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Genomic Epidemiology of Severe Acute Respiratory Syndrome Coronavirus 2, Colombia.
Published in:
2020
By:
- Laiton-Donato, Katherine;
- Villabona-Arenas, Christian Julián;
- Usme-Ciro, José A.;
- Franco-Muñoz, Carlos;
- Álvarez-Díaz, Diego A.;
- Villabona-Arenas, Liz Stephany;
- Echeverría-Londoño, Susy;
- Cucunubá, Zulma M.;
- Franco-Sierra, Nicolás D.;
- Flórez, Astrid C.;
- Ferro, Carolina;
- Ajami, Nadim J.;
- Walteros, Diana Marcela;
- Prieto, Franklin;
- Durán, Carlos Andrés;
- Ospina-Martínez, Martha Lucia;
- Mercado-Reyes, Marcela
Publication type:
journal article
Survey of Ebola Viruses in Frugivorous and Insectivorous Bats in Guinea, Cameroon, and the Democratic Republic of the Congo, 2015-2017.
Published in:
2018
By:
- De Nys, Helene M.;
- Kingebeni, Placide Mbala;
- Keita, Alpha K.;
- Butel, Christelle;
- Thaurignac, Guillaume;
- Villabona-Arenas, Christian-Julian;
- Lemarcis, Thomas;
- Geraerts, Mare;
- Vidal, Nicole;
- Esteban, Amandine;
- Bourgarel, Mathieu;
- Roger, François;
- Leendertz, Fabian;
- Diallo, Ramadan;
- Ndimbo-Kumugo, Simon-Pierre;
- Nsio-Mbeta, Justus;
- Tagg, Nikki;
- Koivogui, Lamine;
- Toure, Abdoulaye;
- Delaporte, Eric
Publication type:
journal article
Multiplex detection of antibodies to Chikungunya, O'nyong-nyong, Zika, Dengue, West Nile and Usutu viruses in diverse non-human primate species from Cameroon and the Democratic Republic of Congo.
Published in:
PLoS Neglected Tropical Diseases, 2021, v. 15, n. 1, p. 1, doi. 10.1371/journal.pntd.0009028
By:
- Raulino, Raisa;
- Thaurignac, Guillaume;
- Butel, Christelle;
- Villabona-Arenas, Christian Julian;
- Foe, Thomas;
- Loul, Severin;
- Ndimbo-Kumugo, Simon-Pierre;
- Mbala-Kingebeni, Placide;
- Makiala-Mandanda, Sheila;
- Ahuka-Mundeke, Steve;
- Kerkhof, Karen;
- Delaporte, Eric;
- Ariën, Kevin K.;
- Foulongne, Vincent;
- Mpoudi Ngole, Eitel;
- Peeters, Martine;
- Ayouba, Ahidjo
Publication type:
Article
Epidemiological and ecological determinants of Zika virus transmission in an urban setting.
Published in:
eLife, 2017, p. 1, doi. 10.7554/eLife.29820
By:
- Lourenço, José;
- de Lima, Maricelia Maia;
- Faria, Nuno Rodrigues;
- Walker, Andrew;
- Kraemer, Moritz U. G.;
- Villabona-Arenas, Christian Julian;
- Lambert, Ben;
- de Cerqueira, Erenilde Marques;
- Pybus, Oliver G.;
- Alcantara, Luiz C. J.;
- Recker, Mario
Publication type:
Article
Publisher Correction: Characterising within-hospital SARS-CoV-2 transmission events using epidemiological and viral genomic data across two pandemic waves.
