Found: 85
Select item for more details and to access through your institution.
Recent Deep Learning Methodology Development for RNA–RNA Interaction Prediction.
- Published in:
- Symmetry (20738994), 2022, v. 14, n. 7, p. N.PAG, doi. 10.3390/sym14071302
- By:
- Publication type:
- Article
A Non-homogeneous Firefly Algorithm and Its Convergence Analysis.
- Published in:
- Journal of Optimization Theory & Applications, 2016, v. 170, n. 2, p. 616, doi. 10.1007/s10957-016-0875-4
- By:
- Publication type:
- Article
Protein Structure Refinement Using Multi-Objective Particle Swarm Optimization with Decomposition Strategy.
- Published in:
- International Journal of Molecular Sciences, 2021, v. 22, n. 9, p. 4408, doi. 10.3390/ijms22094408
- By:
- Publication type:
- Article
RBPsuite: RNA-protein binding sites prediction suite based on deep learning.
- Published in:
- BMC Genomics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12864-020-07291-6
- By:
- Publication type:
- Article
RNA-protein binding motifs mining with a new hybrid deep learning based cross-domain knowledge integration approach.
- Published in:
- 2017
- By:
- Publication type:
- Product Review
Prediction of Protein-Protein Interaction Sites with Machine-Learning-Based Data-Cleaning and Post-Filtering Procedures.
- Published in:
- 2016
- By:
- Publication type:
- journal article
TargetFreeze: Identifying Antifreeze Proteins via a Combination of Weights using Sequence Evolutionary Information and Pseudo Amino Acid Composition.
- Published in:
- 2015
- By:
- Publication type:
- journal article
MINDG: a drug–target interaction prediction method based on an integrated learning algorithm.
- Published in:
- Bioinformatics, 2024, v. 40, n. 4, p. 1, doi. 10.1093/bioinformatics/btae147
- By:
- Publication type:
- Article
MLNGCF: circRNA–disease associations prediction with multilayer attention neural graph-based collaborative filtering.
- Published in:
- Bioinformatics, 2023, v. 39, n. 8, p. 1, doi. 10.1093/bioinformatics/btad499
- By:
- Publication type:
- Article
De novo drug design by iterative multiobjective deep reinforcement learning with graph-based molecular quality assessment.
- Published in:
- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad157
- By:
- Publication type:
- Article
GraphLoc: a graph neural network model for predicting protein subcellular localization from immunohistochemistry images.
- Published in:
- Bioinformatics, 2022, v. 38, n. 21, p. 4941, doi. 10.1093/bioinformatics/btac634
- By:
- Publication type:
- Article
CoCoPRED: coiled-coil protein structural feature prediction from amino acid sequence using deep neural networks.
- Published in:
- Bioinformatics, 2022, v. 38, n. 3, p. 720, doi. 10.1093/bioinformatics/btab744
- By:
- Publication type:
- Article
Accurate inference of gene regulatory interactions from spatial gene expression with deep contrastive learning.
- Published in:
- Bioinformatics, 2022, v. 38, n. 3, p. 746, doi. 10.1093/bioinformatics/btab718
- By:
- Publication type:
- Article
lncLocator 2.0: a cell-line-specific subcellular localization predictor for long non-coding RNAs with interpretable deep learning.
- Published in:
- Bioinformatics, 2021, v. 37, n. 16, p. 2308, doi. 10.1093/bioinformatics/btab127
- By:
- Publication type:
- Article
Automatic image registration by local descriptors in remote sensing.
- Published in:
- Optical Engineering, 2008, v. 47, n. 8, p. 87206, doi. 10.1117/1.2969121
- By:
- Publication type:
- Article
TFvelo: gene regulation inspired RNA velocity estimation.
- Published in:
- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-45661-w
- By:
- Publication type:
- Article
ZeroBind: a protein-specific zero-shot predictor with subgraph matching for drug-target interactions.
- Published in:
- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-43597-1
- By:
- Publication type:
- Article
Adaptive Firefly Algorithm: Parameter Analysis and its Application.
