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Single-cell and bulk transcriptomics of the liver reveals potential targets of NASH with fibrosis.
Published in:
Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-98806-y
By:
- Wang, Zhong-Yi;
- Keogh, Adrian;
- Waldt, Annick;
- Cuttat, Rachel;
- Neri, Marilisa;
- Zhu, Shanshan;
- Schuierer, Sven;
- Ruchti, Alexandra;
- Crochemore, Christophe;
- Knehr, Judith;
- Bastien, Julie;
- Ksiazek, Iwona;
- Sánchez-Taltavull, Daniel;
- Ge, Hui;
- Wu, Jing;
- Roma, Guglielmo;
- Helliwell, Stephen B.;
- Stroka, Deborah;
- Nigsch, Florian
Publication type:
Article
A comparative transcriptomic analysis of replicating and dormant liver stages of the relapsing malaria parasite Plasmodium cynomolgi.
Published in:
eLife, 2017, p. 1, doi. 10.7554/eLife.29605
By:
- der Wel, Annemarie Voorberg-van;
- Roma, Guglielmo;
- Gupta, Devendra Kumar;
- Schuierer, Sven;
- Nigsch, Florian;
- Carbone, Walter;
- Zeeman, Anne-Marie;
- Boon Heng Lee;
- Hofman, Sam O.;
- Faber, Bart W.;
- Knehr, Judith;
- Pasini, Erica;
- Kinzel, Bernd;
- Bifani, Pablo;
- Bonamy, Ghislain M. C.;
- Bouwmeester, Tewis;
- Kocken, Clemens H. M.;
- Diagana, Thierry Tidiane
Publication type:
Article
The exon quantification pipeline (EQP): a comprehensive approach to the quantification of gene, exon and junction expression from RNA-seq data.
Published in:
Nucleic Acids Research, 2016, v. 44, n. 16, p. 1, doi. 10.1093/nar/gkw538
By:
- Schuierer, Sven;
- Roma, Guglielmo
Publication type:
Article
Fast and highly sensitive full-length single-cell RNA sequencing using FLASH-seq.
Published in:
Nature Biotechnology, 2022, v. 40, n. 10, p. 1447, doi. 10.1038/s41587-022-01312-3
By:
- Hahaut, Vincent;
- Pavlinic, Dinko;
- Carbone, Walter;
- Schuierer, Sven;
- Balmer, Pierre;
- Quinodoz, Mathieu;
- Renner, Magdalena;
- Roma, Guglielmo;
- Cowan, Cameron S.;
- Picelli, Simone
Publication type:
Article
Identification of a novel NAMPT inhibitor by CRISPR/Cas9 chemogenomic profiling in mammalian cells.
Published in:
Scientific Reports, 2017, p. 42728, doi. 10.1038/srep42728
By:
- Estoppey, David;
- Hewett, Jeffrey W.;
- Guy, Chantale T.;
- Harrington, Edmund;
- Thomas, Jason R.;
- Schirle, Markus;
- Cuttat, Rachel;
- Waldt, Annick;
- Gerrits, Bertran;
- Yang, Zinger;
- Schuierer, Sven;
- Pan, Xuewen;
- Xie, Kevin;
- Carbone, Walter;
- Knehr, Judith;
- Lindeman, Alicia;
- Russ, Carsten;
- Frias, Elizabeth;
- Hoffman, Gregory R.;
- Varadarajan, Malini
Publication type:
Article
Identification of oncogenic driver mutations by genome-wide CRISPR-Cas9 dropout screening.
Published in:
BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-3042-2
By:
- Kiessling, Michael K.;
- Schuierer, Sven;
- Stertz, Silke;
- Beibel, Martin;
- Bergling, Sebastian;
- Knehr, Judith;
- Carbone, Walter;
- de Vallière, Cheryl;
- Tchinda, Joelle;
- Bouwmeester, Tewis;
- Seuwen, Klaus;
- Rogler, Gerhard;
- Roma, Guglielmo
Publication type:
Article
Lower Bounds for Streets and Generalized Streets.
Published in:
International Journal of Computational Geometry & Applications, 2001, v. 11, n. 4, p. 401, doi. 10.1142/S0218195901000559
By:
- López-Ortiz, Alejandro;
- Schuierer, Sven;
- Mehlhorn, K.
Publication type:
Article
AN OPTIMAL DATA STRUCTURE FOR SHORTEST RECTILINEAR PATH QUERIES IN A SIMPLE RECTILINEAR POLYGON.
Published in:
International Journal of Computational Geometry & Applications, 1996, v. 6, n. 2, p. 205, doi. 10.1142/S0218195996000149
By:
- SCHUIERER, SVEN
Publication type:
Article
Transcriptional profiling of hepatocytes infected with the replicative form of the malaria parasite Plasmodium cynomolgi.
Published in:
Malaria Journal, 2022, v. 21, n. 1, p. 1, doi. 10.1186/s12936-022-04411-3
By:
- Mitchell, Gabriel;
- Roma, Guglielmo;
- Voorberg-van der Wel, Annemarie;
- Beibel, Martin;
- Zeeman, Anne-Marie;
- Schuierer, Sven;
- Torres, Laura;
- Flannery, Erika L.;
- Kocken, Clemens H. M.;
- Mikolajczak, Sebastian A.;
- Diagana, Thierry T.