Published in:
2022
By:
- Lindsey, Benjamin B.;
- Villabona-Arenas, Ch. Julián;
- Campbell, Finlay;
- Keeley, Alexander J.;
- Parker, Matthew D.;
- Shah, Dhruv R.;
- Parsons, Helena;
- Zhang, Peijun;
- Kakkar, Nishchay;
- Gallis, Marta;
- Foulkes, Benjamin H.;
- Wolverson, Paige;
- Louka, Stavroula F.;
- Christou, Stella;
- State, Amy;
- Johnson, Katie;
- Raza, Mohammad;
- Hsu, Sharon;
- Jombart, Thibaut;
- Cori, Anne
Publication type:
Correction Notice
Characterising within-hospitalSARS-CoV-2 transmission events using epidemiological and viral genomic data across two pandemic waves.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-28681-2
By:
- Lindsey, Benjamin B.;
- Villabona-Arenas, Ch. Julián;
- Campbell, Finlay;
- Keeley, Alexander J.;
- Parker, Matthew D.;
- Shah, Dhruv R.;
- Parsons, Helena;
- Zhang, Peijun;
- Kakkar, Nishchay;
- Gallis, Marta;
- Foulkes, Benjamin H.;
- Wolverson, Paige;
- Louka, Stavroula F.;
- Christou, Stella;
- State, Amy;
- Johnson, Katie;
- Raza, Mohammad;
- Hsu, Sharon;
- Jombart, Thibaut;
- Cori, Anne
Publication type:
Article
Dengue Vaccine: Considerations before Rollout in Colombia.
Published in:
PLoS Neglected Tropical Diseases, 2016, v. 10, n. 6, p. 1, doi. 10.1371/journal.pntd.0004653
By:
- Villabona-Arenas, Christian Julian;
- Ocazionez Jimenez, Raquel Elvira;
- Jimenez Silva, Cinthy Lorena
Publication type:
Article
Reconstructing the early global dynamics of under-ascertained COVID-19 cases and infections.
Published in:
2020
By:
- Russell, Timothy W.;
- Golding, Nick;
- Hellewell, Joel;
- Abbott, Sam;
- Wright, Lawrence;
- Pearson, Carl A. B.;
- van Zandvoort, Kevin;
- Jarvis, Christopher I.;
- Gibbs, Hamish;
- Liu, Yang;
- Eggo, Rosalind M.;
- Edmunds, W. John;
- Kucharski, Adam J.;
- on behalf of the CMMID COVID-19 working group;
- Deol, Arminder K.;
- Villabona-Arenas, C. Julian;
- Jombart, Thibaut;
- O'Reilly, Kathleen;
- Munday, James D.;
- Meakin, Sophie R.
Publication type:
journal article
Response strategies for COVID-19 epidemics in African settings: a mathematical modelling study.
Published in:
2020
By:
- van Zandvoort, Kevin;
- Jarvis, Christopher I.;
- Pearson, Carl A. B.;
- Davies, Nicholas G.;
- CMMID COVID-19 working group;
- Nightingale, Emily S.;
- Munday, James D.;
- Gimma, Amy;
- Rosello, Alicia;
- Villabona-Arenas, Julian;
- Funk, Sebastian;
- Atkins, Katherine E.;
- Diamond, Charlie;
- Meakin, Sophie R.;
- Procter, Simon R.;
- Sun, Fiona Yueqian;
- Endo, Akira;
- Tully, Damien C.;
- Rees, Eleanor M.;
- Deol, Arminder K.
Publication type:
journal article
Dengue Virus Type 3 Adaptive Changes during Epidemics in São Jose de Rio Preto, Brazil, 2006–2007
Published in:
PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0063496
By:
- Villabona-Arenas, Christian Julian;
- Mondini, Adriano;
- Bosch, Irene;
- Schimitt, Diane;
- Calzavara-Silva, Carlos E.;
- de A Zanotto, Paolo M.;
- Nogueira, Maurício L.
Publication type:
Article
Worldwide Spread of Dengue Virus Type 1
Published in:
PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0062649
By:
- Villabona-Arenas, Christian Julián;
- Zanotto, Paolo Marinho de Andrade
Publication type:
Article
Using machine learning and big data to explore the drug resistance landscape in HIV.
Published in:
PLoS Computational Biology, 2021, v. 17, n. 8, p. 1, doi. 10.1371/journal.pcbi.1008873
By:
- Blassel, Luc;
- Tostevin, Anna;
- Villabona-Arenas, Christian Julian;
- Peeters, Martine;
- Hué, Stéphane;
- Gascuel, Olivier
Publication type:
Article
Outbreak of Human Parvovirus B19 Hidden by Dengue Fever.
