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Impact of antigen test target failure and testing strategies on the transmission of SARS-CoV-2 variants.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-33460-0
By:
- Del Vecchio, Claudia;
- Cracknell Daniels, Bethan;
- Brancaccio, Giuseppina;
- Brazzale, Alessandra Rosalba;
- Lavezzo, Enrico;
- Ciavarella, Constanze;
- Onelia, Francesco;
- Franchin, Elisa;
- Manuto, Laura;
- Bianca, Federico;
- Cianci, Vito;
- Cattelan, Anna Maria;
- Dorigatti, Ilaria;
- Toppo, Stefano;
- Crisanti, Andrea
Publication type:
Article
The epidemiology of Mayaro virus in the Americas: A systematic review and key parameter estimates for outbreak modelling.
Published in:
PLoS Neglected Tropical Diseases, 2021, v. 15, n. 6, p. 1, doi. 10.1371/journal.pntd.0009418
By:
- Caicedo, Edgar-Yaset;
- Charniga, Kelly;
- Rueda, Amanecer;
- Dorigatti, Ilaria;
- Mendez, Yardany;
- Hamlet, Arran;
- Carrera, Jean-Paul;
- Cucunubá, Zulma M.
Publication type:
Article
Author Correction: SARS-CoV-2 antibody dynamics and transmission from community-wide serological testing in the Italian municipality of Vo'.
Published in:
2021
By:
- Dorigatti, Ilaria;
- Lavezzo, Enrico;
- Manuto, Laura;
- Ciavarella, Constanze;
- Pacenti, Monia;
- Boldrin, Caterina;
- Cattai, Margherita;
- Saluzzo, Francesca;
- Franchin, Elisa;
- Del Vecchio, Claudia;
- Caldart, Federico;
- Castelli, Gioele;
- Nicoletti, Michele;
- Nieddu, Eleonora;
- Salvadoretti, Elisa;
- Labella, Beatrice;
- Fava, Ludovico;
- Guglielmo, Simone;
- Fascina, Mariateresa;
- Grazioli, Marco
Publication type:
Correction Notice
SARS-CoV-2 antibody dynamics and transmission from community-wide serological testing in the Italian municipality of Vo'.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-24622-7
By:
- Dorigatti, Ilaria;
- Lavezzo, Enrico;
- Manuto, Laura;
- Ciavarella, Constanze;
- Pacenti, Monia;
- Boldrin, Caterina;
- Cattai, Margherita;
- Saluzzo, Francesca;
- Franchin, Elisa;
- Del Vecchio, Claudia;
- Caldart, Federico;
- Castelli, Gioele;
- Nicoletti, Michele;
- Nieddu, Eleonora;
- Salvadoretti, Elisa;
- Labella, Beatrice;
- Fava, Ludovico;
- Guglielmo, Simone;
- Fascina, Mariateresa;
- Grazioli, Marco
Publication type:
Article
Potential Biases in Estimating Absolute and Relative Case-Fatality Risks during Outbreaks.
Published in:
PLoS Neglected Tropical Diseases, 2015, v. 9, n. 7, p. 1, doi. 10.1371/journal.pntd.0003846
By:
- Lipsitch, Marc;
- Donnelly, Christl A.;
- Fraser, Christophe;
- Blake, Isobel M.;
- Cori, Anne;
- Dorigatti, Ilaria;
- Ferguson, Neil M.;
- Garske, Tini;
- Mills, Harriet L.;
- Riley, Steven;
- Van Kerkhove, Maria D.;
- Hernán, Miguel A.
Publication type:
Article
Estimating Dengue Transmission Intensity from Sero-Prevalence Surveys in Multiple Countries.
Published in:
PLoS Neglected Tropical Diseases, 2015, v. 9, n. 4, p. 1, doi. 10.1371/journal.pntd.0003719
By:
- Imai, Natsuko;
- Dorigatti, Ilaria;
- Cauchemez, Simon;
- Ferguson, Neil M.
Publication type:
Article
Estimating Dengue Transmission Intensity from Sero-Prevalence Surveys in Multiple Countries.
Published in:
PLoS Neglected Tropical Diseases, 2015, v. 9, n. 4, p. 1, doi. 10.1371/journal.pntd.0003719
By:
- Imai, Natsuko;
- Dorigatti, Ilaria;
- Cauchemez, Simon;
- Ferguson, Neil M.
Publication type:
Article
Response to COVID-19 in South Korea and implications for lifting stringent interventions.
