
- Gand, Mathieu;
- Vanneste, Kevin;
- Thomas, Isabelle;
- Van Gucht, Steven;
- Capron, Arnaud;
- Herman, Philippe;
- Roosens, Nancy H. C.;
- De Keersmaecker, Sigrid C. J.
Publication type:
Article
Large diversity of linezolid-resistant isolates discovered in food-producing animals through linezolid selective monitoring in Belgium in 2019.
Published in:
2022
By:
- Timmermans, Michaël;
- Bogaerts, Bert;
- Vanneste, Kevin;
- Keersmaecker, Sigrid C J De;
- Roosens, Nancy H C;
- Kowalewicz, Carole;
- Simon, Guillaume;
- Argudín, Maria A;
- Deplano, Ariane;
- Hallin, Marie;
- Wattiau, Pierre;
- Fretin, David;
- Denis, Olivier;
- Boland, Cécile;
- De Keersmaecker, Sigrid C J
Publication type:
journal article

Found: 63