Published in:
Clinical Infectious Diseases, 2019, v. 68, n. 5, p. 810, doi. 10.1093/cid/ciy630
By:
- Paola, Nicholas Di;
- Mesquita, Flávio S;
- Oliveira, Danielle Bruna Leal de;
- Villabona-Arenas, Christian Julián;
- Pour, Shahab Zaki;
- Sousa-Capra, Carla de;
- Lopes, Gabriela Pessanha;
- Santana, Rubia Anita Ferraz;
- Pinho, João Renato Rebello;
- Balarini, Karime;
- Fonseca, Celso Ricardo Theoto Pereira da;
- Zanotto, Paolo Marinho de Andrade
Publication type:
Article
Rapid Confirmation of the Zaire Ebola Virus in the Outbreak of the Equateur Province in the Democratic Republic of Congo: Implications for Public Health Interventions.
Published in:
Clinical Infectious Diseases, 2019, v. 68, n. 2, p. 330, doi. 10.1093/cid/ciy527
By:
- Mbala-Kingebeni, Placide;
- Villabona-Arenas, Christian-Julian;
- Vidal, Nicole;
- Likofata, Jacques;
- Nsio-Mbeta, Justus;
- Makiala-Mandanda, Sheila;
- Mukadi, Daniel;
- Mukadi, Patrick;
- Kumakamba, Charles;
- Djokolo, Bathe;
- Ayouba, Ahidjo;
- Delaporte, Eric;
- Peeters, Martine;
- Tamfum, Jean-Jacques Muyembe;
- Ahuka-Mundeke, Steve
Publication type:
Article
Detection Of Four Dengue Serotypes Suggests Rise In Hyperendemicity In Urban Centers Of Brazil.
Published in:
PLoS Neglected Tropical Diseases, 2014, v. 8, n. 2, p. 1, doi. 10.1371/journal.pntd.0002620
By:
- Villabona-Arenas, Christian Julián;
- de Oliveira, Jessica Luana;
- Capra, Carla de Sousa;
- Balarini, Karime;
- Loureiro, Mauricio;
- Fonseca, Celso Ricardo Theoto P.;
- Passos, Saulo Duarte;
- Zanotto, Paolo Marinho de Andrade
Publication type:
Article
Detection Of Four Dengue Serotypes Suggests Rise In Hyperendemicity In Urban Centers Of Brazil.
Published in:
2014
By:
- Villabona-Arenas, Christian Julián;
- de Oliveira, Jessica Luana;
- Capra, Carla de Sousa;
- Balarini, Karime;
- Loureiro, Mauricio;
- Fonseca, Celso Ricardo Theoto P.;
- Passos, Saulo Duarte;
- Zanotto, Paolo Marinho de Andrade
Publication type:
Opinion
Comparative assessment of methods for short-term forecasts of COVID-19 hospital admissions in England at the local level.
Published in:
2022
By:
- Meakin, Sophie;
- Abbott, Sam;
- Bosse, Nikos;
- Munday, James;
- Gruson, Hugo;
- Hellewell, Joel;
- Sherratt, Katharine;
- CMMID COVID-19 Working Group;
- Chapman, Lloyd A. C.;
- Prem, Kiesha;
- Klepac, Petra;
- Jombart, Thibaut;
- Knight, Gwenan M.;
- Jafari, Yalda;
- Flasche, Stefan;
- Waites, William;
- Jit, Mark;
- Eggo, Rosalind M.;
- Villabona-Arenas, C. Julian;
- Russell, Timothy W.
Publication type:
journal article
Estimating the impact of reopening schools on the reproduction number of SARS-CoV-2 in England, using weekly contact survey data.
Published in:
2021
By:
- Munday, James D.;
- Jarvis, Christopher I.;
- Gimma, Amy;
- Wong, Kerry L. M.;
- van Zandvoort, Kevin;
- CMMID COVID-19 Working Group;
- Liu, Yang;
- Hellewell, Joel;
- Davies, Nicholas G.;
- Villabona-Arenas, C. Julian;
- Eggo, Rosalind M.;
- Endo, Akira;
- Bosse, Nikos I.;
- Gibbs, Hamish P.;
- Pearson, Carl A. B.;
- Sun, Fiona Yueqian;
- Jit, Mark;
- O'Reilly, Kathleen;
- Jafari, Yalda;
- Atkins, Katherine E.