Published in:
2020
By:
- Dighe, Amy;
- Cattarino, Lorenzo;
- Cuomo-Dannenburg, Gina;
- Skarp, Janetta;
- Imai, Natsuko;
- Bhatia, Sangeeta;
- Gaythorpe, Katy A. M.;
- Ainslie, Kylie E. C.;
- Baguelin, Marc;
- Bhatt, Samir;
- Boonyasiri, Adhiratha;
- Brazeau, Nicholas F.;
- Cooper, Laura V.;
- Coupland, Helen;
- Cucunuba, Zulma;
- Dorigatti, Ilaria;
- Eales, Oliver D.;
- van Elsland, Sabine L.;
- FitzJohn, Richard G.;
- Green, William D.
Publication type:
journal article
Estimating Dengue Transmission Intensity from Case-Notification Data from Multiple Countries.
Published in:
PLoS Neglected Tropical Diseases, 2016, v. 10, n. 7, p. 1, doi. 10.1371/journal.pntd.0004833
By:
- Imai, Natsuko;
- Dorigatti, Ilaria;
- Cauchemez, Simon;
- Ferguson, Neil M.
Publication type:
Article
Estimating transmission probability in schools for the 2009 H1N1 influenza pandemic in Italy.
Published in:
Theoretical Biology & Medical Modelling, 2016, v. 13, p. 1, doi. 10.1186/s12976-016-0045-2
By:
- Clamer, Valentina;
- Dorigatti, Ilaria;
- Fumanelli, Laura;
- Rizzo, Caterina;
- Pugliese, Andrea
Publication type:
Article
Efficacy profile of the CYD-TDV dengue vaccine revealed by Bayesian survival analysis of individual-level phase III data.
Published in:
eLife, 2021, p. 1, doi. 10.7554/eLife.65131
By:
- Laydon, Daniel J.;
- Dorigatti, Ilaria;
- Hinsley, Wes R.;
- Nedjati-Gilani, Gemma;
- Coudeville, Laurent;
- Ferguson, Neil M.
Publication type:
Article
Comparison of machine learning methods for estimating case fatality ratios: An Ebola outbreak simulation study.
Published in:
PLoS ONE, 2021, v. 16, n. 9, p. 1, doi. 10.1371/journal.pone.0257005
By:
- Forna, Alpha;
- Dorigatti, Ilaria;
- Nouvellet, Pierre;
- Donnelly, Christl A.
Publication type:
Article
Risk of yellow fever virus importation into the United States from Brazil, outbreak years 2016–2017 and 2017–2018.
Published in:
Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-019-56521-9
By:
- Dorigatti, Ilaria;
- Morrison, Stephanie;
- Donnelly, Christl A.;
- Garske, Tini;
- Bowden, Sarah;
- Grills, Ardath
Publication type:
Article
Spatiotemporal variability in dengue transmission intensity in Jakarta, Indonesia.
Published in:
PLoS Neglected Tropical Diseases, 2020, v. 14, n. 3, p. 1, doi. 10.1371/journal.pntd.0008102
By:
- O'Driscoll, Megan;
- Imai, Natsuko;
- Ferguson, Neil M.;
- Hadinegoro, Sri Rezeki;
- Satari, Hindra Irawan;
- Tam, Clarence C.;
- Dorigatti, Ilaria
Publication type:
Article
A quantitative comparison of West Nile virus incidence from 2013 to 2018 in Emilia-Romagna, Italy.
Published in:
PLoS Neglected Tropical Diseases, 2020, v. 14, n. 1, p. N.PAG, doi. 10.1371/journal.pntd.0007953
By:
- Marini, Giovanni;
- Calzolari, Mattia;
- Angelini, Paola;
- Bellini, Romeo;
- Bellini, Silvia;
- Bolzoni, Luca;
- Torri, Deborah;
- Defilippo, Francesco;
- Dorigatti, Ilaria;
- Nikolay, Birgit;
- Pugliese, Andrea;
- Rosà, Roberto;
- Tamba, Marco
Publication type:
Article
Unveiling Post-COVID-19 syndrome: incidence, biomarkers, and clinical phenotypes in a Thai population.
Published in:
BMC Infectious Diseases, 2024, v. 24, n. 1, p. 1, doi. 10.1186/s12879-024-10055-2
By:
- Sangkaew, Sorawat;
- Tumviriyakul, Hathaitip;
- Cheranakhorn, Chutima;
- Songumpai, Nopporn;
- Pinpathomrat, Nawamin;
- Seeyankem, Bunya;
- Yasharad, Kameelah;
- Loomcharoen, Palanthorn;
- Pakdee, Wisitsak;
- Changawej, Chanunya;
- Dumrongkullachart, Dararat;
- Limheng, Amornrat;
- Dorigatti, Ilaria
Publication type:
Article
Rapid SARS-CoV-2 Intra-Host and Within-Household Emergence of Novel Haplotypes.
