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Structure-Based Virtual Screening of Glycogen Synthase Kinase 3β Inhibitors: Analysis of Scoring Functions Applied to Large True Actives and Decoy Sets.
- Published in:
- Chemical Biology & Drug Design, 2011, v. 78, n. 3, p. 378, doi. 10.1111/j.1747-0285.2011.01159.x
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- Publication type:
- Article
Conjugates of Tacrine and Salicylic Acid Derivatives as New Promising Multitarget Agents for Alzheimer's Disease.
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- International Journal of Molecular Sciences, 2023, v. 24, n. 3, p. 2285, doi. 10.3390/ijms24032285
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- Publication type:
- Article
Assessing How Residual Errors of Scoring Functions Correlate to Ligand Structural Features.
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- International Journal of Molecular Sciences, 2022, v. 23, n. 23, p. 15018, doi. 10.3390/ijms232315018
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- Publication type:
- Article
Computational characterization of the glutamate receptor antagonist perampanel and its close analogs: density functional exploration of conformational space and molecular docking study.
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- Journal of Molecular Modeling, 2019, v. 25, n. 10, p. 1, doi. 10.1007/s00894-019-4188-z
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- Publication type:
- Article
Decomposition of Small Molecules for Fragment-Based Drug Design.
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- Biophysica, 2023, v. 3, n. 2, p. 362, doi. 10.3390/biophysica3020024
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- Publication type:
- Article
Novel point charge models: reliable instruments formolecular electrostatic.
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- Journal of Physical Organic Chemistry, 2001, v. 14, n. 6, p. 355, doi. 10.1002/poc.378
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- Publication type:
- Article
The predominance of axial conformers for trans-4-substituted cyclohexene oxides.
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- Journal of Physical Organic Chemistry, 1996, v. 9, n. 10, p. 706, doi. 10.1002/(SICI)1099-1395(199610)9:10<706::AID-POC835>3.0.CO;2-2
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- Publication type:
- Article
Signatures of the ATP-binding pocket as a basis for structural classification of the serine/threonine protein kinases of gram-positive bacteria.
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- Proteins, 2012, v. 80, n. 5, p. 1363, doi. 10.1002/prot.24032
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- Publication type:
- Article
Neuroprotective and Cognition-Enhancing Properties of MK-801 Flexible Analogs.
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- Annals of the New York Academy of Sciences, 2001, v. 939, n. 1, p. 219, doi. 10.1111/j.1749-6632.2001.tb03629.x
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- Publication type:
- Article
Diversity of AMPA Receptor Ligands: Chemotypes, Binding Modes, Mechanisms of Action, and Therapeutic Effects.
- Published in:
- Biomolecules (2218-273X), 2023, v. 13, n. 1, p. 56, doi. 10.3390/biom13010056
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- Publication type:
- Article
New Multifunctional Agents for Potential Alzheimer's Disease Treatment Based on Tacrine Conjugates with 2-Arylhydrazinylidene-1,3-Diketones.
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- Biomolecules (2218-273X), 2022, v. 12, n. 11, p. 1551, doi. 10.3390/biom12111551
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- Publication type:
- Article
Ensemble docking based virtual screening of SARS‐CoV‐2 main protease inhibitors.
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- Molecular Informatics, 2024, v. 43, n. 8, p. 1, doi. 10.1002/minf.202300279
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- Publication type:
- Article
Getting to Know the Neighbours with GTM: The Case of Antiviral Compounds.
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- Molecular Informatics, 2019, v. 38, n. 5, p. N.PAG, doi. 10.1002/minf.201800166
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- Publication type:
- Article
Machine Learning Classification Models to Improve the Docking‐based Screening: A Case of PI3K‐Tankyrase Inhibitors.
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- Molecular Informatics, 2018, v. 37, n. 11, p. N.PAG, doi. 10.1002/minf.201800030
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- Publication type:
- Article
Perspectives of Halogen Bonding Description in Scoring Functions and QSAR/QSPR: Substituent Effects in Aromatic Core.
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- Molecular Informatics, 2015, v. 34, n. 6/7, p. 404, doi. 10.1002/minf.201400195
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- Publication type:
- Article
Interaction of Flaviviruses with Reproduction Inhibitors Binding in β-OG Pocket: Insights from Molecular Dynamics Simulations.
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- Molecular Informatics, 2014, v. 33, n. 10, p. 695, doi. 10.1002/minf.201300185
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- Publication type:
- Article
General Purpose Electronegativity Relaxation Charge Models Applied to CoMFA and CoMSIA Study of GSK-3 Inhibitors.