- Published in:
- PLoS ONE, 2014, v. 9, n. 11, p. 1, doi. 10.1371/journal.pone.0112634
- By:
- Publication type:
- Article
A New Supervised Over-Sampling Algorithm with Application to Protein-Nucleotide Binding Residue Prediction.
- Published in:
- PLoS ONE, 2014, v. 9, n. 9, p. 1, doi. 10.1371/journal.pone.0107676
- By:
- Publication type:
- Article
Revealing the Hidden Relationship by Sparse Modules in Complex Networks with a Large-Scale Analysis.
- Published in:
- PLoS ONE, 2013, v. 8, n. 6, p. 1, doi. 10.1371/journal.pone.0066020
- By:
- Publication type:
- Article
BinTree Seeking: A Novel Approach to Mine Both Bi-Sparse and Cohesive Modules in Protein Interaction Networks.
- Published in:
- PLoS ONE, 2011, v. 6, n. 11, p. 1, doi. 10.1371/journal.pone.0027646
- By:
- Publication type:
- Article
Plant-mPLoc: A Top-Down Strategy to Augment the Power for Predicting Plant Protein Subcellular Localization.
- Published in:
- PLoS ONE, 2010, v. 5, n. 6, p. 1, doi. 10.1371/journal.pone.0011335
- By:
- Publication type:
- Article
A new method for predicting the subcellular localization of eukaryotic proteins with both single and multiple sites: Euk-mPLoc 2.0.
- Published in:
- PLoS ONE, 2010, v. 5, n. 4, p. 1, doi. 10.1371/journal.pone.0009931
- By:
- Publication type:
- Article
Template-based protein structure prediction in CASP11 and retrospect of I-TASSER in the last decade.
- Published in:
- Proteins, 2016, v. 84, p. 233, doi. 10.1002/prot.24918
- By:
- Publication type:
- Article
Integration of QUARK and I-TASSER for Ab Initio Protein Structure Prediction in CASP11.
- Published in:
- Proteins, 2016, v. 84, p. 76, doi. 10.1002/prot.24930
- By:
- Publication type:
- Article
Improving accuracy of protein contact prediction using balanced network deconvolution.
- Published in:
- Proteins, 2015, v. 83, n. 3, p. 485, doi. 10.1002/prot.24744
- By:
- Publication type:
- Article
LabCaS: Labeling calpain substrate cleavage sites from amino acid sequence using conditional random fields.
- Published in:
- Proteins, 2013, v. 81, n. 4, p. 622, doi. 10.1002/prot.24217
- By:
- Publication type:
- Article
IPMiner: hidden ncRNA-protein interaction sequential pattern mining with stacked autoencoder for accurate computational prediction.
- Published in:
- BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2931-8
- By:
- Publication type:
- Article
RNA-protein binding motifs mining with a new hybrid deep learning based cross-domain knowledge integration approach.
- Published in:
- BMC Cancer, 2017, v. 17, p. 1, doi. 10.1186/s12859-017-1561-8
- By:
- Publication type:
- Article
Large-scale plant protein subcellular location prediction.
- Published in:
- Journal of Cellular Biochemistry, 2007, v. 100, n. 3, p. 665, doi. 10.1002/jcb.21096
- By:
- Publication type:
- Article
Predicting protein subcellular location by fusing multiple classifiers.
- Published in:
- Journal of Cellular Biochemistry, 2006, v. 99, n. 2, p. 517, doi. 10.1002/jcb.20879
- By:
- Publication type:
- Article
TargetCrys: protein crystallization prediction by fusing multi-view features with two-layered SVM.
- Published in:
- Amino Acids, 2016, v. 48, n. 11, p. 2533, doi. 10.1007/s00726-016-2274-4
- By:
- Publication type:
- Article
Learning protein multi-view features in complex space.
- Published in:
- Amino Acids, 2013, v. 44, n. 5, p. 1365, doi. 10.1007/s00726-013-1472-6
- By:
- Publication type:
- Article
SOMPNN: an efficient non-parametric model for predicting transmembrane helices.
- Published in:
- Amino Acids, 2012, v. 42, n. 6, p. 2195, doi. 10.1007/s00726-011-0959-2
- By:
- Publication type:
- Article
Understanding the mechanisms of halotolerance in members of Pontixanthobacter and Allopontixanthobacter by comparative genome analysis.