Published in:
Viruses (1999-4915), 2022, v. 14, n. 2, p. 399, doi. 10.3390/v14020399
By:
- Manuto, Laura;
- Grazioli, Marco;
- Spitaleri, Andrea;
- Fontana, Paolo;
- Bianco, Luca;
- Bertolotti, Luigi;
- Bado, Martina;
- Mazzotti, Giorgia;
- Bianca, Federico;
- Onelia, Francesco;
- Lorenzin, Giovanni;
- Simeoni, Fabio;
- Lazarevic, Dejan;
- Franchin, Elisa;
- Vecchio, Claudia Del;
- Dorigatti, Ilaria;
- Tonon, Giovanni;
- Cirillo, Daniela Maria;
- Lavezzo, Enrico;
- Crisanti, Andrea
Publication type:
Article
Refining Reproduction Number Estimates to Account for Unobserved Generations of Infection in Emerging Epidemics.
Published in:
Clinical Infectious Diseases, 2022, v. 75, n. 1, p. e114, doi. 10.1093/cid/ciac138
By:
- Brizzi, Andrea;
- O'Driscoll, Megan;
- Dorigatti, Ilaria
Publication type:
Article
A Comparative Analysis of Statistical Methods to Estimate the Reproduction Number in Emerging Epidemics, With Implications for the Current Coronavirus Disease 2019 (COVID-19) Pandemic.
Published in:
Clinical Infectious Diseases, 2021, v. 73, n. 1, p. e215, doi. 10.1093/cid/ciaa1599
By:
- O'Driscoll, Megan;
- Harry, Carole;
- Donnelly, Christl A;
- Cori, Anne;
- Dorigatti, Ilaria
Publication type:
Article
Case Fatality Ratio Estimates for the 2013–2016 West African Ebola Epidemic: Application of Boosted Regression Trees for Imputation.
Published in:
Clinical Infectious Diseases, 2020, v. 70, n. 12, p. 2476, doi. 10.1093/cid/ciz678
By:
- Forna, Alpha;
- Nouvellet, Pierre;
- Dorigatti, Ilaria;
- Donnelly, Christl A
Publication type:
Article
Environmental suitability for lymphatic filariasis in Nigeria.
Published in:
Parasites & Vectors, 2018, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13071-018-3097-9
By:
- Eneanya, Obiora A.;
- Cano, Jorge;
- Dorigatti, Ilaria;
- Anagbogu, Ifeoma;
- Okoronkwo, Chukwu;
- Garske, Tini;
- Donnelly, Christl A.
Publication type:
Article
Modelling the impact of JNJ-1802, a first-in-class dengue inhibitor blocking the NS3-NS4B interaction, on in-vitro DENV-2 dynamics.
Published in:
PLoS Computational Biology, 2023, v. 19, n. 12, p. 1, doi. 10.1371/journal.pcbi.1011662
By:
- McCormack, Clare P.;
- Goethals, Olivia;
- Goeyvaerts, Nele;
- Woot de Trixhe, Xavier D.;
- Geluykens, Peggy;
- Borrenberghs, Doortje;
- Ferguson, Neil M.;
- Ackaert, Oliver;
- Dorigatti, Ilaria
Publication type:
Article
A simulation-based method to inform serosurvey designs for estimating the force of infection using existing blood samples.
Published in:
PLoS Computational Biology, 2023, v. 19, n. 11, p. 1, doi. 10.1371/journal.pcbi.1011666
By:
- Vicco, Anna;
- McCormack, Clare P.;
- Pedrique, Belen;
- Amuasi, John H.;
- Awuah, Anthony Afum-Adjei;
- Obirikorang, Christian;
- Struck, Nicole S.;
- Lorenz, Eva;
- May, Jürgen;
- Ribeiro, Isabela;
- Malavige, Gathsaurie Neelika;
- Donnelly, Christl A.;
- Dorigatti, Ilaria
Publication type:
Article
Modelling Virus and Antibody Dynamics during Dengue Virus Infection Suggests a Role for Antibody in Virus Clearance.
Published in:
PLoS Computational Biology, 2016, v. 12, n. 5, p. 1, doi. 10.1371/journal.pcbi.1004951
By:
- Clapham, Hannah E;
- Quyen, Than Ha;
- Kien, Duong Thi Hue;
- Dorigatti, Ilaria;
- Simmons, Cameron P;
- Ferguson, Neil M
Publication type:
Article
The Long-Term Safety, Public Health Impact, and Cost-Effectiveness of Routine Vaccination with a Recombinant, Live-Attenuated Dengue Vaccine (Dengvaxia): A Model Comparison Study.