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- Molecular Informatics, 2011, v. 30, n. 2/3, p. 169, doi. 10.1002/minf.201000141
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- Publication type:
- Article
Building QSAR for HTS in vitro assays - a study for the prediction of Aryl hydrocarbon receptor activators.
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- 2013
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- Publication type:
- Conference Paper/Materials
Computational studies of flaviviruses: approaching to novel fusion inhibitors.
- Published in:
- 2012
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- Publication type:
- Abstract
Ionotropic GABA receptors: modelling and design of selective ligands.
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- 2010
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- Publication type:
- Abstract
Ab Initio Conformational Analysis of 3,7-Diacetyl-3,7-Diazabicyclo[3.3.1]Nonanes.
- Published in:
- Natural Product Communications, 2024, v. 19, n. 3, p. 1, doi. 10.1177/1934578X241239199
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- Publication type:
- Article
Enhanced taxonomy annotation of antiviral activity data from ChEMBL.
- Published in:
- Database: The Journal of Biological Databases & Curation, 2019, v. 2019, p. N.PAG, doi. 10.1093/database/bay139
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- Publication type:
- Article
Conformational Switching of 3,7-Diacyl-3,7-diazabicyclo[3.3.1]nonanes by Metal Binding and by Solvent Changes.
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- European Journal of Organic Chemistry, 1999, v. 1999, n. 12, p. 3479, doi. 10.1002/(SICI)1099-0690(199912)1999:12<3479::AID-EJOC3479>3.0.CO;2-H
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- Publication type:
- Article
Novel substituted 5‐methyl‐4‐acylaminoisoxazoles as antimitotic agents: Evaluation of selectivity to LNCaP cancer cells.
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- Archiv der Pharmazie, 2022, v. 355, n. 5, p. 1, doi. 10.1002/ardp.202100425
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- Publication type:
- Article
Probing chemical space of tick‐borne encephalitis virus reproduction inhibitors with organoselenium compounds.
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- Archiv der Pharmazie, 2018, v. 351, n. 6, p. 1, doi. 10.1002/ardp.201700353
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- Publication type:
- Article
Temperature-Induced Restructuring of Mycolic Acid Bilayers Modeling the Mycobacterium tuberculosis Outer Membrane: A Molecular Dynamics Study.
- Published in:
- Molecules, 2024, v. 29, n. 3, p. 696, doi. 10.3390/molecules29030696
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- Publication type:
- Article
Combining Experimental and Computational Methods to Produce Conjugates of Anticholinesterase and Antioxidant Pharmacophores with Linker Chemistries Affecting Biological Activities Related to Treatment of Alzheimer's Disease.
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- Molecules, 2024, v. 29, n. 2, p. 321, doi. 10.3390/molecules29020321
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- Publication type:
- Article
Conformational Dynamics and Stability of Bilayers Formed by Mycolic Acids from the Mycobacterium tuberculosis Outer Membrane.
- Published in:
- Molecules, 2023, v. 28, n. 3, p. 1347, doi. 10.3390/molecules28031347
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- Publication type:
- Article
Machine Learning Prediction of Mycobacterial Cell Wall Permeability of Drugs and Drug-like Compounds.
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- Molecules, 2023, v. 28, n. 2, p. 633, doi. 10.3390/molecules28020633
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- Publication type:
- Article
Novel Nanomolar Allosteric Modulators of AMPA Receptor of Bis(pyrimidine) Series: Synthesis, Biotesting and SAR Analysis.
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- Molecules, 2022, v. 27, n. 23, p. 8252, doi. 10.3390/molecules27238252
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- Publication type:
- Article
Synthesis and Cytotoxic Activity of 1,2,4-Triazolo-Linked Bis -Indolyl Conjugates as Dual Inhibitors of Tankyrase and PI3K.
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- Molecules, 2022, v. 27, n. 21, p. 7642, doi. 10.3390/molecules27217642
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- Publication type:
- Article
In Silico Structure-Based Approach for Group Efficiency Estimation in Fragment-Based Drug Design Using Evaluation of Fragment Contributions.
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- Molecules, 2022, v. 27, n. 6, p. 1985, doi. 10.3390/molecules27061985
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- Publication type:
- Article
Bis-Amiridines as Acetylcholinesterase and Butyrylcholinesterase Inhibitors: N -Functionalization Determines the Multitarget Anti-Alzheimer's Activity Profile.
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- Molecules, 2022, v. 27, n. 3, p. 1060, doi. 10.3390/molecules27031060
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- Article
Charge-changing point mutations in the E protein of tick-borne encephalitis virus.