Publication type:
Journal Article
The impact of non-pharmaceutical interventions on SARS-CoV-2 transmission across 130 countries and territories.
Published in:
2021
By:
- Liu, Yang;
- Morgenstern, Christian;
- Kelly, James;
- Lowe, Rachel;
- CMMID COVID-19 Working Group;
- Munday, James;
- Villabona-Arenas, C. Julian;
- Gibbs, Hamish;
- Pearson, Carl A. B.;
- Prem, Kiesha;
- Leclerc, Quentin J.;
- Meakin, Sophie R.;
- Edmunds, W. John;
- Jarvis, Christopher I.;
- Gimma, Amy;
- Funk, Sebastian;
- Quaife, Matthew;
- Russell, Timothy W.;
- Emory, Jon C.;
- Abbott, Sam
Publication type:
journal article
Evolutionary history and spatio-temporal dynamics of dengue virus serotypes in an endemic region of Colombia.
Published in:
PLoS ONE, 2018, v. 13, n. 8, p. 1, doi. 10.1371/journal.pone.0203090
By:
- Jiménez-Silva, Cinthy L.;
- Carreño, María Fernanda;
- Ortiz-Baez, Ayda Susana;
- Rey, Luz Aida;
- Villabona-Arenas, Christian Julián;
- Ocazionez, Raquel E.
Publication type:
Article
Extensive Serological Survey of Multiple African Nonhuman Primate Species Reveals Low Prevalence of Immunoglobulin G Antibodies to 4 Ebola Virus Species.
Published in:
2019
By:
- Ayouba, Ahidjo;
- Ahuka-Mundeke, Steve;
- Butel, Christelle;
- Kingebeni, Placide Mbala;
- Loul, Severin;
- Tagg, Nikki;
- Villabona-Arenas, Christian-Julian;
- Lacroix, Audrey;
- Ndimbo-Kumugo, Simon-Pierre;
- Keita, Alpha K;
- Toure, Abdoulaye;
- Couacy-Hymann, Emmanuel;
- Calvignac-Spencer, Sebastien;
- Leendertz, Fabian H;
- Formenty, Pierre;
- Delaporte, Eric;
- Muyembe-Tamfum, Jean-Jacques;
- Ngole, Eitel Mpoudi;
- Peeters, Martine;
- Mbala Kingebeni, Placide
Publication type:
journal article
Phylogeny of dengue virus type 3 circulating in Colombia between 2001 and 2007.
Published in:
Tropical Medicine & International Health, 2009, v. 14, n. 10, p. 1241, doi. 10.1111/j.1365-3156.2009.02339.x
By:
- Villabona-Arenas, Christian Julián;
- Miranda-Esquivel, Daniel Rafael;
- Jimenez, Raquel Elvira Ocazionez
Publication type:
Article
Noninvasive western lowland gorilla's health monitoring: A decade of simian immunodeficiency virus surveillance in southern Cameroon.
Published in:
Ecology & Evolution (20457758), 2018, v. 8, n. 22, p. 10698, doi. 10.1002/ece3.4478
By:
- Villabona‐Arenas, Christian Julian;
- Ayouba, Ahidjo;
- Esteban, Amandine;
- D'arc, Mirela;
- Mpoudi Ngole, Eitel;
- Peeters, Martine
Publication type:
Article
The impact of COVID-19 vaccination in prisons in England and Wales: a metapopulation model.
Published in:
BMC Public Health, 2022, v. 22, n. 1, p. 1, doi. 10.1186/s12889-022-13219-4
By:
- McCarthy, Ciara V.;
- O'Mara, Oscar;
- van Leeuwen, Edwin;
- CMMID COVID-19 Working Group;
- Sherratt, Katharine;
- Abbas, Kaja;
- Wong, Kerry LM;
- Atkins, Katherine E.;
- Lowe, Rachel;
- Meakin, Sophie R;
- Davies, Nicholas G.;
- Russell, Timothy W;
- O'Reilly, Kathleen;
- Hué, Stéphane;
- Finch, Emilie;
- Villabona-Arenas, C Julian;
- Edmunds, W John;
- Jafari, Yalda;
- Tully, Damien C;
- Bosse, Nikos I
Publication type:
Article

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