Published in:
2016
By:
- Flasche, Stefan;
- Jit, Mark;
- Rodríguez-Barraquer, Isabel;
- Coudeville, Laurent;
- Recker, Mario;
- Koelle, Katia;
- Milne, George;
- Hladish, Thomas J.;
- Perkins, T. Alex;
- Cummings, Derek A. T.;
- Dorigatti, Ilaria;
- Laydon, Daniel J.;
- España, Guido;
- Kelso, Joel;
- Longini, Ira;
- Lourenco, Jose;
- Pearson, Carl A. B.;
- Reiner, Robert C.;
- Mier-y-Terán-Romero, Luis;
- Vannice, Kirsten
Publication type:
journal article
Exposure Patterns Driving Ebola Transmission in West Africa: A Retrospective Observational Study.
Published in:
2016
By:
- null, null;
- Agua-Agum, Junerlyn;
- Ariyarajah, Archchun;
- Aylward, Bruce;
- Bawo, Luke;
- Bilivogui, Pepe;
- Blake, Isobel M.;
- Brennan, Richard J.;
- Cawthorne, Amy;
- Cleary, Eilish;
- Clement, Peter;
- Conteh, Roland;
- Cori, Anne;
- Dafae, Foday;
- Dahl, Benjamin;
- Dangou, Jean-Marie;
- Diallo, Boubacar;
- Donnelly, Christl A.;
- Dorigatti, Ilaria;
- Dye, Christopher
Publication type:
journal article
Epidemiological and genomic investigation of chikungunya virus in Rio de Janeiro state, Brazil, between 2015 and 2018.
Published in:
PLoS Neglected Tropical Diseases, 2023, v. 17, n. 9, p. 1, doi. 10.1371/journal.pntd.0011536
By:
- Moreira, Filipe Romero Rebello;
- Menezes, Mariane Talon de;
- Salgado-Benvindo, Clarisse;
- Whittaker, Charles;
- Cox, Victoria;
- Chandradeva, Nilani;
- Paula, Hury Hellen Souza de;
- Martins, André Frederico;
- Chagas, Raphael Rangel das;
- Brasil, Rodrigo Decembrino Vargas;
- Cândido, Darlan da Silva;
- Herlinger, Alice Laschuk;
- Ribeiro, Marisa de Oliveira;
- Arruda, Monica Barcellos;
- Alvarez, Patricia;
- Tôrres, Marcelo Calado de Paula;
- Dorigatti, Ilaria;
- Brady, Oliver;
- Voloch, Carolina Moreira;
- Tanuri, Amilcar
Publication type:
Article
Reduction in mobility and COVID-19 transmission.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-21358-2
By:
- Nouvellet, Pierre;
- Bhatia, Sangeeta;
- Cori, Anne;
- Ainslie, Kylie E. C.;
- Baguelin, Marc;
- Bhatt, Samir;
- Boonyasiri, Adhiratha;
- Brazeau, Nicholas F.;
- Cattarino, Lorenzo;
- Cooper, Laura V.;
- Coupland, Helen;
- Cucunuba, Zulma M.;
- Cuomo-Dannenburg, Gina;
- Dighe, Amy;
- Djaafara, Bimandra A.;
- Dorigatti, Ilaria;
- Eales, Oliver D.;
- van Elsland, Sabine L.;
- Nascimento, Fabricia F.;
- FitzJohn, Richard G.
Publication type:
Article
Correction: The epidemiology of Mayaro virus in the Americas: A systematic review and key parameter estimates for outbreak modelling.
Published in:
2023
By:
- Caicedo, Edgar-Yaset;
- Charniga, Kelly;
- Rueda, Amanecer;
- Dorigatti, Ilaria;
- Mendez, Yardany;
- Hamlet, Arran;
- Carrera, Jean-Paul;
- Cucunubá, Zulma M.
Publication type:
Correction Notice
Estimating dengue transmission intensity from serological data: A comparative analysis using mixture and catalytic models.
Published in:
PLoS Neglected Tropical Diseases, 2022, v. 16, n. 7, p. 1, doi. 10.1371/journal.pntd.0010592
By:
- Cox, Victoria;
- O'Driscoll, Megan;
- Imai, Natsuko;
- Prayitno, Ari;
- Hadinegoro, Sri Rezeki;
- Taurel, Anne-Frieda;
- Coudeville, Laurent;
- Dorigatti, Ilaria
Publication type:
Article
Using cluster analysis to reconstruct dengue exposure patterns from cross-sectional serological studies in Singapore.
Published in:
Parasites & Vectors, 2020, v. 13, n. 1, p. 1, doi. 10.1186/s13071-020-3898-5
By:
- Sangkaew, Sorawat;
- Tan, Li Kiang;
- Ng, Lee Ching;
- Ferguson, Neil M.;
- Dorigatti, Ilaria
Publication type:
Article

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