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- Archives of Virology, 2023, v. 168, n. 3, p. 1, doi. 10.1007/s00705-023-05728-3
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- Publication type:
- Article
Do electrostatic interactions make a difference in physics‐based AutoDock4 scoring function?
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- Journal of Computational Chemistry, 2024, v. 45, n. 21, p. 1806, doi. 10.1002/jcc.27373
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- Article
On hidden anisotropy of formally charged fragments.
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- Journal of Computational Chemistry, 2023, v. 44, n. 13, p. 1312, doi. 10.1002/jcc.27083
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- Publication type:
- Article
Online chemical modeling environment (OCHEM): web platform for data storage, model development and publishing of chemical information.
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- Journal of Computer-Aided Molecular Design, 2011, v. 25, n. 6, p. 533, doi. 10.1007/s10822-011-9440-2
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- Publication type:
- Article
Virtual computational chemistry laboratory – design and description.
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- Journal of Computer-Aided Molecular Design, 2005, v. 19, n. 6, p. 453, doi. 10.1007/s10822-005-8694-y
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- Publication type:
- Article
Bis-γ-carbolines as new potential multitarget agents for Alzheimer's disease.
- Published in:
- Pure & Applied Chemistry, 2020, v. 92, n. 7, p. 1057, doi. 10.1515/pac-2019-1206
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- Publication type:
- Article
Derivatives of 9-phosphorylated acridine as butyrylcholinesterase inhibitors with antioxidant activity and the ability to inhibit β-amyloid self-aggregation: potential therapeutic agents for Alzheimer's disease.
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- Frontiers in Pharmacology, 2023, p. 01, doi. 10.3389/fphar.2023.1219980
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- Publication type:
- Article
Kirchhoff atomic charges fitted to multipole moments: Implementation for a virtual screening system.
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- Journal of Computational Chemistry, 2008, v. 29, n. 8, p. 1332, doi. 10.1002/jcc.20892
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- Publication type:
- Article
A Facile Approach to Bis(isoxazoles), Promising Ligands of the AMPA Receptor.
- Published in:
- Molecules, 2021, v. 26, n. 21, p. 6411, doi. 10.3390/molecules26216411
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- Publication type:
- Article
Towards Deep Neural Network Models for the Prediction of the Blood–Brain Barrier Permeability for Diverse Organic Compounds.
- Published in:
- Molecules, 2020, v. 25, n. 24, p. 5901, doi. 10.3390/molecules25245901
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- Publication type:
- Article
New Multifunctional Agents Based on Conjugates of 4-Amino-2,3-polymethylenequinoline and Butylated Hydroxytoluene for Alzheimer's Disease Treatment.
- Published in:
- Molecules, 2020, v. 25, n. 24, p. 5891, doi. 10.3390/molecules25245891
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- Publication type:
- Article
New Hybrids of 4-Amino-2,3-polymethylene-quinoline and p-Tolylsulfonamide as Dual Inhibitors of Acetyl- and Butyrylcholinesterase and Potential Multifunctional Agents for Alzheimer's Disease Treatment.
- Published in:
- Molecules, 2020, v. 25, n. 17, p. 3915, doi. 10.3390/molecules25173915
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- Publication type:
- Article
Discovery of Novel Tankyrase Inhibitors through Molecular Docking-Based Virtual Screening and Molecular Dynamics Simulation Studies.
- Published in:
- Molecules, 2020, v. 25, n. 14, p. 3171, doi. 10.3390/molecules25143171
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- Publication type:
- Article
Comparison of pure and combined search strategies for single and multiple targets.
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- European Physical Journal B: Condensed Matter, 2017, v. 90, n. 9, p. 1, doi. 10.1140/epjb/e2017-80372-4
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- Publication type:
- Article
Free Energy Barriers for Passive Drug Transport through the Mycobacterium tuberculosis Outer Membrane: A Molecular Dynamics Study.
- Published in:
- International Journal of Molecular Sciences, 2024, v. 25, n. 2, p. 1006, doi. 10.3390/ijms25021006
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- Publication type:
- Article
5-Nitroisoxazoles in S N Ar Reactions: A Novel Chemo- and Regioselective Approach to Isoxazole-Based Bivalent Ligands of AMPA Receptors.
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- International Journal of Molecular Sciences, 2023, v. 24, n. 22, p. 16135, doi. 10.3390/ijms242216135
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- Publication type:
- Article
New Allosteric Modulators of AMPA Receptors: Synthesis and Study of Their Functional Activity by Radioligand-Receptor Binding Analysis.
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- International Journal of Molecular Sciences, 2023, v. 24, n. 12, p. 10293, doi. 10.3390/ijms241210293
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- Publication type:
- Article