Publication type:
Article
A comprehensive assessment of RNA-seq protocols for degraded and low-quantity samples.
Published in:
BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3827-y
By:
- Schuierer, Sven;
- Carbone, Walter;
- Knehr, Judith;
- Petitjean, Virginie;
- Fernandez, Anita;
- Sultan, Marc;
- Roma, Guglielmo
Publication type:
Article
Molecular characterization of chronic cutaneous wounds reveals subregion‐ and wound type‐specific differential gene expression.
Published in:
International Wound Journal, 2024, v. 21, n. 4, p. 1, doi. 10.1111/iwj.14447
By:
- Richards, Shola Michelle;
- Gubser Keller, Caroline;
- Kreutzer, Robert;
- Greiner, Géraldine;
- Ley, Svenja;
- Doelemeyer, Arno;
- Dubost, Valerie;
- Flandre, Thierry;
- Kirkland, Susan;
- Carbone, Walter;
- Pandya, Rishika;
- Knehr, Judith;
- Roma, Guglielmo;
- Schuierer, Sven;
- Bouchez, Laure;
- Seuwen, Klaus;
- Aebi, Alexandra;
- Westhead, David;
- Hintzen, Gabriele;
- Jurisic, Giorgia
Publication type:
Article
A Simple and Efficient CRISPR Technique for Protein Tagging.
Published in:
Cells (2073-4409), 2020, v. 9, n. 12, p. 2618, doi. 10.3390/cells9122618
By:
- Zeng, Fanning;
- Beck, Valerie;
- Schuierer, Sven;
- Garnier, Isabelle;
- Manneville, Carole;
- Agarinis, Claudia;
- Morelli, Lapo;
- Quinn, Lisa;
- Knehr, Judith;
- Roma, Guglielmo;
- Bassilana, Frederic;
- Nash, Mark
Publication type:
Article
MULTIPLE-GUARD KERNELS OF SIMPLE POLYGONS.
Published in:
Journal of Geometry, 1999, v. 66, n. 1/2, p. 161, doi. 10.1007/BF01225680
By:
- Schuierer, Sven;
- Wood, Derick
Publication type:
Article
Visibility in semi-convex spaces.
Published in:
Journal of Geometry, 1997, v. 60, n. 1/2, p. 160, doi. 10.1007/BF01252225
By:
- Schuierer, Sven;
- Wood, Derick
Publication type:
Article
CellSIUS provides sensitive and specific detection of rare cell populations from complex single-cell RNA-seq data.
Published in:
Genome Biology, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s13059-019-1739-7
By:
- Wegmann, Rebekka;
- Neri, Marilisa;
- Schuierer, Sven;
- Bilican, Bilada;
- Hartkopf, Huyen;
- Nigsch, Florian;
- Mapa, Felipa;
- Waldt, Annick;
- Cuttat, Rachel;
- Salick, Max R.;
- Raymond, Joe;
- Kaykas, Ajamete;
- Roma, Guglielmo;
- Keller, Caroline Gubser
Publication type:
Article
Large-scale benchmark of Endeavour using MetaCore maps.
Published in:
Bioinformatics, 2010, v. 26, n. 15, p. 1922, doi. 10.1093/bioinformatics/btq307
By:
- Schuierer, Sven;
- Tranchevent, Léon-Charles;
- Dengler, Uwe;
- Moreau, Yves
Publication type:
Article
Author Correction: Jawsamycin exhibits in vivo antifungal properties by inhibiting Spt14/Gpi3-mediated biosynthesis of glycosylphosphatidylinositol.
Published in:
2020
By:
- Fu, Yue;
- Estoppey, David;
- Roggo, Silvio;
- Pistorius, Dominik;
- Fuchs, Florian;
- Studer, Christian;
- Ibrahim, Ashraf S.;
- Aust, Thomas;
- Grandjean, Frederic;
- Mihalic, Manuel;
- Memmert, Klaus;
- Prindle, Vivian;
- Richard, Etienne;
- Riedl, Ralph;
- Schuierer, Sven;
- Weber, Eric;
- Hunziker, Jürg;
- Petersen, Frank;
- Tao, Jianshi;
- Hoepfner, Dominic
Publication type:
Correction Notice
Jawsamycin exhibits in vivo antifungal properties by inhibiting Spt14/Gpi3-mediated biosynthesis of glycosylphosphatidylinositol.
Published in:
Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-17221-5
By:
- Fu, Yue;
- Estoppey, David;
- Roggo, Silvio;
- Pistorius, Dominik;
- Fuchs, Florian;
- Studer, Christian;
- Ibrahim, Ashraf S.;
- Aust, Thomas;
- Grandjean, Frederic;
- Mihalic, Manuel;
- Memmert, Klaus;
- Prindle, Vivian;
- Richard, Etienne;
- Riedl, Ralph;
- Schuierer, Sven;
- Weber, Eric;
- Hunziker, Jürg;
- Petersen, Frank;
- Tao, Jianshi;
- Hoepfner, Dominic
Publication type:
Article

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