- Published in:
- Frontiers in Microbiology, 2023, v. 14, p. 1, doi. 10.3389/fmicb.2023.1111472
- By:
- Publication type:
- Article
Enhancing protein-vitamin binding residues prediction by multiple heterogeneous subspace SVMs ensemble.
- Published in:
- BMC Bioinformatics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2105-15-297
- By:
- Publication type:
- Article
Predicting protein-ATP binding sites from primary sequence through fusing bi-profile sampling of multi-view features.
- Published in:
- BMC Bioinformatics, 2012, v. 13, n. 1, p. 118, doi. 10.1186/1471-2105-13-118
- By:
- Publication type:
- Article
Fast protein structure comparison through effective representation learning with contrastive graph neural networks.
- Published in:
- PLoS Computational Biology, 2022, v. 18, n. 3, p. 1, doi. 10.1371/journal.pcbi.1009986
- By:
- Publication type:
- Article
High-accuracy protein model quality assessment using attention graph neural networks.
- Published in:
- Briefings in Bioinformatics, 2023, v. 24, n. 2, p. 1, doi. 10.1093/bib/bbac614
- By:
- Publication type:
- Article
Leveraging scaffold information to predict protein–ligand binding affinity with an empirical graph neural network.
- Published in:
- Briefings in Bioinformatics, 2023, v. 24, n. 1, p. 1, doi. 10.1093/bib/bbac603
- By:
- Publication type:
- Article
MDGF-MCEC: a multi-view dual attention embedding model with cooperative ensemble learning for CircRNA-disease association prediction.
- Published in:
- Briefings in Bioinformatics, 2022, v. 23, n. 5, p. 1, doi. 10.1093/bib/bbac289
- By:
- Publication type:
- Article
Accurate flexible refinement for atomic-level protein structure using cryo-EM density maps and deep learning.
- Published in:
- Briefings in Bioinformatics, 2022, v. 23, n. 2, p. 1, doi. 10.1093/bib/bbac026
- By:
- Publication type:
- Article
SIFLoc: a self-supervised pre-training method for enhancing the recognition of protein subcellular localization in immunofluorescence microscopic images.
- Published in:
- Briefings in Bioinformatics, 2022, v. 23, n. 2, p. 1, doi. 10.1093/bib/bbab605
- By:
- Publication type:
- Article
Learning protein subcellular localization multi-view patterns from heterogeneous data of imaging, sequence and networks.
- Published in:
- Briefings in Bioinformatics, 2022, v. 23, n. 2, p. 1, doi. 10.1093/bib/bbab539
- By:
- Publication type:
- Article
circRNA-binding protein site prediction based on multi-view deep learning, subspace learning and multi-view classifier.
- Published in:
- Briefings in Bioinformatics, 2022, v. 23, n. 1, p. 1, doi. 10.1093/bib/bbab394
- By:
- Publication type:
- Article
Recognizing binding sites of poorly characterized RNA-binding proteins on circular RNAs using attention Siamese network.
- Published in:
- Briefings in Bioinformatics, 2021, v. 22, n. 6, p. 1, doi. 10.1093/bib/bbab279
- By:
- Publication type:
- Article
RNA-binding protein recognition based on multi-view deep feature and multi-label learning.
- Published in:
- Briefings in Bioinformatics, 2021, v. 22, n. 3, p. 1, doi. 10.1093/bib/bbaa174
- By:
- Publication type:
- Article
Prediction of RNA-protein sequence and structure binding preferences using deep convolutional and recurrent neural networks.
- Published in:
- BMC Genomics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12864-018-4889-1
- By:
- Publication type:
- Article
Semantic-Based Implicit Feature Transform for Few-Shot Classification.
- Published in:
- International Journal of Computer Vision, 2024, v. 132, n. 11, p. 5014, doi. 10.1007/s11263-024-02113-8
- By:
- Publication type:
- Article
AttSiOff: a self-attention-based approach on siRNA design with inhibition and off-target effect prediction.
- Published in:
- Med-X, 2024, v. 2, n. 1, p. 1, doi. 10.1007/s44258-024-00019-1
- By:
- Publication type:
- Article